RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 ZBTB3Q9H5J0 574 aa8.28□□□□□ -1.08
SSX2IP-204ENST00000459708 SENP2Q9HC62 589 aa8.28□□□□□ -1.08
SSX2IP-204ENST00000459708 TUSC1Q2TAM9 212 aa8.27□□□□□ -1.09
SSX2IP-204ENST00000459708 PRPF38BQ5VTL8 546 aaKnown RBP8.27□□□□□ -1.09
SSX2IP-204ENST00000459708 HPS1Q92902 700 aa8.27□□□□□ -1.09
SSX2IP-204ENST00000459708 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.27□□□□□ -1.09
SSX2IP-204ENST00000459708 CFAP99D6REC4 459 aa8.26□□□□□ -1.09
SSX2IP-204ENST00000459708 LILRB3O75022 631 aa8.26□□□□□ -1.09
SSX2IP-204ENST00000459708 DXOO77932 396 aaKnown RBP8.26□□□□□ -1.09
SSX2IP-204ENST00000459708 PRR7Q8TB68 274 aa8.26□□□□□ -1.09
SSX2IP-204ENST00000459708 RTL5Q5HYW3 569 aaPredicted RBP8.25□□□□□ -1.09
SSX2IP-204ENST00000459708 CCDC24Q8N4L8 307 aa8.25□□□□□ -1.09
SSX2IP-204ENST00000459708 GOPCQ9HD26 462 aa8.25□□□□□ -1.09
SSX2IP-204ENST00000459708 SPDYE5A6NIY4 337 aa8.24□□□□□ -1.09
SSX2IP-204ENST00000459708 JUNDP17535 347 aa8.24□□□□□ -1.09
SSX2IP-204ENST00000459708 PCMTD1Q96MG8 357 aaPredicted RBP8.24□□□□□ -1.09
SSX2IP-204ENST00000459708 ATP1B4Q9UN42 357 aaPredicted RBP8.24□□□□□ -1.09
SSX2IP-204ENST00000459708 NUTM2BA6NNL0 878 aaPredicted RBP8.23□□□□□ -1.09
SSX2IP-204ENST00000459708 NUTM2EB1AL46 878 aaPredicted RBP8.23□□□□□ -1.09
SSX2IP-204ENST00000459708 RC3H1Q5TC82 1133 aaKnown RBP8.23□□□□□ -1.09
SSX2IP-204ENST00000459708 NUTM2DQ5VT03 806 aaPredicted RBP8.23□□□□□ -1.09
SSX2IP-204ENST00000459708 NUTM2AQ8IVF1 878 aaPredicted RBP8.23□□□□□ -1.09
SSX2IP-204ENST00000459708 KIFC2Q96AC6 838 aa8.23□□□□□ -1.09
SSX2IP-204ENST00000459708 SKOR1P84550 965 aa8.22□□□□□ -1.09
SSX2IP-204ENST00000459708 TSC1Q92574 1164 aa8.21□□□□□ -1.1
SSX2IP-204ENST00000459708 WNT7BP56706 349 aa8.2□□□□□ -1.1
SSX2IP-204ENST00000459708 PER1O15534 1290 aaPredicted RBP8.19□□□□□ -1.1
SSX2IP-204ENST00000459708 ALDH1A1P00352 501 aa8.19□□□□□ -1.1
SSX2IP-204ENST00000459708 PPP2R2DQ66LE6 453 aa8.19□□□□□ -1.1
SSX2IP-204ENST00000459708 DESI1Q6ICB0 168 aa8.19□□□□□ -1.1
SSX2IP-204ENST00000459708 BMP1P13497 986 aa8.18□□□□□ -1.1
SSX2IP-204ENST00000459708 RFC5P40937 340 aa8.18□□□□□ -1.1
SSX2IP-204ENST00000459708 PTPRNQ16849 979 aa8.18□□□□□ -1.1
SSX2IP-204ENST00000459708 NUDT12Q9BQG2 462 aa8.18□□□□□ -1.1
SSX2IP-204ENST00000459708 CCNYL3P0C7X3 344 aa8.17□□□□□ -1.1
SSX2IP-204ENST00000459708 HELBQ8NG08 1087 aaPredicted RBP8.17□□□□□ -1.1
SSX2IP-204ENST00000459708 SLC16A10Q8TF71 515 aa8.17□□□□□ -1.1
SSX2IP-204ENST00000459708 LYPD8Q6UX82 237 aa8.16□□□□□ -1.1
SSX2IP-204ENST00000459708 CTDSPL2Q05D32 466 aa8.15□□□□□ -1.1
SSX2IP-204ENST00000459708 MAP10Q9P2G4 905 aa8.15□□□□□ -1.1
SSX2IP-204ENST00000459708 NXF1Q9UBU9 619 aaKnown RBP8.15□□□□□ -1.1
SSX2IP-204ENST00000459708 FAM181BA6NEQ2 426 aa8.14□□□□□ -1.11
SSX2IP-204ENST00000459708 AP1G2O75843 785 aa8.14□□□□□ -1.11
SSX2IP-204ENST00000459708 F12P00748 615 aaPredicted RBP8.14□□□□□ -1.11
SSX2IP-204ENST00000459708 USP17L8P0C7I0 530 aa8.14□□□□□ -1.11
SSX2IP-204ENST00000459708 GMPRP36959 345 aa8.14□□□□□ -1.11
SSX2IP-204ENST00000459708 TRIM46Q7Z4K8 759 aa8.14□□□□□ -1.11
SSX2IP-204ENST00000459708 EHBP1Q8NDI1 1231 aa8.14□□□□□ -1.11
SSX2IP-204ENST00000459708 PTCRAQ6ISU1 281 aaPredicted RBP8.13□□□□□ -1.11
SSX2IP-204ENST00000459708 LRRN4Q8WUT4 740 aa8.13□□□□□ -1.11
SSX2IP-204ENST00000459708 WASF2Q9Y6W5 498 aa8.13□□□□□ -1.11
SSX2IP-204ENST00000459708 CAPN5O15484 640 aaPredicted RBP8.12□□□□□ -1.11
SSX2IP-204ENST00000459708 VEGFBP49765 207 aa8.12□□□□□ -1.11
SSX2IP-204ENST00000459708 TMEM132AQ24JP5 1023 aa8.12□□□□□ -1.11
SSX2IP-204ENST00000459708 SIAH2O43255 324 aa8.11□□□□□ -1.11
SSX2IP-204ENST00000459708 CTHP32929 405 aa8.11□□□□□ -1.11
SSX2IP-204ENST00000459708 ZSCAN1Q8NBB4 408 aa8.11□□□□□ -1.11
SSX2IP-204ENST00000459708 IRF7Q92985 503 aa8.11□□□□□ -1.11
SSX2IP-204ENST00000459708 HMX1Q9NP08 348 aaPredicted RBP8.11□□□□□ -1.11
SSX2IP-204ENST00000459708 EVA1BQ9NVM1 165 aa8.11□□□□□ -1.11
SSX2IP-204ENST00000459708 KCNH2Q12809 1159 aa8.1□□□□□ -1.11
SSX2IP-204ENST00000459708 UNC93B1Q9H1C4 597 aa8.1□□□□□ -1.11
SSX2IP-204ENST00000459708 LORP23490 312 aaPredicted RBP8.09□□□□□ -1.11
SSX2IP-204ENST00000459708 H3BM21 787 aa8.08□□□□□ -1.12
SSX2IP-204ENST00000459708 LINC01559Q495D7 138 aa8.08□□□□□ -1.12
SSX2IP-204ENST00000459708 TMEM259Q4ZIN3 620 aa8.08□□□□□ -1.12
SSX2IP-204ENST00000459708 NPAS3Q8IXF0 933 aa8.08□□□□□ -1.12
SSX2IP-204ENST00000459708 SH3BP2P78314 561 aa8.07□□□□□ -1.12
SSX2IP-204ENST00000459708 EPS8L1Q8TE68 723 aa8.07□□□□□ -1.12
SSX2IP-204ENST00000459708 TLL2Q9Y6L7 1015 aa8.07□□□□□ -1.12
SSX2IP-204ENST00000459708 ERBB4Q15303 1308 aa8.06□□□□□ -1.12
SSX2IP-204ENST00000459708 NR6A1Q15406 480 aa8.06□□□□□ -1.12
SSX2IP-204ENST00000459708 MTMR14Q8NCE2 650 aa8.05□□□□□ -1.12
SSX2IP-204ENST00000459708 ZFP42Q96MM3 310 aa8.05□□□□□ -1.12
SSX2IP-204ENST00000459708 TRIM34Q9BYJ4 488 aa8.05□□□□□ -1.12
SSX2IP-204ENST00000459708 SNRKQ9NRH2 765 aa8.05□□□□□ -1.12
SSX2IP-204ENST00000459708 BAP1Q92560 729 aa8.04□□□□□ -1.12
SSX2IP-204ENST00000459708 GJD4Q96KN9 370 aaPredicted RBP8.04□□□□□ -1.12
SSX2IP-204ENST00000459708 ZNF511Q8NB15 262 aa8.03□□□□□ -1.12
SSX2IP-204ENST00000459708 BANK1Q8NDB2 785 aa8.03□□□□□ -1.12
SSX2IP-204ENST00000459708 MCM6Q14566 821 aa8.02□□□□□ -1.13
SSX2IP-204ENST00000459708 NNTQ13423 1086 aa8.01□□□□□ -1.13
SSX2IP-204ENST00000459708 MRPL14Q6P1L8 145 aaKnown RBP8.01□□□□□ -1.13
SSX2IP-204ENST00000459708 GPR37L1O60883 481 aa8□□□□□ -1.13
SSX2IP-204ENST00000459708 NBPF14Q5TI25 921 aa8□□□□□ -1.13
SSX2IP-204ENST00000459708 FOXJ1Q92949 421 aa8□□□□□ -1.13
SSX2IP-204ENST00000459708 PURBQ96QR8 312 aaKnown RBP8□□□□□ -1.13
SSX2IP-204ENST00000459708 FKBPLQ9UIM3 349 aa8□□□□□ -1.13
SSX2IP-204ENST00000459708 SOBPA7XYQ1 873 aa7.99□□□□□ -1.13
SSX2IP-204ENST00000459708 SOCS7O14512 581 aa7.99□□□□□ -1.13
SSX2IP-204ENST00000459708 SCARF1Q14162 830 aa7.99□□□□□ -1.13
SSX2IP-204ENST00000459708 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
SSX2IP-204ENST00000459708 ARMC2Q8NEN0 867 aa7.99□□□□□ -1.13
SSX2IP-204ENST00000459708 ADH1CP00326 375 aa7.98□□□□□ -1.13
SSX2IP-204ENST00000459708 TIMP2P16035 220 aa7.98□□□□□ -1.13
SSX2IP-204ENST00000459708 WDR4P57081 412 aaKnown RBP7.98□□□□□ -1.13
SSX2IP-204ENST00000459708 VARSP26640 1264 aaKnown RBP7.97□□□□□ -1.13
SSX2IP-204ENST00000459708 SH3BP5LQ7L8J4 393 aa7.97□□□□□ -1.13
SSX2IP-204ENST00000459708 LOC100996750A0A140TA64 210 aa7.96□□□□□ -1.14
SSX2IP-204ENST00000459708 SH3RF1Q7Z6J0 888 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms