RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 GLI3P10071 1580 aa33.82■■■■□ 3
LMBR1-214ENST00000461469 UPF1Q92900 1129 aaKnown RBP eCLIP33.82■■■■□ 3
LMBR1-214ENST00000461469 PLEKHG3A1L390 1219 aa33.81■■■■□ 3
LMBR1-214ENST00000461469 PAK3O75914 559 aaPredicted RBP33.81■■■■□ 3
LMBR1-214ENST00000461469 NWD2Q9ULI1 1742 aa33.8■■■■□ 3
LMBR1-214ENST00000461469 SRPK2P78362 688 aaKnown RBP33.8■■■■□ 3
LMBR1-214ENST00000461469 UNC5CLQ8IV45 518 aa33.8■■■■□ 3
LMBR1-214ENST00000461469 PPIP5K1Q6PFW1 1433 aa33.79■■■■□ 3
LMBR1-214ENST00000461469 FAM83GA6ND36 823 aa33.78■■■■□ 3
LMBR1-214ENST00000461469 GJD4Q96KN9 370 aaPredicted RBP33.77■■■■□ 3
LMBR1-214ENST00000461469 NRAPQ86VF7 1730 aa33.76■■■■□ 3
LMBR1-214ENST00000461469 TONSLQ96HA7 1378 aa33.76■■■■□ 3
LMBR1-214ENST00000461469 PHRF1Q9P1Y6 1649 aaKnown RBP33.76■■■■□ 3
LMBR1-214ENST00000461469 RALGAPBQ86X10 1494 aa33.76■■■□□ 2.99
LMBR1-214ENST00000461469 NUTM2GQ5VZR2 741 aa33.72■■■□□ 2.99
LMBR1-214ENST00000461469 COL14A1Q05707 1796 aaKnown RBP33.71■■■□□ 2.99
LMBR1-214ENST00000461469 CABP1Q9NZU7 370 aa33.68■■■□□ 2.98
LMBR1-214ENST00000461469 EVC2Q86UK5 1308 aa33.67■■■□□ 2.98
LMBR1-214ENST00000461469 BRWD3Q6RI45 1802 aa33.67■■■□□ 2.98
LMBR1-214ENST00000461469 VPS72Q15906 364 aa33.66■■■□□ 2.98
LMBR1-214ENST00000461469 CARD11Q9BXL7 1154 aa33.65■■■□□ 2.98
LMBR1-214ENST00000461469 NRKQ7Z2Y5 1582 aa33.64■■■□□ 2.98
LMBR1-214ENST00000461469 BTG4Q9NY30 223 aa33.63■■■□□ 2.97
LMBR1-214ENST00000461469 USP6P35125 1406 aa33.62■■■□□ 2.97
LMBR1-214ENST00000461469 KIAA0232Q92628 1395 aa33.61■■■□□ 2.97
LMBR1-214ENST00000461469 AKAP12Q02952 1782 aa33.6■■■□□ 2.97
LMBR1-214ENST00000461469 SSH2Q76I76 1423 aa33.6■■■□□ 2.97
LMBR1-214ENST00000461469 ABTB2Q8N961 1025 aa33.59■■■□□ 2.97
LMBR1-214ENST00000461469 SBNO2Q9Y2G9 1366 aa33.59■■■□□ 2.97
LMBR1-214ENST00000461469 USP19O94966 1318 aa33.58■■■□□ 2.97
LMBR1-214ENST00000461469 CHRNA2Q15822 529 aa33.58■■■□□ 2.97
LMBR1-214ENST00000461469 PRDM11Q9NQV5 511 aa33.58■■■□□ 2.97
LMBR1-214ENST00000461469 ATAD2Q6PL18 1390 aa33.58■■■□□ 2.97
LMBR1-214ENST00000461469 ZC3H6P61129 1189 aaKnown RBP33.57■■■□□ 2.96
LMBR1-214ENST00000461469 PIK3C2AO00443 1686 aa33.56■■■□□ 2.96
LMBR1-214ENST00000461469 CCDC9Q9Y3X0 531 aaKnown RBP33.56■■■□□ 2.96
LMBR1-214ENST00000461469 EP400Q96L91 3159 aa33.56■■■□□ 2.96
LMBR1-214ENST00000461469 SEPT12Q8IYM1 358 aa33.53■■■□□ 2.96
LMBR1-214ENST00000461469 ONECUT3O60422 494 aaPredicted RBP33.52■■■□□ 2.96
LMBR1-214ENST00000461469 BRD4O60885 1362 aaPredicted RBP33.51■■■□□ 2.96
LMBR1-214ENST00000461469 LMO7Q8WWI1 1683 aa33.51■■■□□ 2.95
LMBR1-214ENST00000461469 CPSF1Q10570 1443 aaKnown RBP33.5■■■□□ 2.95
LMBR1-214ENST00000461469 NLRP13Q86W25 1043 aa33.48■■■□□ 2.95
LMBR1-214ENST00000461469 CAMTA1Q9Y6Y1 1673 aa33.48■■■□□ 2.95
LMBR1-214ENST00000461469 SPATA31A5Q5VU36 1347 aa33.48■■■□□ 2.95
LMBR1-214ENST00000461469 SPATA31A7Q8IWB4 1347 aa33.48■■■□□ 2.95
LMBR1-214ENST00000461469 SLIT3O75094 1523 aa33.48■■■□□ 2.95
LMBR1-214ENST00000461469 MON2Q7Z3U7 1717 aa33.48■■■□□ 2.95
LMBR1-214ENST00000461469 CD163L1Q9NR16 1453 aa33.46■■■□□ 2.95
LMBR1-214ENST00000461469 GCP02774 474 aa33.46■■■□□ 2.95
LMBR1-214ENST00000461469 FAM98CQ17RN3 349 aaKnown RBP33.46■■■□□ 2.95
LMBR1-214ENST00000461469 PCGF6Q9BYE7 350 aa33.46■■■□□ 2.95
LMBR1-214ENST00000461469 CPDO75976 1380 aa33.46■■■□□ 2.95
LMBR1-214ENST00000461469 TTC21BQ7Z4L5 1316 aa33.44■■■□□ 2.94
LMBR1-214ENST00000461469 THSD7AQ9UPZ6 1657 aa33.43■■■□□ 2.94
LMBR1-214ENST00000461469 NLRP6P59044 892 aa33.43■■■□□ 2.94
LMBR1-214ENST00000461469 TESK2Q96S53 571 aa33.43■■■□□ 2.94
LMBR1-214ENST00000461469 STRN4Q9NRL3 753 aa33.42■■■□□ 2.94
LMBR1-214ENST00000461469 ST20-MTHFSA0A0A6YYL1 179 aa33.41■■■□□ 2.94
LMBR1-214ENST00000461469 ZNF692Q9BU19 519 aaPredicted RBP33.4■■■□□ 2.94
LMBR1-214ENST00000461469 SPATA31A1Q5TZJ5 1347 aa33.39■■■□□ 2.94
LMBR1-214ENST00000461469 KTN1Q86UP2 1357 aaKnown RBP33.38■■■□□ 2.93
LMBR1-214ENST00000461469 COL18A1P39060 1754 aa33.38■■■□□ 2.93
LMBR1-214ENST00000461469 KRT27Q7Z3Y8 459 aa33.37■■■□□ 2.93
LMBR1-214ENST00000461469 SLC12A5Q9H2X9 1139 aa33.37■■■□□ 2.93
LMBR1-214ENST00000461469 A0A0G2JS52 829 aa33.35■■■□□ 2.93
LMBR1-214ENST00000461469 MYT1Q01538 1121 aa33.35■■■□□ 2.93
LMBR1-214ENST00000461469 LARP1Q6PKG0 1096 aaKnown RBP33.34■■■□□ 2.93
LMBR1-214ENST00000461469 ZRANB1Q9UGI0 708 aa33.34■■■□□ 2.93
LMBR1-214ENST00000461469 COL5A2P05997 1499 aaPredicted RBP33.33■■■□□ 2.93
LMBR1-214ENST00000461469 TTC21AQ8NDW8 1320 aa33.32■■■□□ 2.93
LMBR1-214ENST00000461469 TMC1Q8TDI8 760 aa33.32■■■□□ 2.92
LMBR1-214ENST00000461469 ZBTB7CA1YPR0 619 aa33.31■■■□□ 2.92
LMBR1-214ENST00000461469 RGPD5Q99666 1765 aa33.31■■■□□ 2.92
LMBR1-214ENST00000461469 USP54Q70EL1 1684 aa33.3■■■□□ 2.92
LMBR1-214ENST00000461469 NFAT5O94916 1531 aa33.3■■■□□ 2.92
LMBR1-214ENST00000461469 FAM182BQ5T319 152 aa33.3■■■□□ 2.92
LMBR1-214ENST00000461469 USP35Q9P2H5 1018 aa33.3■■■□□ 2.92
LMBR1-214ENST00000461469 USP47Q96K76 1375 aa33.3■■■□□ 2.92
LMBR1-214ENST00000461469 BLMP54132 1417 aaPredicted RBP33.29■■■□□ 2.92
LMBR1-214ENST00000461469 EVA1CP58658 441 aa33.29■■■□□ 2.92
LMBR1-214ENST00000461469 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.29■■■□□ 2.922e-6■■□□□ 12.3
LMBR1-214ENST00000461469 CLSPNQ9HAW4 1339 aa33.28■■■□□ 2.92
LMBR1-214ENST00000461469 A0A1W2PP64 1363 aa33.28■■■□□ 2.92
LMBR1-214ENST00000461469 AATKQ6ZMQ8 1374 aa33.28■■■□□ 2.92
LMBR1-214ENST00000461469 PUS7Q96PZ0 661 aaKnown RBP33.27■■■□□ 2.92
LMBR1-214ENST00000461469 SOX12O15370 315 aa33.26■■■□□ 2.91
LMBR1-214ENST00000461469 NME9Q86XW9 330 aa33.26■■■□□ 2.91
LMBR1-214ENST00000461469 CCDC125Q86Z20 511 aa33.26■■■□□ 2.91
LMBR1-214ENST00000461469 AXIN2Q9Y2T1 843 aa33.26■■■□□ 2.91
LMBR1-214ENST00000461469 ARHGEF25Q86VW2 580 aa33.24■■■□□ 2.91
LMBR1-214ENST00000461469 USP31Q70CQ4 1352 aa33.23■■■□□ 2.91
LMBR1-214ENST00000461469 DEFB132Q7Z7B7 95 aa33.23■■■□□ 2.91
LMBR1-214ENST00000461469 EDC4Q6P2E9 1401 aaKnown RBP33.21■■■□□ 2.91
LMBR1-214ENST00000461469 BARGINQ6ZT62 677 aa33.21■■■□□ 2.91
LMBR1-214ENST00000461469 HDGFL2Q7Z4V5 671 aaPredicted RBP33.21■■■□□ 2.91
LMBR1-214ENST00000461469 TIMELESSQ9UNS1 1208 aa33.21■■■□□ 2.91
LMBR1-214ENST00000461469 TCP11L2Q8N4U5 519 aa33.19■■■□□ 2.9
LMBR1-214ENST00000461469 KCNH5Q8NCM2 988 aa33.19■■■□□ 2.9
LMBR1-214ENST00000461469 CRB1P82279 1406 aa33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms