RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 ACIN1Q9UKV3 1341 aaKnown RBP22.2■■□□□ 1.14
LMNA-209ENST00000459904 PSDA5PKW4 1024 aaPredicted RBP22.19■■□□□ 1.14
LMNA-209ENST00000459904 ONECUT3O60422 494 aaPredicted RBP22.19■■□□□ 1.14
LMNA-209ENST00000459904 SF3B2Q13435 895 aaKnown RBP22.19■■□□□ 1.14
LMNA-209ENST00000459904 ITSN1Q15811 1721 aa22.18■■□□□ 1.14
LMNA-209ENST00000459904 WASLO00401 505 aaPredicted RBP22.18■■□□□ 1.14
LMNA-209ENST00000459904 NUTM2GQ5VZR2 741 aa22.18■■□□□ 1.14
LMNA-209ENST00000459904 GPRASP1Q5JY77 1395 aa22.17■■□□□ 1.14
LMNA-209ENST00000459904 NGDNQ8NEJ9 315 aaKnown RBP22.17■■□□□ 1.14
LMNA-209ENST00000459904 PHRF1Q9P1Y6 1649 aaKnown RBP22.17■■□□□ 1.14
LMNA-209ENST00000459904 CHRNA2Q15822 529 aa22.16■■□□□ 1.14
LMNA-209ENST00000459904 RGPD1P0DJD0 1748 aa22.14■■□□□ 1.13
LMNA-209ENST00000459904 TNS1Q9HBL0 1735 aaKnown RBP22.13■■□□□ 1.13
LMNA-209ENST00000459904 THSD7AQ9UPZ6 1657 aa22.12■■□□□ 1.13
LMNA-209ENST00000459904 ATP7BP35670 1465 aa22.12■■□□□ 1.13
LMNA-209ENST00000459904 EN1Q05925 392 aaPredicted RBP22.12■■□□□ 1.13
LMNA-209ENST00000459904 ZC3H6P61129 1189 aaKnown RBP22.11■■□□□ 1.13
LMNA-209ENST00000459904 NUDT16Q96DE0 195 aaKnown RBP22.11■■□□□ 1.13
LMNA-209ENST00000459904 SPATA31A5Q5VU36 1347 aa22.1■■□□□ 1.13
LMNA-209ENST00000459904 SPATA31A7Q8IWB4 1347 aa22.1■■□□□ 1.13
LMNA-209ENST00000459904 PRDM11Q9NQV5 511 aa22.1■■□□□ 1.13
LMNA-209ENST00000459904 TOPAZ1Q8N9V7 1692 aa22.1■■□□□ 1.13
LMNA-209ENST00000459904 STRN4Q9NRL3 753 aa22.09■■□□□ 1.13
LMNA-209ENST00000459904 KIAA0232Q92628 1395 aa22.09■■□□□ 1.13
LMNA-209ENST00000459904 CDK19Q9BWU1 502 aa22.08■■□□□ 1.13
LMNA-209ENST00000459904 EIF3AQ14152 1382 aaKnown RBP22.08■■□□□ 1.12
LMNA-209ENST00000459904 BAG6P46379 1132 aa22.07■■□□□ 1.12
LMNA-209ENST00000459904 LRP5O75197 1615 aa22.06■■□□□ 1.12
LMNA-209ENST00000459904 USP35Q9P2H5 1018 aa22.06■■□□□ 1.12
LMNA-209ENST00000459904 NBPF1Q3BBV0 1214 aa22.05■■□□□ 1.12
LMNA-209ENST00000459904 ACEP12821 1306 aa22.04■■□□□ 1.12
LMNA-209ENST00000459904 HRCP23327 699 aa22.03■■□□□ 1.12
LMNA-209ENST00000459904 EZH2Q15910 746 aaKnown RBP22.03■■□□□ 1.12
LMNA-209ENST00000459904 SPATA31A1Q5TZJ5 1347 aa22.03■■□□□ 1.12
LMNA-209ENST00000459904 R3HDM1Q15032 1099 aaKnown RBP22.02■■□□□ 1.12
LMNA-209ENST00000459904 NRKQ7Z2Y5 1582 aa22.01■■□□□ 1.11
LMNA-209ENST00000459904 TRIM37O94972 964 aa22.01■■□□□ 1.11
LMNA-209ENST00000459904 KIAA1210Q9ULL0 1709 aa22■■□□□ 1.11
LMNA-209ENST00000459904 NBPF8Q3BBV2 869 aa22■■□□□ 1.11
LMNA-209ENST00000459904 CAMTA1Q9Y6Y1 1673 aa22■■□□□ 1.11
LMNA-209ENST00000459904 QRICH2Q9H0J4 1663 aa21.98■■□□□ 1.11
LMNA-209ENST00000459904 LARP1Q6PKG0 1096 aaKnown RBP21.97■■□□□ 1.11
LMNA-209ENST00000459904 LMO7Q8WWI1 1683 aa21.97■■□□□ 1.11
LMNA-209ENST00000459904 ZBTB7CA1YPR0 619 aa21.96■■□□□ 1.11
LMNA-209ENST00000459904 CABP2Q9NPB3 220 aa21.96■■□□□ 1.11
LMNA-209ENST00000459904 POLR3AO14802 1390 aaPredicted RBP21.96■■□□□ 1.11
LMNA-209ENST00000459904 SSH2Q76I76 1423 aa21.96■■□□□ 1.11
LMNA-209ENST00000459904 EVA1CP58658 441 aa21.95■■□□□ 1.1
LMNA-209ENST00000459904 ABTB2Q8N961 1025 aa21.95■■□□□ 1.1
LMNA-209ENST00000459904 RGPD5Q99666 1765 aa21.94■■□□□ 1.1
LMNA-209ENST00000459904 CCDC61Q9Y6R9 512 aa21.94■■□□□ 1.1
LMNA-209ENST00000459904 NUP188Q5SRE5 1749 aa21.94■■□□□ 1.1
LMNA-209ENST00000459904 RREB1Q92766 1687 aa21.93■■□□□ 1.1
LMNA-209ENST00000459904 STAC3Q96MF2 364 aa21.93■■□□□ 1.1
LMNA-209ENST00000459904 PPIP5K1Q6PFW1 1433 aa21.92■■□□□ 1.1
LMNA-209ENST00000459904 PLEKHG3A1L390 1219 aa21.92■■□□□ 1.1
LMNA-209ENST00000459904 APBA3O96018 575 aa21.92■■□□□ 1.1
LMNA-209ENST00000459904 SRPK2P78362 688 aaKnown RBP21.92■■□□□ 1.1
LMNA-209ENST00000459904 CAMKK2Q96RR4 588 aa21.92■■□□□ 1.1
LMNA-209ENST00000459904 DISP2A7MBM2 1401 aa21.9■■□□□ 1.1
LMNA-209ENST00000459904 SBF2Q86WG5 1849 aa21.9■■□□□ 1.1
LMNA-209ENST00000459904 FAM196AQ6ZSG2 479 aa21.89■■□□□ 1.09
LMNA-209ENST00000459904 USP19O94966 1318 aa21.88■■□□□ 1.09
LMNA-209ENST00000459904 CENPJQ9HC77 1338 aaPredicted RBP21.87■■□□□ 1.09
LMNA-209ENST00000459904 PARP4Q9UKK3 1724 aaKnown RBP21.87■■□□□ 1.09
LMNA-209ENST00000459904 GCP02774 474 aa21.87■■□□□ 1.09
LMNA-209ENST00000459904 PDE3BQ13370 1112 aa21.87■■□□□ 1.09
LMNA-209ENST00000459904 TCP11L2Q8N4U5 519 aa21.86■■□□□ 1.09
LMNA-209ENST00000459904 PIK3C2AO00443 1686 aa21.85■■□□□ 1.09
LMNA-209ENST00000459904 COL18A1P39060 1754 aa21.85■■□□□ 1.09
LMNA-209ENST00000459904 BARGINQ6ZT62 677 aa21.85■■□□□ 1.09
LMNA-209ENST00000459904 CABP1Q9NZU7 370 aa21.85■■□□□ 1.09
LMNA-209ENST00000459904 COL5A2P05997 1499 aaPredicted RBP21.84■■□□□ 1.09
LMNA-209ENST00000459904 WNK3Q9BYP7 1800 aa21.84■■□□□ 1.09
LMNA-209ENST00000459904 NLRP13Q86W25 1043 aa21.83■■□□□ 1.09
LMNA-209ENST00000459904 CPDO75976 1380 aa21.83■■□□□ 1.08
LMNA-209ENST00000459904 LRRC37A3O60309 1634 aa21.82■■□□□ 1.08
LMNA-209ENST00000459904 SIN3AQ96ST3 1273 aa21.82■■□□□ 1.08
LMNA-209ENST00000459904 TRPM1Q7Z4N2 1603 aa21.81■■□□□ 1.08
LMNA-209ENST00000459904 PEAK1Q9H792 1746 aa21.81■■□□□ 1.08
LMNA-209ENST00000459904 NLRP6P59044 892 aa21.81■■□□□ 1.08
LMNA-209ENST00000459904 PTF1AQ7RTS3 328 aa21.81■■□□□ 1.08
LMNA-209ENST00000459904 AKAP12Q02952 1782 aa21.81■■□□□ 1.08
LMNA-209ENST00000459904 SOX12O15370 315 aa21.8■■□□□ 1.08
LMNA-209ENST00000459904 L3MBTL2Q969R5 705 aa21.8■■□□□ 1.08
LMNA-209ENST00000459904 USP6P35125 1406 aa21.8■■□□□ 1.08
LMNA-209ENST00000459904 AXIN2Q9Y2T1 843 aa21.78■■□□□ 1.08
LMNA-209ENST00000459904 SLIT3O75094 1523 aa21.78■■□□□ 1.08
LMNA-209ENST00000459904 KAT6BQ8WYB5 2073 aa21.76■■□□□ 1.07
LMNA-209ENST00000459904 CRB1P82279 1406 aa21.76■■□□□ 1.07
LMNA-209ENST00000459904 NEUROD1Q13562 356 aa21.75■■□□□ 1.07
LMNA-209ENST00000459904 TOM1L2Q6ZVM7 507 aa21.74■■□□□ 1.07
LMNA-209ENST00000459904 THRAP3Q9Y2W1 955 aaKnown RBP21.73■■□□□ 1.07
LMNA-209ENST00000459904 AATKQ6ZMQ8 1374 aa21.72■■□□□ 1.07
LMNA-209ENST00000459904 PARD3Q8TEW0 1356 aa21.72■■□□□ 1.07
LMNA-209ENST00000459904 NBPF14Q5TI25 921 aa21.7■■□□□ 1.06
LMNA-209ENST00000459904 PDGFDQ9GZP0 370 aaPredicted RBP21.7■■□□□ 1.06
LMNA-209ENST00000459904 ANO8Q9HCE9 1232 aaPredicted RBP21.7■■□□□ 1.06
LMNA-209ENST00000459904 OVOS2A0A0G2JMS6 1433 aa21.7■■□□□ 1.06
LMNA-209ENST00000459904 OVOS2A0A0J9YW53 1432 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms