RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 C9orf84Q5VXU9 1444 aa8.83□□□□□ -1
NUP98-208ENST00000461047 RNF40O75150 1001 aa8.83□□□□□ -1
NUP98-208ENST00000461047 SLC4A3P48751 1232 aa8.83□□□□□ -1
NUP98-208ENST00000461047 SAMD7Q7Z3H4 446 aa8.83□□□□□ -1
NUP98-208ENST00000461047 NPDC1Q9NQX5 325 aaPredicted RBP8.83□□□□□ -1
NUP98-208ENST00000461047 PPRC1Q5VV67 1664 aaKnown RBP8.83□□□□□ -1
NUP98-208ENST00000461047 ARHGEF12Q9NZN5 1544 aa8.83□□□□□ -1
NUP98-208ENST00000461047 ESF1Q9H501 851 aaKnown RBP8.82□□□□□ -1
NUP98-208ENST00000461047 ROCK1Q13464 1354 aa8.82□□□□□ -1
NUP98-208ENST00000461047 COL17A1Q9UMD9 1497 aaPredicted RBP8.82□□□□□ -1
NUP98-208ENST00000461047 SHANK2Q9UPX8 1470 aa8.82□□□□□ -1
NUP98-208ENST00000461047 ATP10AO60312 1499 aa8.81□□□□□ -1
NUP98-208ENST00000461047 PTGDRQ13258 359 aa8.8□□□□□ -1
NUP98-208ENST00000461047 KIF15Q9NS87 1388 aa8.8□□□□□ -1
NUP98-208ENST00000461047 DNMT1P26358 1616 aaKnown RBP8.8□□□□□ -1
NUP98-208ENST00000461047 ZMYM4Q5VZL5 1548 aa8.8□□□□□ -1
NUP98-208ENST00000461047 ZFYVE16Q7Z3T8 1539 aa8.8□□□□□ -1
NUP98-208ENST00000461047 NCOA1Q15788 1441 aa8.8□□□□□ -1
NUP98-208ENST00000461047 KDM5CP41229 1560 aa8.79□□□□□ -1
NUP98-208ENST00000461047 DHX29Q7Z478 1369 aaKnown RBP8.79□□□□□ -1
NUP98-208ENST00000461047 FCHSD2O94868 740 aa8.79□□□□□ -1
NUP98-208ENST00000461047 VSIG10Q8N0Z9 540 aa8.79□□□□□ -1
NUP98-208ENST00000461047 NECTIN2Q92692 538 aa8.79□□□□□ -1
NUP98-208ENST00000461047 ATP7AQ04656 1500 aa8.79□□□□□ -1
NUP98-208ENST00000461047 HECW2Q9P2P5 1572 aa8.78□□□□□ -1
NUP98-208ENST00000461047 KIF3BO15066 747 aa8.78□□□□□ -1
NUP98-208ENST00000461047 IFFO2Q5TF58 517 aa8.78□□□□□ -1
NUP98-208ENST00000461047 TTC13Q8NBP0 860 aa8.78□□□□□ -1
NUP98-208ENST00000461047 KDM2AQ9Y2K7 1162 aa8.78□□□□□ -1
NUP98-208ENST00000461047 MAST1Q9Y2H9 1570 aa8.78□□□□□ -1
NUP98-208ENST00000461047 A2MP01023 1474 aa8.77□□□□□ -1
NUP98-208ENST00000461047 KANK1Q14678 1352 aa8.77□□□□□ -1.01
NUP98-208ENST00000461047 TESPA1A2RU30 521 aaPredicted RBP8.77□□□□□ -1.01
NUP98-208ENST00000461047 C3orf80F5H4A9 247 aa8.77□□□□□ -1.01
NUP98-208ENST00000461047 HRCP23327 699 aa8.77□□□□□ -1.01
NUP98-208ENST00000461047 RBM46Q8TBY0 533 aaKnown RBP8.77□□□□□ -1.01
NUP98-208ENST00000461047 PCGF6Q9BYE7 350 aa8.77□□□□□ -1.01
NUP98-208ENST00000461047 ADGRL2O95490 1459 aa8.77□□□□□ -1.01
NUP98-208ENST00000461047 DUOX2Q9NRD8 1548 aa8.76□□□□□ -1.01
NUP98-208ENST00000461047 KCNC4Q03721 635 aa8.76□□□□□ -1.01
NUP98-208ENST00000461047 GGT6Q6P531 493 aa8.76□□□□□ -1.01
NUP98-208ENST00000461047 SLF2Q8IX21 1173 aa8.76□□□□□ -1.01
NUP98-208ENST00000461047 TRIM52Q96A61 297 aa8.76□□□□□ -1.01
NUP98-208ENST00000461047 ANKRD50Q9ULJ7 1429 aa8.76□□□□□ -1.01
NUP98-208ENST00000461047 YEATS2Q9ULM3 1422 aa8.76□□□□□ -1.01
NUP98-208ENST00000461047 RICTORQ6R327 1708 aa8.76□□□□□ -1.01
NUP98-208ENST00000461047 PTPRKQ15262 1439 aa8.75□□□□□ -1.01
NUP98-208ENST00000461047 ERBINQ96RT1 1412 aa8.75□□□□□ -1.01
NUP98-208ENST00000461047 SETD5Q9C0A6 1442 aa8.75□□□□□ -1.01
NUP98-208ENST00000461047 TULP1O00294 542 aaPredicted RBP8.75□□□□□ -1.01
NUP98-208ENST00000461047 ITGBL1O95965 494 aaPredicted RBP8.75□□□□□ -1.01
NUP98-208ENST00000461047 FRMPD1Q5SYB0 1578 aa8.74□□□□□ -1.01
NUP98-208ENST00000461047 HFM1A2PYH4 1435 aa8.74□□□□□ -1.01
NUP98-208ENST00000461047 MLECQ14165 292 aa8.74□□□□□ -1.01
NUP98-208ENST00000461047 SWT1Q5T5J6 900 aaKnown RBP8.74□□□□□ -1.01
NUP98-208ENST00000461047 EYA1Q99502 592 aa8.74□□□□□ -1.01
NUP98-208ENST00000461047 WASHC2CQ9Y4E1 1318 aa8.74□□□□□ -1.01
NUP98-208ENST00000461047 INO80Q9ULG1 1556 aaPredicted RBP8.73□□□□□ -1.01
NUP98-208ENST00000461047 HIC1Q14526 733 aa8.73□□□□□ -1.01
NUP98-208ENST00000461047 ARHGEF40Q8TER5 1519 aa8.73□□□□□ -1.01
NUP98-208ENST00000461047 PLXNC1O60486 1568 aa8.73□□□□□ -1.01
NUP98-208ENST00000461047 NAIPQ13075 1403 aa8.72□□□□□ -1.01
NUP98-208ENST00000461047 KIDINS220Q9ULH0 1771 aa8.72□□□□□ -1.01
NUP98-208ENST00000461047 AGLP35573 1532 aa8.72□□□□□ -1.01
NUP98-208ENST00000461047 A0A0G2JS52 829 aa8.72□□□□□ -1.01
NUP98-208ENST00000461047 DNAJB2P25686 324 aa8.72□□□□□ -1.01
NUP98-208ENST00000461047 RBM26Q5T8P6 1007 aaKnown RBP8.72□□□□□ -1.01
NUP98-208ENST00000461047 ADGBQ8N7X0 1667 aa8.72□□□□□ -1.01
NUP98-208ENST00000461047 REREQ9P2R6 1566 aa8.71□□□□□ -1.02
NUP98-208ENST00000461047 DIP2CQ9Y2E4 1556 aa8.71□□□□□ -1.02
NUP98-208ENST00000461047 ADGRG1Q9Y653 693 aa8.71□□□□□ -1.02
NUP98-208ENST00000461047 CROCC2H7BZ55 1655 aa8.71□□□□□ -1.02
NUP98-208ENST00000461047 NUP155O75694 1391 aa8.71□□□□□ -1.02
NUP98-208ENST00000461047 RGS20O76081 388 aa8.7□□□□□ -1.02
NUP98-208ENST00000461047 PRR14Q9BWN1 585 aa8.7□□□□□ -1.02
NUP98-208ENST00000461047 CNTLNQ9NXG0 1405 aa8.7□□□□□ -1.02
NUP98-208ENST00000461047 ABCA6Q8N139 1617 aa8.69□□□□□ -1.02
NUP98-208ENST00000461047 OATP04181 439 aa8.69□□□□□ -1.02
NUP98-208ENST00000461047 RAB3GAP2Q9H2M9 1393 aa8.69□□□□□ -1.02
NUP98-208ENST00000461047 RCCD1A6NED2 376 aa8.68□□□□□ -1.02
NUP98-208ENST00000461047 GNPATO15228 680 aa8.68□□□□□ -1.02
NUP98-208ENST00000461047 FAM161AQ3B820 660 aa8.68□□□□□ -1.02
NUP98-208ENST00000461047 GPIHBP1Q8IV16 184 aa8.67□□□□□ -1.02
NUP98-208ENST00000461047 MPHOSPH9Q99550 1183 aa8.67□□□□□ -1.02
NUP98-208ENST00000461047 MTRQ99707 1265 aa8.67□□□□□ -1.02
NUP98-208ENST00000461047 TMEM134Q9H6X4 195 aa8.67□□□□□ -1.02
NUP98-208ENST00000461047 IL21Q9HBE4 155 aa8.67□□□□□ -1.02
NUP98-208ENST00000461047 EIF2AK4Q9P2K8 1649 aaKnown RBP8.67□□□□□ -1.02
NUP98-208ENST00000461047 FAM135AQ9P2D6 1515 aa8.66□□□□□ -1.02
NUP98-208ENST00000461047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.66□□□□□ -1.02
NUP98-208ENST00000461047 APLP1P51693 650 aa8.66□□□□□ -1.02
NUP98-208ENST00000461047 ZMYM3Q14202 1370 aa8.64□□□□□ -1.03
NUP98-208ENST00000461047 KMT5BQ4FZB7 885 aa8.64□□□□□ -1.03
NUP98-208ENST00000461047 TJAP1Q5JTD0 557 aa8.64□□□□□ -1.03
NUP98-208ENST00000461047 GCC2Q8IWJ2 1684 aa8.64□□□□□ -1.03
NUP98-208ENST00000461047 PXYLP1Q8TE99 480 aa8.63□□□□□ -1.03
NUP98-208ENST00000461047 COPS2P61201 443 aa8.62□□□□□ -1.03
NUP98-208ENST00000461047 METTL3Q86U44 580 aaKnown RBP8.62□□□□□ -1.03
NUP98-208ENST00000461047 PCDHB3Q9Y5E6 796 aa8.62□□□□□ -1.03
NUP98-208ENST00000461047 KDM5DQ9BY66 1539 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms