RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 ATP7BP35670 1465 aa16.03■□□□□ 0.16
VAMP7-203ENST00000460621 ARHGEF28Q8N1W1 1705 aaKnown RBP16.02■□□□□ 0.16
VAMP7-203ENST00000460621 GPRASP1Q5JY77 1395 aa16.02■□□□□ 0.16
VAMP7-203ENST00000460621 FAM182BQ5T319 152 aa16.02■□□□□ 0.16
VAMP7-203ENST00000460621 NGDNQ8NEJ9 315 aaKnown RBP16.02■□□□□ 0.16
VAMP7-203ENST00000460621 STAC3Q96MF2 364 aa16.01■□□□□ 0.15
VAMP7-203ENST00000460621 CDK19Q9BWU1 502 aa16.01■□□□□ 0.15
VAMP7-203ENST00000460621 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
VAMP7-203ENST00000460621 SPATA31A5Q5VU36 1347 aa15.99■□□□□ 0.15
VAMP7-203ENST00000460621 SPATA31A7Q8IWB4 1347 aa15.99■□□□□ 0.15
VAMP7-203ENST00000460621 NUTM2GQ5VZR2 741 aa15.99■□□□□ 0.15
VAMP7-203ENST00000460621 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
VAMP7-203ENST00000460621 COL14A1Q05707 1796 aaKnown RBP15.98■□□□□ 0.15
VAMP7-203ENST00000460621 CHRNA2Q15822 529 aa15.98■□□□□ 0.15
VAMP7-203ENST00000460621 NBPF8Q3BBV2 869 aa15.97■□□□□ 0.15
VAMP7-203ENST00000460621 KIAA0232Q92628 1395 aa15.97■□□□□ 0.15
VAMP7-203ENST00000460621 ACEP12821 1306 aa15.96■□□□□ 0.15
VAMP7-203ENST00000460621 POLR3AO14802 1390 aaPredicted RBP15.96■□□□□ 0.15
VAMP7-203ENST00000460621 PLEKHG3A1L390 1219 aa15.95■□□□□ 0.14
VAMP7-203ENST00000460621 ZC3H6P61129 1189 aaKnown RBP15.95■□□□□ 0.14
VAMP7-203ENST00000460621 PRDM11Q9NQV5 511 aa15.95■□□□□ 0.14
VAMP7-203ENST00000460621 A0A0G2JS52 829 aa15.94■□□□□ 0.14
VAMP7-203ENST00000460621 MYT1Q01538 1121 aa15.94■□□□□ 0.14
VAMP7-203ENST00000460621 CCDC61Q9Y6R9 512 aa15.94■□□□□ 0.14
VAMP7-203ENST00000460621 TOPAZ1Q8N9V7 1692 aa15.94■□□□□ 0.14
VAMP7-203ENST00000460621 THSD7AQ9UPZ6 1657 aa15.94■□□□□ 0.14
VAMP7-203ENST00000460621 SPATA31A1Q5TZJ5 1347 aa15.94■□□□□ 0.14
VAMP7-203ENST00000460621 PSDA5PKW4 1024 aaPredicted RBP15.92■□□□□ 0.14
VAMP7-203ENST00000460621 EN1Q05925 392 aaPredicted RBP15.92■□□□□ 0.14
VAMP7-203ENST00000460621 SF3B2Q13435 895 aaKnown RBP15.92■□□□□ 0.14
VAMP7-203ENST00000460621 PHRF1Q9P1Y6 1649 aaKnown RBP15.92■□□□□ 0.14
VAMP7-203ENST00000460621 ITSN1Q15811 1721 aa15.91■□□□□ 0.14
VAMP7-203ENST00000460621 KIAA1210Q9ULL0 1709 aa15.91■□□□□ 0.14
VAMP7-203ENST00000460621 CABP2Q9NPB3 220 aa15.91■□□□□ 0.14
VAMP7-203ENST00000460621 STRN4Q9NRL3 753 aa15.91■□□□□ 0.14
VAMP7-203ENST00000460621 CAMTA1Q9Y6Y1 1673 aa15.9■□□□□ 0.14
VAMP7-203ENST00000460621 USP19O94966 1318 aa15.89■□□□□ 0.13
VAMP7-203ENST00000460621 BAG6P46379 1132 aa15.88■□□□□ 0.13
VAMP7-203ENST00000460621 LARP1Q6PKG0 1096 aaKnown RBP15.88■□□□□ 0.13
VAMP7-203ENST00000460621 ABTB2Q8N961 1025 aa15.88■□□□□ 0.13
VAMP7-203ENST00000460621 L3MBTL2Q969R5 705 aa15.88■□□□□ 0.13
VAMP7-203ENST00000460621 SIN3AQ96ST3 1273 aa15.88■□□□□ 0.13
VAMP7-203ENST00000460621 NRKQ7Z2Y5 1582 aa15.87■□□□□ 0.13
VAMP7-203ENST00000460621 USP35Q9P2H5 1018 aa15.87■□□□□ 0.13
VAMP7-203ENST00000460621 CENPJQ9HC77 1338 aaPredicted RBP15.87■□□□□ 0.13
VAMP7-203ENST00000460621 PPIP5K1Q6PFW1 1433 aa15.86■□□□□ 0.13
VAMP7-203ENST00000460621 SSH2Q76I76 1423 aa15.86■□□□□ 0.13
VAMP7-203ENST00000460621 SRPK2P78362 688 aaKnown RBP15.86■□□□□ 0.13
VAMP7-203ENST00000460621 EZH2Q15910 746 aaKnown RBP15.86■□□□□ 0.13
VAMP7-203ENST00000460621 CAMKK2Q96RR4 588 aa15.86■□□□□ 0.13
VAMP7-203ENST00000460621 LMO7Q8WWI1 1683 aa15.86■□□□□ 0.13
VAMP7-203ENST00000460621 TNS1Q9HBL0 1735 aaKnown RBP15.85■□□□□ 0.13
VAMP7-203ENST00000460621 TRIM37O94972 964 aa15.85■□□□□ 0.13
VAMP7-203ENST00000460621 GCP02774 474 aa15.85■□□□□ 0.13
VAMP7-203ENST00000460621 CABP1Q9NZU7 370 aa15.85■□□□□ 0.13
VAMP7-203ENST00000460621 CPDO75976 1380 aa15.85■□□□□ 0.13
VAMP7-203ENST00000460621 DISP2A7MBM2 1401 aa15.85■□□□□ 0.13
VAMP7-203ENST00000460621 BARGINQ6ZT62 677 aa15.84■□□□□ 0.13
VAMP7-203ENST00000460621 RGPD1P0DJD0 1748 aa15.83■□□□□ 0.13
VAMP7-203ENST00000460621 R3HDM1Q15032 1099 aaKnown RBP15.83■□□□□ 0.12
VAMP7-203ENST00000460621 EVA1CP58658 441 aa15.82■□□□□ 0.12
VAMP7-203ENST00000460621 FAM196AQ6ZSG2 479 aa15.82■□□□□ 0.12
VAMP7-203ENST00000460621 LRP5O75197 1615 aa15.81■□□□□ 0.12
VAMP7-203ENST00000460621 NLRP13Q86W25 1043 aa15.81■□□□□ 0.12
VAMP7-203ENST00000460621 QRICH2Q9H0J4 1663 aa15.8■□□□□ 0.12
VAMP7-203ENST00000460621 USP6P35125 1406 aa15.8■□□□□ 0.12
VAMP7-203ENST00000460621 TCP11L2Q8N4U5 519 aa15.8■□□□□ 0.12
VAMP7-203ENST00000460621 COL5A2P05997 1499 aaPredicted RBP15.79■□□□□ 0.12
VAMP7-203ENST00000460621 APBA3O96018 575 aa15.79■□□□□ 0.12
VAMP7-203ENST00000460621 AXIN2Q9Y2T1 843 aa15.79■□□□□ 0.12
VAMP7-203ENST00000460621 NLRP6P59044 892 aa15.78■□□□□ 0.12
VAMP7-203ENST00000460621 SLIT3O75094 1523 aa15.78■□□□□ 0.12
VAMP7-203ENST00000460621 PDE3BQ13370 1112 aa15.77■□□□□ 0.12
VAMP7-203ENST00000460621 NEUROD1Q13562 356 aa15.77■□□□□ 0.12
VAMP7-203ENST00000460621 PTF1AQ7RTS3 328 aa15.77■□□□□ 0.12
VAMP7-203ENST00000460621 COL18A1P39060 1754 aa15.77■□□□□ 0.11
VAMP7-203ENST00000460621 TRPM1Q7Z4N2 1603 aa15.76■□□□□ 0.11
VAMP7-203ENST00000460621 ZBTB7CA1YPR0 619 aa15.76■□□□□ 0.11
VAMP7-203ENST00000460621 PIK3C2AO00443 1686 aa15.76■□□□□ 0.11
VAMP7-203ENST00000460621 BRD4O60885 1362 aaPredicted RBP15.75■□□□□ 0.11
VAMP7-203ENST00000460621 AATKQ6ZMQ8 1374 aa15.75■□□□□ 0.11
VAMP7-203ENST00000460621 TTC21BQ7Z4L5 1316 aa15.74■□□□□ 0.11
VAMP7-203ENST00000460621 THRAP3Q9Y2W1 955 aaKnown RBP15.74■□□□□ 0.11
VAMP7-203ENST00000460621 CRB1P82279 1406 aa15.74■□□□□ 0.11
VAMP7-203ENST00000460621 EVC2Q86UK5 1308 aa15.73■□□□□ 0.11
VAMP7-203ENST00000460621 ARHGEF25Q86VW2 580 aa15.73■□□□□ 0.11
VAMP7-203ENST00000460621 PEAK1Q9H792 1746 aa15.73■□□□□ 0.11
VAMP7-203ENST00000460621 PARP4Q9UKK3 1724 aaKnown RBP15.72■□□□□ 0.11
VAMP7-203ENST00000460621 RREB1Q92766 1687 aa15.72■□□□□ 0.11
VAMP7-203ENST00000460621 CPSF1Q10570 1443 aaKnown RBP15.71■□□□□ 0.11
VAMP7-203ENST00000460621 ROCK2O75116 1388 aaKnown RBP15.71■□□□□ 0.11
VAMP7-203ENST00000460621 NUP188Q5SRE5 1749 aa15.71■□□□□ 0.1
VAMP7-203ENST00000460621 SOX12O15370 315 aa15.7■□□□□ 0.1
VAMP7-203ENST00000460621 MARCH10Q8NA82 808 aaPredicted RBP15.7■□□□□ 0.1
VAMP7-203ENST00000460621 PARD3Q8TEW0 1356 aa15.7■□□□□ 0.1
VAMP7-203ENST00000460621 TOM1L2Q6ZVM7 507 aa15.69■□□□□ 0.1
VAMP7-203ENST00000460621 AKAP12Q02952 1782 aa15.69■□□□□ 0.1
VAMP7-203ENST00000460621 WDR17Q8IZU2 1322 aa15.68■□□□□ 0.1
VAMP7-203ENST00000460621 LRRC37A3O60309 1634 aa15.68■□□□□ 0.1
VAMP7-203ENST00000460621 RGPD5Q99666 1765 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms