RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 UPP2O95045 317 aa9.86□□□□□ -0.83
CCT4-203ENST00000461540 MS4A1P11836 297 aa9.86□□□□□ -0.83
CCT4-203ENST00000461540 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
CCT4-203ENST00000461540 GPR161Q8N6U8 529 aaKnown RBP9.86□□□□□ -0.83
CCT4-203ENST00000461540 KLF16Q9BXK1 252 aaPredicted RBP9.86□□□□□ -0.83
CCT4-203ENST00000461540 BMP2P12643 396 aa9.85□□□□□ -0.83
CCT4-203ENST00000461540 MARSP56192 900 aaKnown RBP9.85□□□□□ -0.83
CCT4-203ENST00000461540 ZIC2O95409 532 aaPredicted RBP9.84□□□□□ -0.83
CCT4-203ENST00000461540 ZNF511Q8NB15 262 aa9.84□□□□□ -0.83
CCT4-203ENST00000461540 COL25A1Q9BXS0 654 aaPredicted RBP9.83□□□□□ -0.84
CCT4-203ENST00000461540 ZFAND3Q9H8U3 227 aa9.83□□□□□ -0.84
CCT4-203ENST00000461540 SCARF2Q96GP6 870 aaPredicted RBP9.82□□□□□ -0.84
CCT4-203ENST00000461540 EVA1BQ9NVM1 165 aa9.82□□□□□ -0.84
CCT4-203ENST00000461540 PTPRNQ16849 979 aa9.81□□□□□ -0.84
CCT4-203ENST00000461540 FAM174AQ8TBP5 190 aa9.81□□□□□ -0.84
CCT4-203ENST00000461540 ITPKCQ96DU7 683 aa9.81□□□□□ -0.84
CCT4-203ENST00000461540 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
CCT4-203ENST00000461540 TESPA1A2RU30 521 aaPredicted RBP9.8□□□□□ -0.84
CCT4-203ENST00000461540 ADAM23O75077 832 aa9.8□□□□□ -0.84
CCT4-203ENST00000461540 LINC00528Q8N1L1 170 aa9.8□□□□□ -0.84
CCT4-203ENST00000461540 KRTAP4-8Q9BYQ9 185 aa9.8□□□□□ -0.84
CCT4-203ENST00000461540 DNMT3LQ9UJW3 386 aa9.8□□□□□ -0.84
CCT4-203ENST00000461540 C6orf229H3BNL8 230 aa9.79□□□□□ -0.84
CCT4-203ENST00000461540 KCNH2Q12809 1159 aa9.79□□□□□ -0.84
CCT4-203ENST00000461540 SOS2Q07890 1332 aaPredicted RBP9.79□□□□□ -0.84
CCT4-203ENST00000461540 ARHGEF15O94989 841 aa9.78□□□□□ -0.84
CCT4-203ENST00000461540 ARID5BQ14865 1188 aa9.78□□□□□ -0.84
CCT4-203ENST00000461540 TSHZ2Q9NRE2 1034 aa9.78□□□□□ -0.84
CCT4-203ENST00000461540 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.77□□□□□ -0.85
CCT4-203ENST00000461540 WHAMMQ8TF30 809 aa9.77□□□□□ -0.85
CCT4-203ENST00000461540 MSTNO14793 375 aa9.76□□□□□ -0.85
CCT4-203ENST00000461540 MDM2Q00987 491 aaPredicted RBP9.76□□□□□ -0.85
CCT4-203ENST00000461540 NR5A1Q13285 461 aa9.76□□□□□ -0.85
CCT4-203ENST00000461540 CDK15Q96Q40 435 aa9.76□□□□□ -0.85
CCT4-203ENST00000461540 SLURP2P0DP57 97 aa9.75□□□□□ -0.85
CCT4-203ENST00000461540 RNFT1Q5M7Z0 435 aa9.75□□□□□ -0.85
CCT4-203ENST00000461540 NUTM1Q86Y26 1132 aa9.75□□□□□ -0.85
CCT4-203ENST00000461540 MEIOBQ8N635 442 aa9.75□□□□□ -0.85
CCT4-203ENST00000461540 NANOS1Q8WY41 292 aaKnown RBP9.75□□□□□ -0.85
CCT4-203ENST00000461540 SPTLC1O15269 473 aa9.74□□□□□ -0.85
CCT4-203ENST00000461540 FDX1P10109 184 aa9.74□□□□□ -0.85
CCT4-203ENST00000461540 PTSQ03393 145 aa9.74□□□□□ -0.85
CCT4-203ENST00000461540 NR3C2P08235 984 aa9.72□□□□□ -0.85
CCT4-203ENST00000461540 GPIHBP1Q8IV16 184 aa9.72□□□□□ -0.85
CCT4-203ENST00000461540 TTLL8A6PVC2 850 aa9.7□□□□□ -0.86
CCT4-203ENST00000461540 CCDC155Q8N6L0 562 aa9.7□□□□□ -0.86
CCT4-203ENST00000461540 TSEN34Q9BSV6 310 aaKnown RBP9.7□□□□□ -0.86
CCT4-203ENST00000461540 PCDHGC3Q9UN70 934 aa9.7□□□□□ -0.86
CCT4-203ENST00000461540 PLA2G4EQ3MJ16 856 aa9.69□□□□□ -0.86
CCT4-203ENST00000461540 SPOCK3Q9BQ16 436 aa9.69□□□□□ -0.86
CCT4-203ENST00000461540 MAP3K10Q02779 954 aa9.68□□□□□ -0.86
CCT4-203ENST00000461540 MAP2K5Q13163 448 aa9.68□□□□□ -0.86
CCT4-203ENST00000461540 PSMG3-AS1Q96PY0 264 aa9.68□□□□□ -0.86
CCT4-203ENST00000461540 CDC14CA4D256 554 aa9.67□□□□□ -0.86
CCT4-203ENST00000461540 CTHP32929 405 aa9.67□□□□□ -0.86
CCT4-203ENST00000461540 PRR7Q8TB68 274 aa9.67□□□□□ -0.86
CCT4-203ENST00000461540 GRM5P41594 1212 aa9.66□□□□□ -0.86
CCT4-203ENST00000461540 AGERQ15109 404 aa9.66□□□□□ -0.86
CCT4-203ENST00000461540 SV2AQ7L0J3 742 aa9.66□□□□□ -0.86
CCT4-203ENST00000461540 VWA5B2Q8N398 1253 aa9.66□□□□□ -0.86
CCT4-203ENST00000461540 GALNT6Q8NCL4 622 aa9.66□□□□□ -0.86
CCT4-203ENST00000461540 FOXJ1Q92949 421 aa9.66□□□□□ -0.86
CCT4-203ENST00000461540 FIGNL2A6NMB9 653 aa9.65□□□□□ -0.86
CCT4-203ENST00000461540 DESI1Q6ICB0 168 aa9.65□□□□□ -0.86
CCT4-203ENST00000461540 GPCPD1Q9NPB8 672 aa9.64□□□□□ -0.87
CCT4-203ENST00000461540 ENAMQ9NRM1 1142 aa9.64□□□□□ -0.87
CCT4-203ENST00000461540 FAM217BQ9NTX9 383 aaPredicted RBP9.64□□□□□ -0.87
CCT4-203ENST00000461540 PHF20L1A8MW92 1017 aa9.63□□□□□ -0.87
CCT4-203ENST00000461540 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.63□□□□□ -0.87
CCT4-203ENST00000461540 IRF6O14896 467 aa9.63□□□□□ -0.87
CCT4-203ENST00000461540 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
CCT4-203ENST00000461540 ITGA6P23229 1130 aa9.63□□□□□ -0.87
CCT4-203ENST00000461540 LYPD4Q6UWN0 246 aa9.63□□□□□ -0.87
CCT4-203ENST00000461540 DCAF5Q96JK2 942 aa9.63□□□□□ -0.87
CCT4-203ENST00000461540 CLCN1P35523 988 aa9.62□□□□□ -0.87
CCT4-203ENST00000461540 SLC35F4A4IF30 521 aa9.61□□□□□ -0.87
CCT4-203ENST00000461540 SPDYE5A6NIY4 337 aa9.61□□□□□ -0.87
CCT4-203ENST00000461540 K7ELQ4 463 aaPredicted RBP9.61□□□□□ -0.87
CCT4-203ENST00000461540 Q8N3U1 123 aa9.61□□□□□ -0.87
CCT4-203ENST00000461540 KRTAP9-2Q9BYQ4 174 aa9.61□□□□□ -0.87
CCT4-203ENST00000461540 MTMR2Q13614 643 aa9.6□□□□□ -0.87
CCT4-203ENST00000461540 BPHLQ86WA6 291 aaPredicted RBP9.6□□□□□ -0.87
CCT4-203ENST00000461540 EMILIN1Q9Y6C2 1016 aa9.6□□□□□ -0.87
CCT4-203ENST00000461540 PROCP04070 461 aa9.59□□□□□ -0.87
CCT4-203ENST00000461540 FSHRP23945 695 aa9.59□□□□□ -0.87
CCT4-203ENST00000461540 SRSF11Q05519 484 aaKnown RBP9.59□□□□□ -0.87
CCT4-203ENST00000461540 CELA2BP08218 269 aaPredicted RBP9.58□□□□□ -0.88
CCT4-203ENST00000461540 C4orf48Q5BLP8 95 aa9.58□□□□□ -0.88
CCT4-203ENST00000461540 KRI1Q8N9T8 703 aaKnown RBP9.58□□□□□ -0.88
CCT4-203ENST00000461540 KRTAP9-6A0A140TA67 174 aa9.57□□□□□ -0.88
CCT4-203ENST00000461540 ITGB2P05107 769 aa9.57□□□□□ -0.88
CCT4-203ENST00000461540 NDUFV2P19404 249 aa9.57□□□□□ -0.88
CCT4-203ENST00000461540 LYPD8Q6UX82 237 aa9.57□□□□□ -0.88
CCT4-203ENST00000461540 BEND7Q8N7W2 519 aaPredicted RBP9.57□□□□□ -0.88
CCT4-203ENST00000461540 PODNQ7Z5L7 613 aa9.56□□□□□ -0.88
CCT4-203ENST00000461540 CNTNAP5Q8WYK1 1306 aa9.56□□□□□ -0.88
CCT4-203ENST00000461540 SPINT1O43278 529 aa9.55□□□□□ -0.88
CCT4-203ENST00000461540 VASH1Q7L8A9 365 aaPredicted RBP9.55□□□□□ -0.88
CCT4-203ENST00000461540 CCDC116Q8IYX3 515 aa9.55□□□□□ -0.88
CCT4-203ENST00000461540 SPIRE2Q8WWL2 714 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms