RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 ACEP12821 1306 aa24.95■■□□□ 1.59
MRPL28-207ENST00000461550 CRYBG1Q9Y4K1 1723 aa24.95■■□□□ 1.58
MRPL28-207ENST00000461550 PCGF6Q9BYE7 350 aa24.95■■□□□ 1.58
MRPL28-207ENST00000461550 POLR3AO14802 1390 aaPredicted RBP24.94■■□□□ 1.58
MRPL28-207ENST00000461550 PPIP5K1Q6PFW1 1433 aa24.94■■□□□ 1.58
MRPL28-207ENST00000461550 UNC5CLQ8IV45 518 aa24.92■■□□□ 1.58
MRPL28-207ENST00000461550 PLEKHG3A1L390 1219 aa24.91■■□□□ 1.58
MRPL28-207ENST00000461550 NUTM2GQ5VZR2 741 aa24.9■■□□□ 1.58
MRPL28-207ENST00000461550 UPF1Q92900 1129 aaKnown RBP eCLIP24.9■■□□□ 1.583e-25■■■■■ 56.4
MRPL28-207ENST00000461550 NWD2Q9ULI1 1742 aa24.9■■□□□ 1.58
MRPL28-207ENST00000461550 FAM83GA6ND36 823 aa24.89■■□□□ 1.58
MRPL28-207ENST00000461550 GJD4Q96KN9 370 aaPredicted RBP24.89■■□□□ 1.58
MRPL28-207ENST00000461550 GLI3P10071 1580 aa24.89■■□□□ 1.58
MRPL28-207ENST00000461550 RALGAPBQ86X10 1494 aa24.88■■□□□ 1.57
MRPL28-207ENST00000461550 PHRF1Q9P1Y6 1649 aaKnown RBP24.87■■□□□ 1.57
MRPL28-207ENST00000461550 EVC2Q86UK5 1308 aa24.87■■□□□ 1.57
MRPL28-207ENST00000461550 CARD11Q9BXL7 1154 aa24.87■■□□□ 1.57
MRPL28-207ENST00000461550 CABP1Q9NZU7 370 aa24.85■■□□□ 1.57
MRPL28-207ENST00000461550 COL14A1Q05707 1796 aaKnown RBP24.85■■□□□ 1.57
MRPL28-207ENST00000461550 NRAPQ86VF7 1730 aa24.85■■□□□ 1.57
MRPL28-207ENST00000461550 CCDC9Q9Y3X0 531 aaKnown RBP24.83■■□□□ 1.57
MRPL28-207ENST00000461550 BTG4Q9NY30 223 aa24.82■■□□□ 1.56
MRPL28-207ENST00000461550 EP400Q96L91 3159 aa24.81■■□□□ 1.56
MRPL28-207ENST00000461550 VPS72Q15906 364 aa24.81■■□□□ 1.56
MRPL28-207ENST00000461550 ABTB2Q8N961 1025 aa24.81■■□□□ 1.56
MRPL28-207ENST00000461550 PRDM11Q9NQV5 511 aa24.8■■□□□ 1.56
MRPL28-207ENST00000461550 KIAA0232Q92628 1395 aa24.8■■□□□ 1.56
MRPL28-207ENST00000461550 USP6P35125 1406 aa24.79■■□□□ 1.56
MRPL28-207ENST00000461550 NRKQ7Z2Y5 1582 aa24.79■■□□□ 1.56
MRPL28-207ENST00000461550 BRWD3Q6RI45 1802 aa24.78■■□□□ 1.56
MRPL28-207ENST00000461550 ATAD2Q6PL18 1390 aa24.78■■□□□ 1.56
MRPL28-207ENST00000461550 ZC3H6P61129 1189 aaKnown RBP24.78■■□□□ 1.56
MRPL28-207ENST00000461550 CHRNA2Q15822 529 aa24.78■■□□□ 1.56
MRPL28-207ENST00000461550 AKAP12Q02952 1782 aa24.76■■□□□ 1.55
MRPL28-207ENST00000461550 SBNO2Q9Y2G9 1366 aa24.75■■□□□ 1.55
MRPL28-207ENST00000461550 USP19O94966 1318 aa24.74■■□□□ 1.55
MRPL28-207ENST00000461550 PIK3C2AO00443 1686 aa24.73■■□□□ 1.55
MRPL28-207ENST00000461550 SEPT12Q8IYM1 358 aa24.72■■□□□ 1.55
MRPL28-207ENST00000461550 NLRP13Q86W25 1043 aa24.71■■□□□ 1.55
MRPL28-207ENST00000461550 BRD4O60885 1362 aaPredicted RBP24.71■■□□□ 1.55
MRPL28-207ENST00000461550 SSH2Q76I76 1423 aa24.71■■□□□ 1.55
MRPL28-207ENST00000461550 A0A0G2JS52 829 aa24.7■■□□□ 1.54
MRPL28-207ENST00000461550 MYT1Q01538 1121 aa24.7■■□□□ 1.54
MRPL28-207ENST00000461550 FAM98CQ17RN3 349 aaKnown RBP24.7■■□□□ 1.54
MRPL28-207ENST00000461550 NLRP6P59044 892 aa24.69■■□□□ 1.54
MRPL28-207ENST00000461550 STRN4Q9NRL3 753 aa24.69■■□□□ 1.54
MRPL28-207ENST00000461550 GCP02774 474 aa24.68■■□□□ 1.54
MRPL28-207ENST00000461550 CPSF1Q10570 1443 aaKnown RBP24.67■■□□□ 1.54
MRPL28-207ENST00000461550 SPATA31A5Q5VU36 1347 aa24.67■■□□□ 1.54
MRPL28-207ENST00000461550 SPATA31A7Q8IWB4 1347 aa24.67■■□□□ 1.54
MRPL28-207ENST00000461550 MON2Q7Z3U7 1717 aa24.67■■□□□ 1.54
MRPL28-207ENST00000461550 KTN1Q86UP2 1357 aaKnown RBP24.66■■□□□ 1.54
MRPL28-207ENST00000461550 TTC21BQ7Z4L5 1316 aa24.66■■□□□ 1.54
MRPL28-207ENST00000461550 ST20-MTHFSA0A0A6YYL1 179 aa24.66■■□□□ 1.54
MRPL28-207ENST00000461550 ONECUT3O60422 494 aaPredicted RBP24.66■■□□□ 1.54
MRPL28-207ENST00000461550 LMO7Q8WWI1 1683 aa24.66■■□□□ 1.54
MRPL28-207ENST00000461550 CAMTA1Q9Y6Y1 1673 aa24.66■■□□□ 1.54
MRPL28-207ENST00000461550 CPDO75976 1380 aa24.66■■□□□ 1.54
MRPL28-207ENST00000461550 ZBTB7CA1YPR0 619 aa24.65■■□□□ 1.54
MRPL28-207ENST00000461550 ZNF692Q9BU19 519 aaPredicted RBP24.65■■□□□ 1.54
MRPL28-207ENST00000461550 SLIT3O75094 1523 aa24.65■■□□□ 1.54
MRPL28-207ENST00000461550 TMC1Q8TDI8 760 aa24.64■■□□□ 1.54
MRPL28-207ENST00000461550 CD163L1Q9NR16 1453 aa24.63■■□□□ 1.53
MRPL28-207ENST00000461550 TESK2Q96S53 571 aa24.63■■□□□ 1.53
MRPL28-207ENST00000461550 SLC12A5Q9H2X9 1139 aa24.62■■□□□ 1.53
MRPL28-207ENST00000461550 SPATA31A1Q5TZJ5 1347 aa24.61■■□□□ 1.53
MRPL28-207ENST00000461550 EVA1CP58658 441 aa24.61■■□□□ 1.53
MRPL28-207ENST00000461550 KRT27Q7Z3Y8 459 aa24.61■■□□□ 1.53
MRPL28-207ENST00000461550 USP35Q9P2H5 1018 aa24.61■■□□□ 1.53
MRPL28-207ENST00000461550 THSD7AQ9UPZ6 1657 aa24.61■■□□□ 1.53
MRPL28-207ENST00000461550 SOX12O15370 315 aa24.6■■□□□ 1.53
MRPL28-207ENST00000461550 TTC21AQ8NDW8 1320 aa24.6■■□□□ 1.53
MRPL28-207ENST00000461550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.59■■□□□ 1.53
MRPL28-207ENST00000461550 USP47Q96K76 1375 aa24.59■■□□□ 1.53
MRPL28-207ENST00000461550 LARP1Q6PKG0 1096 aaKnown RBP24.58■■□□□ 1.53
MRPL28-207ENST00000461550 CLSPNQ9HAW4 1339 aa24.58■■□□□ 1.53
MRPL28-207ENST00000461550 ZRANB1Q9UGI0 708 aa24.58■■□□□ 1.52
MRPL28-207ENST00000461550 COL5A2P05997 1499 aaPredicted RBP24.57■■□□□ 1.52
MRPL28-207ENST00000461550 FAM182BQ5T319 152 aa24.56■■□□□ 1.52
MRPL28-207ENST00000461550 A0A1W2PP64 1363 aa24.55■■□□□ 1.52
MRPL28-207ENST00000461550 COL18A1P39060 1754 aa24.55■■□□□ 1.52
MRPL28-207ENST00000461550 HDGFL2Q7Z4V5 671 aaPredicted RBP24.55■■□□□ 1.52
MRPL28-207ENST00000461550 BLMP54132 1417 aaPredicted RBP24.54■■□□□ 1.52
MRPL28-207ENST00000461550 NME9Q86XW9 330 aa24.54■■□□□ 1.52
MRPL28-207ENST00000461550 AATKQ6ZMQ8 1374 aa24.54■■□□□ 1.52
MRPL28-207ENST00000461550 RGPD5Q99666 1765 aa24.53■■□□□ 1.52
MRPL28-207ENST00000461550 CCDC125Q86Z20 511 aa24.53■■□□□ 1.52
MRPL28-207ENST00000461550 CCER1Q8TC90 406 aaPredicted RBP24.53■■□□□ 1.52
MRPL28-207ENST00000461550 NFAT5O94916 1531 aa24.53■■□□□ 1.52
MRPL28-207ENST00000461550 PUS7Q96PZ0 661 aaKnown RBP24.52■■□□□ 1.52
MRPL28-207ENST00000461550 TIMELESSQ9UNS1 1208 aa24.52■■□□□ 1.52
MRPL28-207ENST00000461550 TERF2IPQ9NYB0 399 aa24.51■■□□□ 1.51
MRPL28-207ENST00000461550 USP54Q70EL1 1684 aa24.51■■□□□ 1.51
MRPL28-207ENST00000461550 EDC4Q6P2E9 1401 aaKnown RBP24.51■■□□□ 1.51
MRPL28-207ENST00000461550 KCNH5Q8NCM2 988 aa24.51■■□□□ 1.51
MRPL28-207ENST00000461550 AXIN2Q9Y2T1 843 aa24.51■■□□□ 1.51
MRPL28-207ENST00000461550 ARHGEF25Q86VW2 580 aa24.5■■□□□ 1.51
MRPL28-207ENST00000461550 DEFB132Q7Z7B7 95 aa24.49■■□□□ 1.51
MRPL28-207ENST00000461550 TCP11L2Q8N4U5 519 aa24.49■■□□□ 1.51
MRPL28-207ENST00000461550 BARGINQ6ZT62 677 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms