RNA–Protein interactions for RNA: ENST00000460791.1

NXF3-203, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-203ENST00000460791 SHPRHQ149N8 1683 aa8.2□□□□□ -1.1
NXF3-203ENST00000460791 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.19□□□□□ -1.1
NXF3-203ENST00000460791 ZRANB1Q9UGI0 708 aa8.19□□□□□ -1.1
NXF3-203ENST00000460791 ATAD2Q6PL18 1390 aa8.19□□□□□ -1.1
NXF3-203ENST00000460791 PNPLA6Q8IY17 1366 aa8.19□□□□□ -1.1
NXF3-203ENST00000460791 MEX3CQ5U5Q3 659 aaKnown RBP8.18□□□□□ -1.1
NXF3-203ENST00000460791 ABTB2Q8N961 1025 aa8.18□□□□□ -1.1
NXF3-203ENST00000460791 POLR3AO14802 1390 aaPredicted RBP8.18□□□□□ -1.1
NXF3-203ENST00000460791 KTN1Q86UP2 1357 aaKnown RBP8.18□□□□□ -1.1
NXF3-203ENST00000460791 ALS2Q96Q42 1657 aa8.18□□□□□ -1.1
NXF3-203ENST00000460791 SOX12O15370 315 aa8.17□□□□□ -1.1
NXF3-203ENST00000460791 ZEB1P37275 1124 aaPredicted RBP8.17□□□□□ -1.1
NXF3-203ENST00000460791 HAP1P54257 671 aaPredicted RBP8.17□□□□□ -1.1
NXF3-203ENST00000460791 CDCA8Q53HL2 280 aa8.17□□□□□ -1.1
NXF3-203ENST00000460791 HDGFL2Q7Z4V5 671 aaPredicted RBP8.17□□□□□ -1.1
NXF3-203ENST00000460791 ZNF692Q9BU19 519 aaPredicted RBP8.17□□□□□ -1.1
NXF3-203ENST00000460791 TTC21BQ7Z4L5 1316 aa8.17□□□□□ -1.1
NXF3-203ENST00000460791 SBNO1A3KN83 1393 aa8.17□□□□□ -1.1
NXF3-203ENST00000460791 TNS3Q68CZ2 1445 aa8.17□□□□□ -1.1
NXF3-203ENST00000460791 MON2Q7Z3U7 1717 aa8.17□□□□□ -1.1
NXF3-203ENST00000460791 ZBTB7CA1YPR0 619 aa8.16□□□□□ -1.1
NXF3-203ENST00000460791 LRP6O75581 1613 aa8.16□□□□□ -1.1
NXF3-203ENST00000460791 USP6P35125 1406 aa8.16□□□□□ -1.1
NXF3-203ENST00000460791 MYOM1P52179 1685 aa8.16□□□□□ -1.1
NXF3-203ENST00000460791 NLRP6P59044 892 aa8.16□□□□□ -1.1
NXF3-203ENST00000460791 MED1Q15648 1581 aaPredicted RBP8.16□□□□□ -1.1
NXF3-203ENST00000460791 NME9Q86XW9 330 aa8.16□□□□□ -1.1
NXF3-203ENST00000460791 PUS7Q96PZ0 661 aaKnown RBP8.16□□□□□ -1.1
NXF3-203ENST00000460791 TERF2IPQ9NYB0 399 aa8.16□□□□□ -1.1
NXF3-203ENST00000460791 MARF1Q9Y4F3 1742 aaKnown RBP8.16□□□□□ -1.1
NXF3-203ENST00000460791 KAT6BQ8WYB5 2073 aa8.15□□□□□ -1.1
NXF3-203ENST00000460791 RGPD5Q99666 1765 aa8.15□□□□□ -1.1
NXF3-203ENST00000460791 CD163L1Q9NR16 1453 aa8.15□□□□□ -1.1
NXF3-203ENST00000460791 CPSF1Q10570 1443 aaKnown RBP8.15□□□□□ -1.1
NXF3-203ENST00000460791 A0A1W2PP64 1363 aa8.15□□□□□ -1.1
NXF3-203ENST00000460791 KIF7Q2M1P5 1343 aa8.15□□□□□ -1.1
NXF3-203ENST00000460791 SPATA31A6Q5VVP1 1343 aa8.15□□□□□ -1.1
NXF3-203ENST00000460791 ZC3H6P61129 1189 aaKnown RBP8.15□□□□□ -1.1
NXF3-203ENST00000460791 CNGB1Q14028 1251 aaPredicted RBP8.15□□□□□ -1.1
NXF3-203ENST00000460791 NGLY1Q96IV0 654 aa8.15□□□□□ -1.1
NXF3-203ENST00000460791 C8orf37Q96NL8 207 aa8.15□□□□□ -1.1
NXF3-203ENST00000460791 CARD14Q9BXL6 1004 aa8.15□□□□□ -1.1
NXF3-203ENST00000460791 PANK3Q9H999 370 aa8.15□□□□□ -1.1
NXF3-203ENST00000460791 ABCA3Q99758 1704 aa8.15□□□□□ -1.11
NXF3-203ENST00000460791 PIK3C2AO00443 1686 aa8.14□□□□□ -1.11
NXF3-203ENST00000460791 ARHGEF10O15013 1369 aa8.14□□□□□ -1.11
NXF3-203ENST00000460791 COL22A1Q8NFW1 1626 aaPredicted RBP8.14□□□□□ -1.11
NXF3-203ENST00000460791 SSH2Q76I76 1423 aa8.13□□□□□ -1.11
NXF3-203ENST00000460791 MAP2P11137 1827 aaKnown RBP8.13□□□□□ -1.11
NXF3-203ENST00000460791 WASHC2AQ641Q2 1341 aa8.13□□□□□ -1.11
NXF3-203ENST00000460791 FBLN1P23142 703 aa8.13□□□□□ -1.11
NXF3-203ENST00000460791 CHRNA2Q15822 529 aa8.13□□□□□ -1.11
NXF3-203ENST00000460791 NLRP13Q86W25 1043 aa8.13□□□□□ -1.11
NXF3-203ENST00000460791 KIF20BQ96Q89 1820 aa8.13□□□□□ -1.11
NXF3-203ENST00000460791 CRYBG1Q9Y4K1 1723 aa8.12□□□□□ -1.11
NXF3-203ENST00000460791 CCDC7Q96M83 1385 aa8.12□□□□□ -1.11
NXF3-203ENST00000460791 AFF2P51816 1311 aa8.12□□□□□ -1.11
NXF3-203ENST00000460791 FAM83GA6ND36 823 aa8.12□□□□□ -1.11
NXF3-203ENST00000460791 GGNBP2Q9H3C7 697 aa8.12□□□□□ -1.11
NXF3-203ENST00000460791 RGS17Q9UGC6 210 aaPredicted RBP8.12□□□□□ -1.11
NXF3-203ENST00000460791 ANKRD36BQ8N2N9 1353 aa8.11□□□□□ -1.11
NXF3-203ENST00000460791 PHRF1Q9P1Y6 1649 aaKnown RBP8.11□□□□□ -1.11
NXF3-203ENST00000460791 TTC21AQ8NDW8 1320 aa8.11□□□□□ -1.11
NXF3-203ENST00000460791 NRKQ7Z2Y5 1582 aa8.11□□□□□ -1.11
NXF3-203ENST00000460791 FYB1O15117 783 aa8.11□□□□□ -1.11
NXF3-203ENST00000460791 GCP02774 474 aa8.11□□□□□ -1.11
NXF3-203ENST00000460791 POTEAQ6S8J7 498 aa8.11□□□□□ -1.11
NXF3-203ENST00000460791 EDC4Q6P2E9 1401 aaKnown RBP8.11□□□□□ -1.11
NXF3-203ENST00000460791 NSD3Q9BZ95 1437 aa8.11□□□□□ -1.11
NXF3-203ENST00000460791 NINLQ9Y2I6 1382 aa8.1□□□□□ -1.11
NXF3-203ENST00000460791 LTN1O94822 1766 aa8.1□□□□□ -1.11
NXF3-203ENST00000460791 HOXD11P31277 338 aaPredicted RBP8.1□□□□□ -1.11
NXF3-203ENST00000460791 PRDM11Q9NQV5 511 aa8.1□□□□□ -1.11
NXF3-203ENST00000460791 USP21Q9UK80 565 aa8.1□□□□□ -1.11
NXF3-203ENST00000460791 BRD4O60885 1362 aaPredicted RBP8.1□□□□□ -1.11
NXF3-203ENST00000460791 KIAA0232Q92628 1395 aa8.1□□□□□ -1.11
NXF3-203ENST00000460791 USP19O94966 1318 aa8.09□□□□□ -1.11
NXF3-203ENST00000460791 TNNT2P45379 298 aaPredicted RBP8.09□□□□□ -1.11
NXF3-203ENST00000460791 COG3Q96JB2 828 aa8.09□□□□□ -1.11
NXF3-203ENST00000460791 QTRT2Q9H974 415 aaKnown RBP8.09□□□□□ -1.11
NXF3-203ENST00000460791 CCDC9Q9Y3X0 531 aaKnown RBP8.09□□□□□ -1.11
NXF3-203ENST00000460791 PLCH1Q4KWH8 1693 aa8.08□□□□□ -1.12
NXF3-203ENST00000460791 DDX10Q13206 875 aaKnown RBP8.08□□□□□ -1.12
NXF3-203ENST00000460791 STRN4Q9NRL3 753 aa8.08□□□□□ -1.12
NXF3-203ENST00000460791 BTG4Q9NY30 223 aa8.08□□□□□ -1.12
NXF3-203ENST00000460791 KNSTRNQ9Y448 316 aa8.08□□□□□ -1.12
NXF3-203ENST00000460791 RGPD2P0DJD1 1756 aa8.07□□□□□ -1.12
NXF3-203ENST00000460791 COL18A1P39060 1754 aa8.07□□□□□ -1.12
NXF3-203ENST00000460791 EVA1CP58658 441 aa8.07□□□□□ -1.12
NXF3-203ENST00000460791 RRS1Q15050 365 aaKnown RBP8.07□□□□□ -1.12
NXF3-203ENST00000460791 CC2D1BQ5T0F9 858 aaKnown RBP8.07□□□□□ -1.12
NXF3-203ENST00000460791 ILDR2Q71H61 639 aa8.07□□□□□ -1.12
NXF3-203ENST00000460791 FNBP4Q8N3X1 1017 aaPredicted RBP8.07□□□□□ -1.12
NXF3-203ENST00000460791 AXIN2Q9Y2T1 843 aa8.07□□□□□ -1.12
NXF3-203ENST00000460791 USP31Q70CQ4 1352 aa8.07□□□□□ -1.12
NXF3-203ENST00000460791 COL14A1Q05707 1796 aaKnown RBP8.07□□□□□ -1.12
NXF3-203ENST00000460791 CGNL1Q0VF96 1302 aa8.06□□□□□ -1.12
NXF3-203ENST00000460791 ZNF772Q68DY9 489 aaPredicted RBP8.06□□□□□ -1.12
NXF3-203ENST00000460791 ARHGEF25Q86VW2 580 aa8.06□□□□□ -1.12
NXF3-203ENST00000460791 UNC5CLQ8IV45 518 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms