RNA–Protein interactions for RNA: ENST00000459931.1

NCDN-206, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 1,041 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-206ENST00000459931 KRT27Q7Z3Y8 459 aa22.58■■□□□ 1.21
NCDN-206ENST00000459931 PRDM11Q9NQV5 511 aa22.58■■□□□ 1.21
NCDN-206ENST00000459931 PLCH1Q4KWH8 1693 aa22.58■■□□□ 1.2
NCDN-206ENST00000459931 ACEP12821 1306 aa22.57■■□□□ 1.2
NCDN-206ENST00000459931 ABCA3Q99758 1704 aa22.57■■□□□ 1.2
NCDN-206ENST00000459931 NWD2Q9ULI1 1742 aa22.57■■□□□ 1.2
NCDN-206ENST00000459931 SRPK2P78362 688 aaKnown RBP22.57■■□□□ 1.2
NCDN-206ENST00000459931 SF3B2Q13435 895 aaKnown RBP22.57■■□□□ 1.2
NCDN-206ENST00000459931 NUTM2GQ5VZR2 741 aa22.57■■□□□ 1.2
NCDN-206ENST00000459931 L3MBTL2Q969R5 705 aa22.57■■□□□ 1.2
NCDN-206ENST00000459931 ALS2Q96Q42 1657 aa22.56■■□□□ 1.2
NCDN-206ENST00000459931 PLEKHG3A1L390 1219 aa22.56■■□□□ 1.2
NCDN-206ENST00000459931 FAM98CQ17RN3 349 aaKnown RBP22.56■■□□□ 1.2
NCDN-206ENST00000459931 SRCAPQ6ZRS2 3230 aa22.56■■□□□ 1.2
NCDN-206ENST00000459931 KIAA1210Q9ULL0 1709 aa22.55■■□□□ 1.2
NCDN-206ENST00000459931 CENPJQ9HC77 1338 aaPredicted RBP22.55■■□□□ 1.2
NCDN-206ENST00000459931 NEUROD1Q13562 356 aa22.54■■□□□ 1.2
NCDN-206ENST00000459931 SIN3AQ96ST3 1273 aa22.54■■□□□ 1.2
NCDN-206ENST00000459931 BLMP54132 1417 aaPredicted RBP22.54■■□□□ 1.2
NCDN-206ENST00000459931 ITSN1Q15811 1721 aa22.54■■□□□ 1.2
NCDN-206ENST00000459931 ZC3H6P61129 1189 aaKnown RBP22.53■■□□□ 1.2
NCDN-206ENST00000459931 TRIM26Q12899 539 aaPredicted RBP22.53■■□□□ 1.2
NCDN-206ENST00000459931 ABTB2Q8N961 1025 aa22.53■■□□□ 1.2
NCDN-206ENST00000459931 POLR3AO14802 1390 aaPredicted RBP22.52■■□□□ 1.2
NCDN-206ENST00000459931 CABP2Q9NPB3 220 aa22.52■■□□□ 1.2
NCDN-206ENST00000459931 COL14A1Q05707 1796 aaKnown RBP22.51■■□□□ 1.19
NCDN-206ENST00000459931 CHRNA2Q15822 529 aa22.51■■□□□ 1.19
NCDN-206ENST00000459931 KIAA0232Q92628 1395 aa22.5■■□□□ 1.19
NCDN-206ENST00000459931 BRWD3Q6RI45 1802 aa22.5■■□□□ 1.19
NCDN-206ENST00000459931 DEFB132Q7Z7B7 95 aa22.5■■□□□ 1.19
NCDN-206ENST00000459931 SPATA31A5Q5VU36 1347 aa22.5■■□□□ 1.19
NCDN-206ENST00000459931 SPATA31A7Q8IWB4 1347 aa22.5■■□□□ 1.19
NCDN-206ENST00000459931 STRN4Q9NRL3 753 aa22.49■■□□□ 1.19
NCDN-206ENST00000459931 EVA1CP58658 441 aa22.48■■□□□ 1.19
NCDN-206ENST00000459931 PPIP5K1Q6PFW1 1433 aa22.47■■□□□ 1.19
NCDN-206ENST00000459931 NLRP13Q86W25 1043 aa22.46■■□□□ 1.19
NCDN-206ENST00000459931 CABP1Q9NZU7 370 aa22.46■■□□□ 1.19
NCDN-206ENST00000459931 NRAPQ86VF7 1730 aa22.45■■□□□ 1.19
NCDN-206ENST00000459931 USP35Q9P2H5 1018 aa22.44■■□□□ 1.18
NCDN-206ENST00000459931 SPATA31A1Q5TZJ5 1347 aa22.43■■□□□ 1.18
NCDN-206ENST00000459931 EVC2Q86UK5 1308 aa22.43■■□□□ 1.18
NCDN-206ENST00000459931 FAM182BQ5T319 152 aa22.43■■□□□ 1.18
NCDN-206ENST00000459931 CRYBG1Q9Y4K1 1723 aa22.43■■□□□ 1.18
NCDN-206ENST00000459931 TOPAZ1Q8N9V7 1692 aa22.42■■□□□ 1.18
NCDN-206ENST00000459931 ROCK2O75116 1388 aaKnown RBP22.41■■□□□ 1.18
NCDN-206ENST00000459931 GCP02774 474 aa22.41■■□□□ 1.18
NCDN-206ENST00000459931 BAG6P46379 1132 aa22.41■■□□□ 1.18
NCDN-206ENST00000459931 NLRP6P59044 892 aa22.39■■□□□ 1.17
NCDN-206ENST00000459931 BRD4O60885 1362 aaPredicted RBP22.38■■□□□ 1.17
NCDN-206ENST00000459931 USP19O94966 1318 aa22.38■■□□□ 1.17
NCDN-206ENST00000459931 QRICH2Q9H0J4 1663 aa22.38■■□□□ 1.17
NCDN-206ENST00000459931 PHRF1Q9P1Y6 1649 aaKnown RBP22.38■■□□□ 1.17
NCDN-206ENST00000459931 LARP1Q6PKG0 1096 aaKnown RBP22.37■■□□□ 1.17
NCDN-206ENST00000459931 CPDO75976 1380 aa22.37■■□□□ 1.17
NCDN-206ENST00000459931 ZBTB7CA1YPR0 619 aa22.36■■□□□ 1.17
NCDN-206ENST00000459931 USP6P35125 1406 aa22.34■■□□□ 1.17
NCDN-206ENST00000459931 EN1Q05925 392 aaPredicted RBP22.34■■□□□ 1.17
NCDN-206ENST00000459931 PDE3BQ13370 1112 aa22.34■■□□□ 1.17
NCDN-206ENST00000459931 FAM196AQ6ZSG2 479 aa22.34■■□□□ 1.17
NCDN-206ENST00000459931 BARGINQ6ZT62 677 aa22.34■■□□□ 1.17
NCDN-206ENST00000459931 TCP11L2Q8N4U5 519 aa22.34■■□□□ 1.17
NCDN-206ENST00000459931 ZNF692Q9BU19 519 aaPredicted RBP22.34■■□□□ 1.17
NCDN-206ENST00000459931 SSH2Q76I76 1423 aa22.33■■□□□ 1.17
NCDN-206ENST00000459931 TRPM1Q7Z4N2 1603 aa22.33■■□□□ 1.17
NCDN-206ENST00000459931 CAMTA1Q9Y6Y1 1673 aa22.33■■□□□ 1.16
NCDN-206ENST00000459931 NRKQ7Z2Y5 1582 aa22.31■■□□□ 1.16
NCDN-206ENST00000459931 THSD7AQ9UPZ6 1657 aa22.3■■□□□ 1.16
NCDN-206ENST00000459931 TRIM37O94972 964 aa22.3■■□□□ 1.16
NCDN-206ENST00000459931 THRAP3Q9Y2W1 955 aaKnown RBP22.3■■□□□ 1.16
NCDN-206ENST00000459931 CARD11Q9BXL7 1154 aa22.29■■□□□ 1.16
NCDN-206ENST00000459931 PSDA5PKW4 1024 aaPredicted RBP22.27■■□□□ 1.16
NCDN-206ENST00000459931 TTC21BQ7Z4L5 1316 aa22.27■■□□□ 1.16
NCDN-206ENST00000459931 APBA3O96018 575 aa22.26■■□□□ 1.15
NCDN-206ENST00000459931 AATKQ6ZMQ8 1374 aa22.25■■□□□ 1.15
NCDN-206ENST00000459931 SOX12O15370 315 aa22.25■■□□□ 1.15
NCDN-206ENST00000459931 EZH2Q15910 746 aaKnown RBP22.25■■□□□ 1.15
NCDN-206ENST00000459931 KCNH5Q8NCM2 988 aa22.25■■□□□ 1.15
NCDN-206ENST00000459931 TONSLQ96HA7 1378 aa22.25■■□□□ 1.15
NCDN-206ENST00000459931 COL5A2P05997 1499 aaPredicted RBP22.24■■□□□ 1.15
NCDN-206ENST00000459931 TOM1L2Q6ZVM7 507 aa22.24■■□□□ 1.15
NCDN-206ENST00000459931 LMO7Q8WWI1 1683 aa22.23■■□□□ 1.15
NCDN-206ENST00000459931 RGPD1P0DJD0 1748 aa22.23■■□□□ 1.15
NCDN-206ENST00000459931 TTC21AQ8NDW8 1320 aa22.23■■□□□ 1.15
NCDN-206ENST00000459931 KTN1Q86UP2 1357 aaKnown RBP22.23■■□□□ 1.15
NCDN-206ENST00000459931 CRB1P82279 1406 aa22.23■■□□□ 1.15
NCDN-206ENST00000459931 AXIN2Q9Y2T1 843 aa22.22■■□□□ 1.15
NCDN-206ENST00000459931 ARHGEF25Q86VW2 580 aa22.21■■□□□ 1.15
NCDN-206ENST00000459931 TMC1Q8TDI8 760 aa22.21■■□□□ 1.15
NCDN-206ENST00000459931 CAMKK2Q96RR4 588 aa22.21■■□□□ 1.15
NCDN-206ENST00000459931 SLIT3O75094 1523 aa22.21■■□□□ 1.15
NCDN-206ENST00000459931 R3HDM1Q15032 1099 aaKnown RBP22.2■■□□□ 1.14
NCDN-206ENST00000459931 PCGF6Q9BYE7 350 aa22.2■■□□□ 1.14
NCDN-206ENST00000459931 DISP2A7MBM2 1401 aa22.2■■□□□ 1.14
NCDN-206ENST00000459931 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.19■■□□□ 1.14
NCDN-206ENST00000459931 CPSF1Q10570 1443 aaKnown RBP22.19■■□□□ 1.14
NCDN-206ENST00000459931 PIK3C2AO00443 1686 aa22.18■■□□□ 1.14
NCDN-206ENST00000459931 SBNO2Q9Y2G9 1366 aa22.18■■□□□ 1.14
NCDN-206ENST00000459931 C11orf95C9JLR9 678 aaPredicted RBP22.18■■□□□ 1.14
NCDN-206ENST00000459931 CSB-PGBD3P0DP91 1061 aa22.18■■□□□ 1.14
NCDN-206ENST00000459931 DDB1Q16531 1140 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms