RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 XRCC6P12956 609 aaKnown RBP eCLIP17.76■□□□□ 0.43
NCL-207ENST00000461347 GOLGA6L4A6NEF3 574 aa17.75■□□□□ 0.43
NCL-207ENST00000461347 ADGBQ8N7X0 1667 aa17.75■□□□□ 0.43
NCL-207ENST00000461347 RNF214Q8ND24 703 aa17.75■□□□□ 0.43
NCL-207ENST00000461347 NECTIN2Q92692 538 aa17.75■□□□□ 0.43
NCL-207ENST00000461347 ANO2Q9NQ90 1003 aa17.74■□□□□ 0.43
NCL-207ENST00000461347 FAM13BQ9NYF5 915 aa17.74■□□□□ 0.43
NCL-207ENST00000461347 TNPO1Q92973 898 aaKnown RBP17.74■□□□□ 0.43
NCL-207ENST00000461347 NOS1P29475 1434 aa17.74■□□□□ 0.43
NCL-207ENST00000461347 CIZ1Q9ULV3 898 aaPredicted RBP17.73■□□□□ 0.43
NCL-207ENST00000461347 PRPF40AO75400 957 aaKnown RBP17.73■□□□□ 0.43
NCL-207ENST00000461347 INSRP06213 1382 aa17.73■□□□□ 0.43
NCL-207ENST00000461347 POLR3AO14802 1390 aaPredicted RBP17.72■□□□□ 0.43
NCL-207ENST00000461347 MAGI2Q86UL8 1455 aa17.72■□□□□ 0.43
NCL-207ENST00000461347 RABEP1Q15276 862 aa17.72■□□□□ 0.43
NCL-207ENST00000461347 ISY1Q9ULR0 285 aaKnown RBP17.72■□□□□ 0.43
NCL-207ENST00000461347 EIF2AK4Q9P2K8 1649 aaKnown RBP17.72■□□□□ 0.43
NCL-207ENST00000461347 DUOX2Q9NRD8 1548 aa17.71■□□□□ 0.43
NCL-207ENST00000461347 TRAPPC8Q9Y2L5 1435 aa17.71■□□□□ 0.43
NCL-207ENST00000461347 HDGFP51858 240 aaKnown RBP17.71■□□□□ 0.42
NCL-207ENST00000461347 FGD1P98174 961 aa17.71■□□□□ 0.42
NCL-207ENST00000461347 CDK19Q9BWU1 502 aa17.71■□□□□ 0.42
NCL-207ENST00000461347 R3HCC1Q9Y3T6 440 aaKnown RBP17.71■□□□□ 0.42
NCL-207ENST00000461347 CHAF1AQ13111 956 aaPredicted RBP17.7■□□□□ 0.42
NCL-207ENST00000461347 LTV1Q96GA3 475 aaPredicted RBP17.7■□□□□ 0.42
NCL-207ENST00000461347 LMOD2Q6P5Q4 547 aa17.7■□□□□ 0.42
NCL-207ENST00000461347 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.7■□□□□ 0.423e-12■□□□□ 9.5
NCL-207ENST00000461347 NEK4P51957 841 aa17.7■□□□□ 0.42
NCL-207ENST00000461347 ZNF521Q96K83 1311 aa17.69■□□□□ 0.42
NCL-207ENST00000461347 SSFA2P28290 1259 aa17.69■□□□□ 0.42
NCL-207ENST00000461347 AMPHP49418 695 aa17.69■□□□□ 0.42
NCL-207ENST00000461347 FCHSD2O94868 740 aa17.69■□□□□ 0.42
NCL-207ENST00000461347 DRC7Q8IY82 874 aa17.69■□□□□ 0.42
NCL-207ENST00000461347 FBLN1P23142 703 aa17.68■□□□□ 0.42
NCL-207ENST00000461347 MYO5CQ9NQX4 1742 aa17.68■□□□□ 0.42
NCL-207ENST00000461347 CCDC173Q0VFZ6 552 aa17.68■□□□□ 0.42
NCL-207ENST00000461347 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.68■□□□□ 0.42
NCL-207ENST00000461347 C14orf93Q9H972 538 aaKnown RBP17.68■□□□□ 0.42
NCL-207ENST00000461347 TTC37Q6PGP7 1564 aa17.68■□□□□ 0.42
NCL-207ENST00000461347 FKBP5Q13451 457 aaPredicted RBP17.67■□□□□ 0.42
NCL-207ENST00000461347 HDAC1Q13547 482 aaPredicted RBP17.67■□□□□ 0.42
NCL-207ENST00000461347 TAOK2Q9UL54 1235 aa17.67■□□□□ 0.42
NCL-207ENST00000461347 RAPGEF3O95398 923 aa17.67■□□□□ 0.42
NCL-207ENST00000461347 ARHGEF5Q12774 1597 aa17.67■□□□□ 0.42
NCL-207ENST00000461347 NAP1L2Q9ULW6 460 aaPredicted RBP17.67■□□□□ 0.42
NCL-207ENST00000461347 ARAP3Q8WWN8 1544 aa17.66■□□□□ 0.42
NCL-207ENST00000461347 PHF14O94880 888 aa17.66■□□□□ 0.42
NCL-207ENST00000461347 DCTN1Q14203 1278 aa17.66■□□□□ 0.42
NCL-207ENST00000461347 RRAGDQ9NQL2 400 aaPredicted RBP17.66■□□□□ 0.42
NCL-207ENST00000461347 NFE2L2Q16236 605 aa17.66■□□□□ 0.42
NCL-207ENST00000461347 RPGRIP1LQ68CZ1 1315 aa17.65■□□□□ 0.42
NCL-207ENST00000461347 TBC1D9Q6ZT07 1266 aa17.65■□□□□ 0.42
NCL-207ENST00000461347 NGDNQ8NEJ9 315 aaKnown RBP17.65■□□□□ 0.42
NCL-207ENST00000461347 NPC1L1Q9UHC9 1359 aa17.65■□□□□ 0.42
NCL-207ENST00000461347 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.65■□□□□ 0.425e-21■□□□□ 9.4
NCL-207ENST00000461347 CCDC27Q2M243 656 aa17.65■□□□□ 0.42
NCL-207ENST00000461347 TSPYL4Q9UJ04 414 aa17.65■□□□□ 0.42
NCL-207ENST00000461347 PLCH2O75038 1416 aa17.65■□□□□ 0.42
NCL-207ENST00000461347 RRS1Q15050 365 aaKnown RBP17.64■□□□□ 0.42
NCL-207ENST00000461347 BMP2KLQ5H9B9 411 aa17.64■□□□□ 0.42
NCL-207ENST00000461347 TRMT2AQ8IZ69 625 aaKnown RBP17.64■□□□□ 0.42
NCL-207ENST00000461347 RBM42Q9BTD8 480 aaKnown RBP17.64■□□□□ 0.42
NCL-207ENST00000461347 ZRSR1Q15695 479 aaKnown RBP17.64■□□□□ 0.41
NCL-207ENST00000461347 ALDH1L2Q3SY69 923 aa17.64■□□□□ 0.41
NCL-207ENST00000461347 ZNF428Q96B54 188 aa17.64■□□□□ 0.41
NCL-207ENST00000461347 ABCC11Q96J66 1382 aa17.64■□□□□ 0.41
NCL-207ENST00000461347 MAST1Q9Y2H9 1570 aa17.64■□□□□ 0.41
NCL-207ENST00000461347 RBM10P98175 930 aaKnown RBP17.64■□□□□ 0.41
NCL-207ENST00000461347 ATAD2Q6PL18 1390 aa17.63■□□□□ 0.41
NCL-207ENST00000461347 SULT6B1Q6IMI4 303 aa17.63■□□□□ 0.41
NCL-207ENST00000461347 MPNDQ8N594 471 aa17.63■□□□□ 0.41
NCL-207ENST00000461347 ABCA9Q8IUA7 1624 aa17.63■□□□□ 0.41
NCL-207ENST00000461347 SAMD9LQ8IVG5 1584 aa17.62■□□□□ 0.41
NCL-207ENST00000461347 NUCB1Q02818 461 aa17.62■□□□□ 0.41
NCL-207ENST00000461347 ZMYND15Q9H091 742 aa17.62■□□□□ 0.41
NCL-207ENST00000461347 SMARCA5O60264 1052 aaPredicted RBP17.62■□□□□ 0.41
NCL-207ENST00000461347 SLC4A2P04920 1241 aa17.62■□□□□ 0.41
NCL-207ENST00000461347 ADGRL1O94910 1474 aa17.61■□□□□ 0.41
NCL-207ENST00000461347 SMC5Q8IY18 1101 aa17.61■□□□□ 0.41
NCL-207ENST00000461347 EMILIN1Q9Y6C2 1016 aa17.61■□□□□ 0.41
NCL-207ENST00000461347 CHMP3Q9Y3E7 222 aa17.61■□□□□ 0.41
NCL-207ENST00000461347 PLA2R1Q13018 1463 aa17.61■□□□□ 0.41
NCL-207ENST00000461347 WDR7Q9Y4E6 1490 aa17.6■□□□□ 0.41
NCL-207ENST00000461347 EIF2S2P20042 333 aaKnown RBP17.6■□□□□ 0.41
NCL-207ENST00000461347 IDI1Q13907 227 aa17.6■□□□□ 0.41
NCL-207ENST00000461347 CLCN1P35523 988 aa17.59■□□□□ 0.41
NCL-207ENST00000461347 SLC52A1Q9NWF4 448 aa17.59■□□□□ 0.41
NCL-207ENST00000461347 ERC2O15083 957 aa17.59■□□□□ 0.41
NCL-207ENST00000461347 TPM2P07951 284 aa17.59■□□□□ 0.41
NCL-207ENST00000461347 WAPLQ7Z5K2 1190 aa17.59■□□□□ 0.41
NCL-207ENST00000461347 KDM5DQ9BY66 1539 aa17.59■□□□□ 0.41
NCL-207ENST00000461347 FYB1O15117 783 aa17.59■□□□□ 0.41
NCL-207ENST00000461347 ZBTB40Q9NUA8 1239 aa17.59■□□□□ 0.41
NCL-207ENST00000461347 ZSCAN30Q86W11 494 aa17.58■□□□□ 0.41
NCL-207ENST00000461347 TXNDC2Q86VQ3 553 aa17.58■□□□□ 0.4
NCL-207ENST00000461347 CWC22Q9HCG8 908 aaKnown RBP17.58■□□□□ 0.4
NCL-207ENST00000461347 FANCAO15360 1455 aa17.58■□□□□ 0.4
NCL-207ENST00000461347 BAG4O95429 457 aaKnown RBP17.57■□□□□ 0.4
NCL-207ENST00000461347 MBD3O95983 291 aa17.57■□□□□ 0.4
NCL-207ENST00000461347 CSPP1Q1MSJ5 1256 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms