RNA–Protein interactions for RNA: ENST00000461249.1

GPN1-206, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best)

Gene GPN1, Length 969 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-206ENST00000461249 PHF8Q9UPP1 1060 aa11.27□□□□□ -0.61
GPN1-206ENST00000461249 CCDC61Q9Y6R9 512 aa11.27□□□□□ -0.61
GPN1-206ENST00000461249 USP32Q8NFA0 1604 aa11.27□□□□□ -0.61
GPN1-206ENST00000461249 DISP3Q9P2K9 1392 aa11.27□□□□□ -0.61
GPN1-206ENST00000461249 ROBO1Q9Y6N7 1651 aa11.27□□□□□ -0.61
GPN1-206ENST00000461249 DDX17Q92841 729 aaKnown RBP11.26□□□□□ -0.61
GPN1-206ENST00000461249 PUS7Q96PZ0 661 aaKnown RBP11.26□□□□□ -0.61
GPN1-206ENST00000461249 TSHZ2Q9NRE2 1034 aa11.26□□□□□ -0.61
GPN1-206ENST00000461249 ATP7BP35670 1465 aa11.25□□□□□ -0.61
GPN1-206ENST00000461249 PLEKHG3A1L390 1219 aa11.25□□□□□ -0.61
GPN1-206ENST00000461249 FOXO3O43524 673 aa11.25□□□□□ -0.61
GPN1-206ENST00000461249 CDCA8Q53HL2 280 aa11.25□□□□□ -0.61
GPN1-206ENST00000461249 CABP1Q9NZU7 370 aa11.25□□□□□ -0.61
GPN1-206ENST00000461249 C11orf95C9JLR9 678 aaPredicted RBP11.24□□□□□ -0.61
GPN1-206ENST00000461249 HSPA1LP34931 641 aa11.24□□□□□ -0.61
GPN1-206ENST00000461249 NGDNQ8NEJ9 315 aaKnown RBP11.24□□□□□ -0.61
GPN1-206ENST00000461249 TMC1Q8TDI8 760 aa11.24□□□□□ -0.61
GPN1-206ENST00000461249 ATAD2Q6PL18 1390 aa11.24□□□□□ -0.61
GPN1-206ENST00000461249 PPIP5K1Q6PFW1 1433 aa11.24□□□□□ -0.61
GPN1-206ENST00000461249 PSME1Q06323 249 aa11.23□□□□□ -0.61
GPN1-206ENST00000461249 ILDR1Q86SU0 546 aaPredicted RBP11.23□□□□□ -0.61
GPN1-206ENST00000461249 MIER1Q8N108 512 aa11.23□□□□□ -0.61
GPN1-206ENST00000461249 POLR3GLQ9BT43 218 aa11.23□□□□□ -0.61
GPN1-206ENST00000461249 SLC12A5Q9H2X9 1139 aa11.23□□□□□ -0.61
GPN1-206ENST00000461249 ACEP12821 1306 aa11.22□□□□□ -0.61
GPN1-206ENST00000461249 XPCQ01831 940 aaPredicted RBP11.22□□□□□ -0.61
GPN1-206ENST00000461249 KIF1AQ12756 1690 aa11.22□□□□□ -0.61
GPN1-206ENST00000461249 ITSN1Q15811 1721 aa11.22□□□□□ -0.61
GPN1-206ENST00000461249 KRT28Q7Z3Y7 464 aa11.22□□□□□ -0.61
GPN1-206ENST00000461249 NPHP3Q7Z494 1330 aa11.22□□□□□ -0.61
GPN1-206ENST00000461249 TOPAZ1Q8N9V7 1692 aa11.21□□□□□ -0.61
GPN1-206ENST00000461249 AHDC1Q5TGY3 1603 aaPredicted RBP11.2□□□□□ -0.62
GPN1-206ENST00000461249 POLR3AO14802 1390 aaPredicted RBP11.2□□□□□ -0.62
GPN1-206ENST00000461249 SOS2Q07890 1332 aaPredicted RBP11.2□□□□□ -0.62
GPN1-206ENST00000461249 C1QBPQ07021 282 aaKnown RBP11.2□□□□□ -0.62
GPN1-206ENST00000461249 PHLPP1O60346 1717 aa11.2□□□□□ -0.62
GPN1-206ENST00000461249 NHSL1Q5SYE7 1610 aa11.2□□□□□ -0.62
GPN1-206ENST00000461249 KIF7Q2M1P5 1343 aa11.19□□□□□ -0.62
GPN1-206ENST00000461249 LRRC59Q96AG4 307 aaKnown RBP11.19□□□□□ -0.62
GPN1-206ENST00000461249 CIZ1Q9ULV3 898 aaPredicted RBP11.19□□□□□ -0.62
GPN1-206ENST00000461249 HDGFL2Q7Z4V5 671 aaPredicted RBP11.18□□□□□ -0.62
GPN1-206ENST00000461249 TERF2IPQ9NYB0 399 aa11.18□□□□□ -0.62
GPN1-206ENST00000461249 SSUH2Q9Y2M2 353 aa11.18□□□□□ -0.62
GPN1-206ENST00000461249 PXDNQ92626 1479 aa11.18□□□□□ -0.62
GPN1-206ENST00000461249 NINLQ9Y2I6 1382 aa11.17□□□□□ -0.62
GPN1-206ENST00000461249 PAK3O75914 559 aaPredicted RBP11.17□□□□□ -0.62
GPN1-206ENST00000461249 CPSF1Q10570 1443 aaKnown RBP11.17□□□□□ -0.62
GPN1-206ENST00000461249 COL16A1Q07092 1604 aaPredicted RBP11.17□□□□□ -0.62
GPN1-206ENST00000461249 SBNO1A3KN83 1393 aa11.16□□□□□ -0.62
GPN1-206ENST00000461249 KTN1Q86UP2 1357 aaKnown RBP11.16□□□□□ -0.62
GPN1-206ENST00000461249 SPATA31A3Q5VYP0 1347 aa11.16□□□□□ -0.62
GPN1-206ENST00000461249 WASHC2AQ641Q2 1341 aa11.16□□□□□ -0.62
GPN1-206ENST00000461249 LMOD2Q6P5Q4 547 aa11.16□□□□□ -0.62
GPN1-206ENST00000461249 CD163L1Q9NR16 1453 aa11.16□□□□□ -0.62
GPN1-206ENST00000461249 CCDC7Q96M83 1385 aa11.16□□□□□ -0.62
GPN1-206ENST00000461249 SPDYE2BA6NHP3 402 aa11.15□□□□□ -0.62
GPN1-206ENST00000461249 SPDYE6P0CI01 402 aa11.15□□□□□ -0.62
GPN1-206ENST00000461249 SPDYE2Q495Y8 402 aa11.15□□□□□ -0.62
GPN1-206ENST00000461249 USP6P35125 1406 aa11.15□□□□□ -0.62
GPN1-206ENST00000461249 AKAP12Q02952 1782 aa11.15□□□□□ -0.62
GPN1-206ENST00000461249 A0A1W2PP64 1363 aa11.15□□□□□ -0.63
GPN1-206ENST00000461249 TTC21BQ7Z4L5 1316 aa11.14□□□□□ -0.63
GPN1-206ENST00000461249 PANK3Q9H999 370 aa11.14□□□□□ -0.63
GPN1-206ENST00000461249 BRD4O60885 1362 aaPredicted RBP11.14□□□□□ -0.63
GPN1-206ENST00000461249 ANKRD36BQ8N2N9 1353 aa11.14□□□□□ -0.63
GPN1-206ENST00000461249 JCADQ9P266 1359 aa11.14□□□□□ -0.63
GPN1-206ENST00000461249 TRPM3Q9HCF6 1732 aaPredicted RBP11.13□□□□□ -0.63
GPN1-206ENST00000461249 TNS3Q68CZ2 1445 aa11.13□□□□□ -0.63
GPN1-206ENST00000461249 SSH2Q76I76 1423 aa11.13□□□□□ -0.63
GPN1-206ENST00000461249 NUTM2GQ5VZR2 741 aa11.13□□□□□ -0.63
GPN1-206ENST00000461249 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.13□□□□□ -0.63
GPN1-206ENST00000461249 ABTB2Q8N961 1025 aa11.13□□□□□ -0.63
GPN1-206ENST00000461249 CARD14Q9BXL6 1004 aa11.13□□□□□ -0.63
GPN1-206ENST00000461249 MYOM1P52179 1685 aa11.13□□□□□ -0.63
GPN1-206ENST00000461249 PNPLA6Q8IY17 1366 aa11.13□□□□□ -0.63
GPN1-206ENST00000461249 PLEKHG5O94827 1062 aa11.12□□□□□ -0.63
GPN1-206ENST00000461249 ARHGEF10O15013 1369 aa11.12□□□□□ -0.63
GPN1-206ENST00000461249 MON2Q7Z3U7 1717 aa11.12□□□□□ -0.63
GPN1-206ENST00000461249 TTC21AQ8NDW8 1320 aa11.11□□□□□ -0.63
GPN1-206ENST00000461249 EDC4Q6P2E9 1401 aaKnown RBP11.11□□□□□ -0.63
GPN1-206ENST00000461249 NUTM2BA6NNL0 878 aaPredicted RBP11.11□□□□□ -0.63
GPN1-206ENST00000461249 NUTM2EB1AL46 878 aaPredicted RBP11.11□□□□□ -0.63
GPN1-206ENST00000461249 NUTM2AQ8IVF1 878 aaPredicted RBP11.11□□□□□ -0.63
GPN1-206ENST00000461249 ZNF316A6NFI3 1004 aaPredicted RBP11.1□□□□□ -0.63
GPN1-206ENST00000461249 NLRP6P59044 892 aa11.1□□□□□ -0.63
GPN1-206ENST00000461249 NLRP13Q86W25 1043 aa11.1□□□□□ -0.63
GPN1-206ENST00000461249 NME9Q86XW9 330 aa11.1□□□□□ -0.63
GPN1-206ENST00000461249 CABLES1Q8TDN4 633 aa11.1□□□□□ -0.63
GPN1-206ENST00000461249 ALS2Q96Q42 1657 aa11.1□□□□□ -0.63
GPN1-206ENST00000461249 SPATA31A6Q5VVP1 1343 aa11.09□□□□□ -0.63
GPN1-206ENST00000461249 SHPRHQ149N8 1683 aa11.09□□□□□ -0.63
GPN1-206ENST00000461249 ZRANB1Q9UGI0 708 aa11.09□□□□□ -0.63
GPN1-206ENST00000461249 NSD3Q9BZ95 1437 aa11.09□□□□□ -0.63
GPN1-206ENST00000461249 NRKQ7Z2Y5 1582 aa11.08□□□□□ -0.64
GPN1-206ENST00000461249 FYB1O15117 783 aa11.08□□□□□ -0.64
GPN1-206ENST00000461249 COL22A1Q8NFW1 1626 aaPredicted RBP11.07□□□□□ -0.64
GPN1-206ENST00000461249 DSG3P32926 999 aa11.07□□□□□ -0.64
GPN1-206ENST00000461249 KNSTRNQ9Y448 316 aa11.07□□□□□ -0.64
GPN1-206ENST00000461249 USP31Q70CQ4 1352 aa11.06□□□□□ -0.64
GPN1-206ENST00000461249 PIK3C2AO00443 1686 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms