RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 TTC24A2A3L6 582 aaPredicted RBP5.59□□□□□ -1.51
HPS3-203ENST00000460822 PTPRNQ16849 979 aa5.59□□□□□ -1.51
HPS3-203ENST00000460822 MYSM1Q5VVJ2 828 aa5.59□□□□□ -1.51
HPS3-203ENST00000460822 TSC1Q92574 1164 aa5.59□□□□□ -1.51
HPS3-203ENST00000460822 PCDHB15Q9Y5E8 787 aa5.59□□□□□ -1.51
HPS3-203ENST00000460822 FAM181BA6NEQ2 426 aa5.58□□□□□ -1.52
HPS3-203ENST00000460822 HRCP23327 699 aa5.58□□□□□ -1.52
HPS3-203ENST00000460822 DDRGK1Q96HY6 314 aa5.58□□□□□ -1.52
HPS3-203ENST00000460822 CTHP32929 405 aa5.58□□□□□ -1.52
HPS3-203ENST00000460822 CLK2P49760 499 aaKnown RBP5.58□□□□□ -1.52
HPS3-203ENST00000460822 DESI1Q6ICB0 168 aa5.58□□□□□ -1.52
HPS3-203ENST00000460822 WNT7AO00755 349 aa5.57□□□□□ -1.52
HPS3-203ENST00000460822 CABLES1Q8TDN4 633 aa5.57□□□□□ -1.52
HPS3-203ENST00000460822 SENP2Q9HC62 589 aa5.57□□□□□ -1.52
HPS3-203ENST00000460822 POLR3EQ9NVU0 708 aa5.57□□□□□ -1.52
HPS3-203ENST00000460822 WNT7BP56706 349 aa5.56□□□□□ -1.52
HPS3-203ENST00000460822 KCNH2Q12809 1159 aa5.56□□□□□ -1.52
HPS3-203ENST00000460822 TUSC1Q2TAM9 212 aa5.56□□□□□ -1.52
HPS3-203ENST00000460822 ATP13A2Q9NQ11 1180 aa5.56□□□□□ -1.52
HPS3-203ENST00000460822 EVA1BQ9NVM1 165 aa5.56□□□□□ -1.52
HPS3-203ENST00000460822 LIMD1Q9UGP4 676 aa5.56□□□□□ -1.52
HPS3-203ENST00000460822 RC3H1Q5TC82 1133 aaKnown RBP5.56□□□□□ -1.52
HPS3-203ENST00000460822 HELBQ8NG08 1087 aaPredicted RBP5.56□□□□□ -1.52
HPS3-203ENST00000460822 TRIM47Q96LD4 638 aa5.56□□□□□ -1.52
HPS3-203ENST00000460822 SNRPBP14678 240 aaKnown RBP5.55□□□□□ -1.52
HPS3-203ENST00000460822 LYPD8Q6UX82 237 aa5.55□□□□□ -1.52
HPS3-203ENST00000460822 SNIP1Q8TAD8 396 aaKnown RBP5.55□□□□□ -1.52
HPS3-203ENST00000460822 CFAP99D6REC4 459 aa5.55□□□□□ -1.52
HPS3-203ENST00000460822 PTCRAQ6ISU1 281 aaPredicted RBP5.55□□□□□ -1.52
HPS3-203ENST00000460822 KIFC2Q96AC6 838 aa5.55□□□□□ -1.52
HPS3-203ENST00000460822 MRGPRX2Q96LB1 330 aa5.55□□□□□ -1.52
HPS3-203ENST00000460822 UNC93B1Q9H1C4 597 aa5.55□□□□□ -1.52
HPS3-203ENST00000460822 LILRB3O75022 631 aa5.54□□□□□ -1.52
HPS3-203ENST00000460822 SMPD1P17405 629 aa5.54□□□□□ -1.52
HPS3-203ENST00000460822 SKIV2LQ15477 1246 aaKnown RBP5.54□□□□□ -1.52
HPS3-203ENST00000460822 EHBP1Q8NDI1 1231 aa5.54□□□□□ -1.52
HPS3-203ENST00000460822 FAM117AQ9C073 453 aa5.54□□□□□ -1.52
HPS3-203ENST00000460822 LINC01559Q495D7 138 aa5.53□□□□□ -1.52
HPS3-203ENST00000460822 SH3D19Q5HYK7 790 aa5.53□□□□□ -1.52
HPS3-203ENST00000460822 ZMYND15Q9H091 742 aa5.53□□□□□ -1.52
HPS3-203ENST00000460822 LORP23490 312 aaPredicted RBP5.53□□□□□ -1.52
HPS3-203ENST00000460822 SKOR1P84550 965 aa5.53□□□□□ -1.52
HPS3-203ENST00000460822 QPCTQ16769 361 aa5.53□□□□□ -1.52
HPS3-203ENST00000460822 BAP1Q92560 729 aa5.53□□□□□ -1.52
HPS3-203ENST00000460822 SLC16A10Q8TF71 515 aa5.52□□□□□ -1.53
HPS3-203ENST00000460822 UBTFP17480 764 aaKnown RBP5.51□□□□□ -1.53
HPS3-203ENST00000460822 SH3BP2P78314 561 aa5.51□□□□□ -1.53
HPS3-203ENST00000460822 AGERQ15109 404 aa5.51□□□□□ -1.53
HPS3-203ENST00000460822 RTL5Q5HYW3 569 aaPredicted RBP5.51□□□□□ -1.53
HPS3-203ENST00000460822 ARMC2Q8NEN0 867 aa5.51□□□□□ -1.53
HPS3-203ENST00000460822 WASF2Q9Y6W5 498 aa5.51□□□□□ -1.53
HPS3-203ENST00000460822 ALDH1A1P00352 501 aa5.51□□□□□ -1.53
HPS3-203ENST00000460822 XP32Q5T750 250 aa5.51□□□□□ -1.53
HPS3-203ENST00000460822 ZSCAN1Q8NBB4 408 aa5.51□□□□□ -1.53
HPS3-203ENST00000460822 NPAS3Q8IXF0 933 aa5.5□□□□□ -1.53
HPS3-203ENST00000460822 ZNF511Q8NB15 262 aa5.5□□□□□ -1.53
HPS3-203ENST00000460822 PCMTD1Q96MG8 357 aaPredicted RBP5.5□□□□□ -1.53
HPS3-203ENST00000460822 MAP10Q9P2G4 905 aa5.5□□□□□ -1.53
HPS3-203ENST00000460822 PLEKHG3A1L390 1219 aa5.49□□□□□ -1.53
HPS3-203ENST00000460822 J3QL48 77 aa5.49□□□□□ -1.53
HPS3-203ENST00000460822 VARSP26640 1264 aaKnown RBP5.49□□□□□ -1.53
HPS3-203ENST00000460822 SUZ12Q15022 739 aaKnown RBP5.49□□□□□ -1.53
HPS3-203ENST00000460822 PER1O15534 1290 aaPredicted RBP5.49□□□□□ -1.53
HPS3-203ENST00000460822 F12P00748 615 aaPredicted RBP5.49□□□□□ -1.53
HPS3-203ENST00000460822 PROCA1Q8NCQ7 364 aaPredicted RBP5.49□□□□□ -1.53
HPS3-203ENST00000460822 FAM174AQ8TBP5 190 aa5.49□□□□□ -1.53
HPS3-203ENST00000460822 NBPF14Q5TI25 921 aa5.48□□□□□ -1.53
HPS3-203ENST00000460822 NXF1Q9UBU9 619 aaKnown RBP5.48□□□□□ -1.53
HPS3-203ENST00000460822 AP1G2O75843 785 aa5.47□□□□□ -1.53
HPS3-203ENST00000460822 GMPRP36959 345 aa5.47□□□□□ -1.53
HPS3-203ENST00000460822 CTDSPL2Q05D32 466 aa5.47□□□□□ -1.53
HPS3-203ENST00000460822 BPHLQ86WA6 291 aaPredicted RBP5.47□□□□□ -1.53
HPS3-203ENST00000460822 PNMA1Q8ND90 353 aa5.47□□□□□ -1.53
HPS3-203ENST00000460822 ARID3AQ99856 593 aa5.47□□□□□ -1.53
HPS3-203ENST00000460822 SIAH2O43255 324 aa5.46□□□□□ -1.54
HPS3-203ENST00000460822 ARID5BQ14865 1188 aa5.46□□□□□ -1.54
HPS3-203ENST00000460822 HPS1Q92902 700 aa5.46□□□□□ -1.54
HPS3-203ENST00000460822 IRF7Q92985 503 aa5.46□□□□□ -1.54
HPS3-203ENST00000460822 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.46□□□□□ -1.54
HPS3-203ENST00000460822 PPP2R2DQ66LE6 453 aa5.46□□□□□ -1.54
HPS3-203ENST00000460822 FOXJ1Q92949 421 aa5.46□□□□□ -1.54
HPS3-203ENST00000460822 PODXL2Q9NZ53 605 aa5.46□□□□□ -1.54
HPS3-203ENST00000460822 GPKOWQ92917 476 aaPredicted RBP eCLIP5.45□□□□□ -1.54
HPS3-203ENST00000460822 C1orf115Q9H7X2 142 aa5.45□□□□□ -1.54
HPS3-203ENST00000460822 GOPCQ9HD26 462 aa5.45□□□□□ -1.54
HPS3-203ENST00000460822 TLL2Q9Y6L7 1015 aa5.44□□□□□ -1.54
HPS3-203ENST00000460822 ARID3CA6NKF2 412 aa5.44□□□□□ -1.54
HPS3-203ENST00000460822 MPNDQ8N594 471 aa5.44□□□□□ -1.54
HPS3-203ENST00000460822 LRRN4Q8WUT4 740 aa5.44□□□□□ -1.54
HPS3-203ENST00000460822 MAGEB6P1A0A0J9YX57 407 aa5.43□□□□□ -1.54
HPS3-203ENST00000460822 H3BM21 787 aa5.43□□□□□ -1.54
HPS3-203ENST00000460822 RFC5P40937 340 aa5.43□□□□□ -1.54
HPS3-203ENST00000460822 TMEM259Q4ZIN3 620 aa5.43□□□□□ -1.54
HPS3-203ENST00000460822 CAPN5O15484 640 aaPredicted RBP5.42□□□□□ -1.54
HPS3-203ENST00000460822 FLIIQ13045 1269 aa5.42□□□□□ -1.54
HPS3-203ENST00000460822 NNTQ13423 1086 aa5.42□□□□□ -1.54
HPS3-203ENST00000460822 ZC3H4Q9UPT8 1303 aaKnown RBP5.42□□□□□ -1.54
HPS3-203ENST00000460822 NR6A1Q15406 480 aa5.42□□□□□ -1.54
HPS3-203ENST00000460822 ZBTB33Q86T24 672 aa5.42□□□□□ -1.54
HPS3-203ENST00000460822 ARHGAP9Q9BRR9 750 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms