RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 CRIPAKQ8N1N5 446 aa10.25□□□□□ -0.77
UBA3-204ENST00000461522 TSC1Q92574 1164 aa10.25□□□□□ -0.77
UBA3-204ENST00000461522 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.25□□□□□ -0.77
UBA3-204ENST00000461522 MAP10Q9P2G4 905 aa10.25□□□□□ -0.77
UBA3-204ENST00000461522 LINC01559Q495D7 138 aa10.24□□□□□ -0.77
UBA3-204ENST00000461522 ZNF511Q8NB15 262 aa10.24□□□□□ -0.77
UBA3-204ENST00000461522 PROCA1Q8NCQ7 364 aaPredicted RBP10.24□□□□□ -0.77
UBA3-204ENST00000461522 HELBQ8NG08 1087 aaPredicted RBP10.24□□□□□ -0.77
UBA3-204ENST00000461522 J3QL48 77 aa10.23□□□□□ -0.77
UBA3-204ENST00000461522 SIAH2O43255 324 aa10.23□□□□□ -0.77
UBA3-204ENST00000461522 TPRNQ4KMQ1 711 aa10.23□□□□□ -0.77
UBA3-204ENST00000461522 EHBP1Q8NDI1 1231 aa10.23□□□□□ -0.77
UBA3-204ENST00000461522 AAASQ9NRG9 546 aa10.23□□□□□ -0.77
UBA3-204ENST00000461522 ST8SIA5O15466 376 aa10.22□□□□□ -0.77
UBA3-204ENST00000461522 NEUROD2Q15784 382 aa10.22□□□□□ -0.77
UBA3-204ENST00000461522 FBXO31Q5XUX0 539 aaPredicted RBP10.22□□□□□ -0.77
UBA3-204ENST00000461522 CTC1Q2NKJ3 1217 aa10.21□□□□□ -0.77
UBA3-204ENST00000461522 PPP2R2DQ66LE6 453 aa10.21□□□□□ -0.77
UBA3-204ENST00000461522 SMCPP49901 116 aaPredicted RBP10.2□□□□□ -0.78
UBA3-204ENST00000461522 BRPF1P55201 1214 aaPredicted RBP10.2□□□□□ -0.78
UBA3-204ENST00000461522 VARSP26640 1264 aaKnown RBP10.18□□□□□ -0.78
UBA3-204ENST00000461522 CTDSPL2Q05D32 466 aa10.18□□□□□ -0.78
UBA3-204ENST00000461522 ZNF787Q6DD87 383 aa10.18□□□□□ -0.78
UBA3-204ENST00000461522 GOPCQ9HD26 462 aa10.18□□□□□ -0.78
UBA3-204ENST00000461522 AXIN1O15169 862 aa10.17□□□□□ -0.78
UBA3-204ENST00000461522 ALDH1A1P00352 501 aa10.17□□□□□ -0.78
UBA3-204ENST00000461522 HPS1Q92902 700 aa10.17□□□□□ -0.78
UBA3-204ENST00000461522 MPNDQ8N594 471 aa10.15□□□□□ -0.78
UBA3-204ENST00000461522 ARMC2Q8NEN0 867 aa10.15□□□□□ -0.78
UBA3-204ENST00000461522 FOXJ1Q92949 421 aa10.15□□□□□ -0.78
UBA3-204ENST00000461522 DACH1Q9UI36 760 aa10.15□□□□□ -0.78
UBA3-204ENST00000461522 IL27Q8NEV9 243 aa10.14□□□□□ -0.79
UBA3-204ENST00000461522 ATP1B4Q9UN42 357 aaPredicted RBP10.14□□□□□ -0.79
UBA3-204ENST00000461522 TLL2Q9Y6L7 1015 aa10.14□□□□□ -0.79
UBA3-204ENST00000461522 POTECB2RU33 542 aa10.13□□□□□ -0.79
UBA3-204ENST00000461522 LRRN4Q8WUT4 740 aa10.13□□□□□ -0.79
UBA3-204ENST00000461522 C4orf48Q5BLP8 95 aa10.12□□□□□ -0.79
UBA3-204ENST00000461522 FAM174AQ8TBP5 190 aa10.12□□□□□ -0.79
UBA3-204ENST00000461522 NBPF14Q5TI25 921 aa10.11□□□□□ -0.79
UBA3-204ENST00000461522 BPHLQ86WA6 291 aaPredicted RBP10.11□□□□□ -0.79
UBA3-204ENST00000461522 PCMTD1Q96MG8 357 aaPredicted RBP10.11□□□□□ -0.79
UBA3-204ENST00000461522 WASF2Q9Y6W5 498 aa10.11□□□□□ -0.79
UBA3-204ENST00000461522 AP1G2O75843 785 aa10.1□□□□□ -0.79
UBA3-204ENST00000461522 RFC5P40937 340 aa10.1□□□□□ -0.79
UBA3-204ENST00000461522 SH3RF1Q7Z6J0 888 aa10.1□□□□□ -0.79
UBA3-204ENST00000461522 GPKOWQ92917 476 aaPredicted RBP eCLIP10.1□□□□□ -0.79
UBA3-204ENST00000461522 SH3BP5LQ7L8J4 393 aa10.09□□□□□ -0.79
UBA3-204ENST00000461522 CDK15Q96Q40 435 aa10.09□□□□□ -0.79
UBA3-204ENST00000461522 AGERQ15109 404 aa10.08□□□□□ -0.8
UBA3-204ENST00000461522 C1QTNF2Q9BXJ5 285 aa10.08□□□□□ -0.8
UBA3-204ENST00000461522 USP17L8P0C7I0 530 aa10.07□□□□□ -0.8
UBA3-204ENST00000461522 NR6A1Q15406 480 aa10.07□□□□□ -0.8
UBA3-204ENST00000461522 ATP13A2Q9NQ11 1180 aa10.07□□□□□ -0.8
UBA3-204ENST00000461522 GMPR2Q9P2T1 348 aaKnown RBP10.07□□□□□ -0.8
UBA3-204ENST00000461522 ADH1CP00326 375 aa10.06□□□□□ -0.8
UBA3-204ENST00000461522 NNTQ13423 1086 aa10.06□□□□□ -0.8
UBA3-204ENST00000461522 FKBPLQ9UIM3 349 aa10.06□□□□□ -0.8
UBA3-204ENST00000461522 HMX1Q9NP08 348 aaPredicted RBP10.05□□□□□ -0.8
UBA3-204ENST00000461522 PDXDC2PQ6P474 469 aa10.04□□□□□ -0.8
UBA3-204ENST00000461522 TRMT44Q8IYL2 757 aaKnown RBP10.04□□□□□ -0.8
UBA3-204ENST00000461522 ZC3H4Q9UPT8 1303 aaKnown RBP10.04□□□□□ -0.8
UBA3-204ENST00000461522 CAPN5O15484 640 aaPredicted RBP10.03□□□□□ -0.8
UBA3-204ENST00000461522 ARID5BQ14865 1188 aa10.03□□□□□ -0.8
UBA3-204ENST00000461522 TMEM259Q4ZIN3 620 aa10.03□□□□□ -0.8
UBA3-204ENST00000461522 EPS8L1Q8TE68 723 aa10.03□□□□□ -0.8
UBA3-204ENST00000461522 MAGEB6P1A0A0J9YX57 407 aa10.02□□□□□ -0.81
UBA3-204ENST00000461522 GRM5P41594 1212 aa10.02□□□□□ -0.81
UBA3-204ENST00000461522 ZNF775Q96BV0 537 aaPredicted RBP10.02□□□□□ -0.81
UBA3-204ENST00000461522 MAP4K5Q9Y4K4 846 aa10.02□□□□□ -0.81
UBA3-204ENST00000461522 C11orf95C9JLR9 678 aaPredicted RBP10.01□□□□□ -0.81
UBA3-204ENST00000461522 NR5A1Q13285 461 aa10.01□□□□□ -0.81
UBA3-204ENST00000461522 ERFEQ4G0M1 354 aa10.01□□□□□ -0.81
UBA3-204ENST00000461522 KLF16Q9BXK1 252 aaPredicted RBP10.01□□□□□ -0.81
UBA3-204ENST00000461522 TIMP2P16035 220 aa10□□□□□ -0.81
UBA3-204ENST00000461522 ARHGAP9Q9BRR9 750 aa10□□□□□ -0.81
UBA3-204ENST00000461522 CARD14Q9BXL6 1004 aa10□□□□□ -0.81
UBA3-204ENST00000461522 SENP2Q9HC62 589 aa10□□□□□ -0.81
UBA3-204ENST00000461522 NR3C2P08235 984 aa9.99□□□□□ -0.81
UBA3-204ENST00000461522 PRKCSHP14314 528 aaPredicted RBP9.99□□□□□ -0.81
UBA3-204ENST00000461522 TRIM47Q96LD4 638 aa9.99□□□□□ -0.81
UBA3-204ENST00000461522 OCSTAMPQ9BR26 566 aa9.99□□□□□ -0.81
UBA3-204ENST00000461522 TRIM34Q9BYJ4 488 aa9.99□□□□□ -0.81
UBA3-204ENST00000461522 WDR4P57081 412 aaKnown RBP9.98□□□□□ -0.81
UBA3-204ENST00000461522 TRIM46Q7Z4K8 759 aa9.98□□□□□ -0.81
UBA3-204ENST00000461522 GPSM3Q9Y4H4 160 aa9.98□□□□□ -0.81
UBA3-204ENST00000461522 BMP1P13497 986 aa9.97□□□□□ -0.81
UBA3-204ENST00000461522 SNRPBP14678 240 aaKnown RBP9.97□□□□□ -0.81
UBA3-204ENST00000461522 VASH1Q7L8A9 365 aaPredicted RBP9.97□□□□□ -0.81
UBA3-204ENST00000461522 PNMA1Q8ND90 353 aa9.97□□□□□ -0.81
UBA3-204ENST00000461522 KIFC2Q96AC6 838 aa9.97□□□□□ -0.81
UBA3-204ENST00000461522 FSHRP23945 695 aa9.96□□□□□ -0.82
UBA3-204ENST00000461522 PTK2Q05397 1052 aa9.96□□□□□ -0.82
UBA3-204ENST00000461522 GJD4Q96KN9 370 aaPredicted RBP9.95□□□□□ -0.82
UBA3-204ENST00000461522 ZIC2O95409 532 aaPredicted RBP9.94□□□□□ -0.82
UBA3-204ENST00000461522 ZBTB33Q86T24 672 aa9.94□□□□□ -0.82
UBA3-204ENST00000461522 ITPKCQ96DU7 683 aa9.94□□□□□ -0.82
UBA3-204ENST00000461522 BANK1Q8NDB2 785 aa9.93□□□□□ -0.82
UBA3-204ENST00000461522 ADAM32Q8TC27 787 aa9.93□□□□□ -0.82
UBA3-204ENST00000461522 SLC10A4Q96EP9 437 aa9.93□□□□□ -0.82
UBA3-204ENST00000461522 ZFAND3Q9H8U3 227 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms