RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 USP47Q96K76 1375 aa10.71□□□□□ -0.7
BRCA1-205ENST00000461221 MINK1Q8N4C8 1332 aaPredicted RBP10.71□□□□□ -0.7
BRCA1-205ENST00000461221 RNF214Q8ND24 703 aa10.71□□□□□ -0.7
BRCA1-205ENST00000461221 DEF6Q9H4E7 631 aa10.7□□□□□ -0.7
BRCA1-205ENST00000461221 CBFA2T2O43439 604 aa10.7□□□□□ -0.7
BRCA1-205ENST00000461221 DESP17661 470 aa10.7□□□□□ -0.7
BRCA1-205ENST00000461221 BRPF1P55201 1214 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-205ENST00000461221 NFKBIBQ15653 356 aa10.7□□□□□ -0.7
BRCA1-205ENST00000461221 CLASRPQ8N2M8 674 aaKnown RBP10.7□□□□□ -0.7
BRCA1-205ENST00000461221 GNAI3P08754 354 aa10.69□□□□□ -0.7
BRCA1-205ENST00000461221 ERC1Q8IUD2 1116 aa10.69□□□□□ -0.7
BRCA1-205ENST00000461221 SERPINC1P01008 464 aa10.69□□□□□ -0.7
BRCA1-205ENST00000461221 GBP2P32456 591 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-205ENST00000461221 TRAK2O60296 914 aa10.69□□□□□ -0.7
BRCA1-205ENST00000461221 AEBP1Q8IUX7 1158 aa10.69□□□□□ -0.7
BRCA1-205ENST00000461221 BCL11BQ9C0K0 894 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-205ENST00000461221 MIA2Q96PC5 1412 aa10.69□□□□□ -0.7
BRCA1-205ENST00000461221 MTMR7Q9Y216 660 aa10.68□□□□□ -0.7
BRCA1-205ENST00000461221 CCDC192P0DO97 292 aa10.68□□□□□ -0.7
BRCA1-205ENST00000461221 PDS5BQ9NTI5 1447 aa10.68□□□□□ -0.7
BRCA1-205ENST00000461221 CCDC112Q8NEF3 446 aa10.67□□□□□ -0.7
BRCA1-205ENST00000461221 FMNL2Q96PY5 1086 aa10.67□□□□□ -0.7
BRCA1-205ENST00000461221 ANKRD1Q15327 319 aa10.67□□□□□ -0.7
BRCA1-205ENST00000461221 ATP2B1P20020 1258 aa10.67□□□□□ -0.7
BRCA1-205ENST00000461221 GNL3LQ9NVN8 582 aaKnown RBP10.67□□□□□ -0.7
BRCA1-205ENST00000461221 TRIM22Q8IYM9 498 aa10.67□□□□□ -0.7
BRCA1-205ENST00000461221 DCAF8L1A6NGE4 600 aa10.66□□□□□ -0.7
BRCA1-205ENST00000461221 TAX1BP1Q86VP1 789 aa10.66□□□□□ -0.7
BRCA1-205ENST00000461221 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.66□□□□□ -0.7
BRCA1-205ENST00000461221 AIMP1Q12904 312 aaKnown RBP10.66□□□□□ -0.7
BRCA1-205ENST00000461221 CCDC30Q5VVM6 783 aa10.66□□□□□ -0.7
BRCA1-205ENST00000461221 TANGO6Q9C0B7 1094 aa10.66□□□□□ -0.7
BRCA1-205ENST00000461221 KIF6Q6ZMV9 814 aa10.66□□□□□ -0.7
BRCA1-205ENST00000461221 NOL7Q9UMY1 257 aaKnown RBP10.66□□□□□ -0.7
BRCA1-205ENST00000461221 PRPF40AO75400 957 aaKnown RBP10.65□□□□□ -0.7
BRCA1-205ENST00000461221 KLHL34Q8N239 644 aa10.65□□□□□ -0.7
BRCA1-205ENST00000461221 DNAJC2Q99543 621 aaKnown RBP10.65□□□□□ -0.7
BRCA1-205ENST00000461221 JAKMIP3Q5VZ66 844 aa10.65□□□□□ -0.7
BRCA1-205ENST00000461221 CCDC91Q7Z6B0 441 aa10.65□□□□□ -0.7
BRCA1-205ENST00000461221 NEK4P51957 841 aa10.65□□□□□ -0.71
BRCA1-205ENST00000461221 CCDC57Q2TAC2 916 aa10.65□□□□□ -0.71
BRCA1-205ENST00000461221 CCDC158Q5M9N0 1113 aa10.65□□□□□ -0.71
BRCA1-205ENST00000461221 KDM4AO75164 1064 aa10.64□□□□□ -0.71
BRCA1-205ENST00000461221 NEBLO76041 1014 aa10.64□□□□□ -0.71
BRCA1-205ENST00000461221 TTC39AQ5SRH9 613 aa10.64□□□□□ -0.71
BRCA1-205ENST00000461221 TNMDQ9H2S6 317 aa10.64□□□□□ -0.71
BRCA1-205ENST00000461221 STAC3Q96MF2 364 aa10.64□□□□□ -0.71
BRCA1-205ENST00000461221 NACAP1Q9BZK3 213 aa10.64□□□□□ -0.71
BRCA1-205ENST00000461221 FIBPO43427 364 aa10.64□□□□□ -0.71
BRCA1-205ENST00000461221 SOGA3Q5TF21 947 aa10.64□□□□□ -0.71
BRCA1-205ENST00000461221 DYDC1Q8WWB3 177 aa10.64□□□□□ -0.71
BRCA1-205ENST00000461221 SLC26A8Q96RN1 970 aa10.64□□□□□ -0.71
BRCA1-205ENST00000461221 SURF6O75683 361 aaKnown RBP10.64□□□□□ -0.71
BRCA1-205ENST00000461221 LRRCC1Q9C099 1032 aa10.64□□□□□ -0.71
BRCA1-205ENST00000461221 BMP2KQ9NSY1 1161 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-205ENST00000461221 TAF3Q5VWG9 929 aa10.63□□□□□ -0.71
BRCA1-205ENST00000461221 SPC24Q8NBT2 197 aa10.63□□□□□ -0.71
BRCA1-205ENST00000461221 TAF4BQ92750 862 aa10.63□□□□□ -0.71
BRCA1-205ENST00000461221 GCC1Q96CN9 775 aa10.63□□□□□ -0.71
BRCA1-205ENST00000461221 CENPHQ9H3R5 247 aa10.63□□□□□ -0.71
BRCA1-205ENST00000461221 CYP46A1Q9Y6A2 500 aa10.63□□□□□ -0.71
BRCA1-205ENST00000461221 WDR33Q9C0J8 1336 aaKnown RBP10.63□□□□□ -0.71
BRCA1-205ENST00000461221 TRIM21P19474 475 aaKnown RBP10.63□□□□□ -0.71
BRCA1-205ENST00000461221 GAS2L2Q8NHY3 880 aa10.63□□□□□ -0.71
BRCA1-205ENST00000461221 DNAI2Q9GZS0 605 aa10.63□□□□□ -0.71
BRCA1-205ENST00000461221 CCDC69A6NI79 296 aa10.62□□□□□ -0.71
BRCA1-205ENST00000461221 CDKL5O76039 1030 aa10.62□□□□□ -0.71
BRCA1-205ENST00000461221 GBP3Q9H0R5 595 aa10.62□□□□□ -0.71
BRCA1-205ENST00000461221 DHX57Q6P158 1386 aaKnown RBP10.62□□□□□ -0.71
BRCA1-205ENST00000461221 KRT85P78386 507 aa10.62□□□□□ -0.71
BRCA1-205ENST00000461221 ZSCAN25Q6NSZ9 544 aa10.62□□□□□ -0.71
BRCA1-205ENST00000461221 ZHX3Q9H4I2 956 aa10.62□□□□□ -0.71
BRCA1-205ENST00000461221 CETN2P41208 172 aa10.62□□□□□ -0.71
BRCA1-205ENST00000461221 NLRP2Q9NX02 1062 aa10.62□□□□□ -0.71
BRCA1-205ENST00000461221 POTEJP0CG39 1038 aa10.62□□□□□ -0.71
BRCA1-205ENST00000461221 RAPGEF2Q9Y4G8 1499 aa10.62□□□□□ -0.71
BRCA1-205ENST00000461221 ATF3P18847 181 aa10.61□□□□□ -0.71
BRCA1-205ENST00000461221 ME1P48163 572 aa10.61□□□□□ -0.71
BRCA1-205ENST00000461221 PANK1Q8TE04 598 aa10.61□□□□□ -0.71
BRCA1-205ENST00000461221 FHOD3Q2V2M9 1422 aa10.61□□□□□ -0.71
BRCA1-205ENST00000461221 SMTNL1A8MU46 457 aa10.61□□□□□ -0.71
BRCA1-205ENST00000461221 STAMBPO95630 424 aa10.61□□□□□ -0.71
BRCA1-205ENST00000461221 PDIA4P13667 645 aaKnown RBP10.61□□□□□ -0.71
BRCA1-205ENST00000461221 CCDC148Q8NFR7 591 aa10.61□□□□□ -0.71
BRCA1-205ENST00000461221 SEPT11Q9NVA2 429 aaKnown RBP10.61□□□□□ -0.71
BRCA1-205ENST00000461221 HMOX1P09601 288 aa10.61□□□□□ -0.71
BRCA1-205ENST00000461221 CEBPZQ03701 1054 aaKnown RBP10.6□□□□□ -0.71
BRCA1-205ENST00000461221 CEP57L1Q8IYX8 460 aa10.6□□□□□ -0.71
BRCA1-205ENST00000461221 PDCL2Q8N4E4 241 aa10.6□□□□□ -0.71
BRCA1-205ENST00000461221 CNNM1Q9NRU3 951 aa10.6□□□□□ -0.71
BRCA1-205ENST00000461221 FAM193AP78312 1265 aa10.6□□□□□ -0.71
BRCA1-205ENST00000461221 STK11IPQ8N1F8 1099 aa10.6□□□□□ -0.71
BRCA1-205ENST00000461221 GNAI2P04899 355 aa10.6□□□□□ -0.71
BRCA1-205ENST00000461221 CCDC97Q96F63 343 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-205ENST00000461221 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.6□□□□□ -0.71
BRCA1-205ENST00000461221 RBM10P98175 930 aaKnown RBP10.6□□□□□ -0.71
BRCA1-205ENST00000461221 CCDC102AQ96A19 550 aa10.6□□□□□ -0.71
BRCA1-205ENST00000461221 LRRFIP2Q9Y608 721 aaKnown RBP10.6□□□□□ -0.71
BRCA1-205ENST00000461221 PLEKHO1Q53GL0 409 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-205ENST00000461221 TDRD9Q8NDG6 1382 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms