RNA–Protein interactions for RNA: ENST00000458715.5

COL16A1-205, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-205ENST00000458715 TRPM3Q9HCF6 1732 aaPredicted RBP22.86■■□□□ 1.25
COL16A1-205ENST00000458715 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.85■■□□□ 1.25
COL16A1-205ENST00000458715 CABP2Q9NPB3 220 aa22.85■■□□□ 1.25
COL16A1-205ENST00000458715 CCDC9Q9Y3X0 531 aaKnown RBP22.85■■□□□ 1.25
COL16A1-205ENST00000458715 BRD4O60885 1362 aaPredicted RBP22.85■■□□□ 1.25
COL16A1-205ENST00000458715 CCDC125Q86Z20 511 aa22.84■■□□□ 1.25
COL16A1-205ENST00000458715 RALGAPBQ86X10 1494 aa22.84■■□□□ 1.25
COL16A1-205ENST00000458715 ALS2Q96Q42 1657 aa22.84■■□□□ 1.25
COL16A1-205ENST00000458715 BTG4Q9NY30 223 aa22.83■■□□□ 1.25
COL16A1-205ENST00000458715 TONSLQ96HA7 1378 aa22.83■■□□□ 1.25
COL16A1-205ENST00000458715 ONECUT3O60422 494 aaPredicted RBP22.82■■□□□ 1.24
COL16A1-205ENST00000458715 ABTB2Q8N961 1025 aa22.82■■□□□ 1.24
COL16A1-205ENST00000458715 PRDM11Q9NQV5 511 aa22.82■■□□□ 1.24
COL16A1-205ENST00000458715 PPIP5K1Q6PFW1 1433 aa22.82■■□□□ 1.24
COL16A1-205ENST00000458715 NWD2Q9ULI1 1742 aa22.8■■□□□ 1.24
COL16A1-205ENST00000458715 TRPM1Q7Z4N2 1603 aa22.8■■□□□ 1.24
COL16A1-205ENST00000458715 NLRP13Q86W25 1043 aa22.79■■□□□ 1.24
COL16A1-205ENST00000458715 CABP1Q9NZU7 370 aa22.79■■□□□ 1.24
COL16A1-205ENST00000458715 SEPT12Q8IYM1 358 aa22.78■■□□□ 1.24
COL16A1-205ENST00000458715 ABCA3Q99758 1704 aa22.78■■□□□ 1.24
COL16A1-205ENST00000458715 TOPAZ1Q8N9V7 1692 aa22.77■■□□□ 1.24
COL16A1-205ENST00000458715 ZNF692Q9BU19 519 aaPredicted RBP22.77■■□□□ 1.24
COL16A1-205ENST00000458715 CARD11Q9BXL7 1154 aa22.77■■□□□ 1.24
COL16A1-205ENST00000458715 NUTM2GQ5VZR2 741 aa22.76■■□□□ 1.23
COL16A1-205ENST00000458715 QRICH2Q9H0J4 1663 aa22.76■■□□□ 1.23
COL16A1-205ENST00000458715 COL14A1Q05707 1796 aaKnown RBP22.76■■□□□ 1.23
COL16A1-205ENST00000458715 GLI3P10071 1580 aa22.76■■□□□ 1.23
COL16A1-205ENST00000458715 PLCH1Q4KWH8 1693 aa22.74■■□□□ 1.23
COL16A1-205ENST00000458715 KIAA0232Q92628 1395 aa22.74■■□□□ 1.23
COL16A1-205ENST00000458715 ZC3H6P61129 1189 aaKnown RBP22.73■■□□□ 1.23
COL16A1-205ENST00000458715 SBNO2Q9Y2G9 1366 aa22.73■■□□□ 1.23
COL16A1-205ENST00000458715 KRT27Q7Z3Y8 459 aa22.72■■□□□ 1.23
COL16A1-205ENST00000458715 USP19O94966 1318 aa22.72■■□□□ 1.23
COL16A1-205ENST00000458715 SPATA31A5Q5VU36 1347 aa22.72■■□□□ 1.23
COL16A1-205ENST00000458715 SPATA31A7Q8IWB4 1347 aa22.72■■□□□ 1.23
COL16A1-205ENST00000458715 A0A0G2JS52 829 aa22.71■■□□□ 1.23
COL16A1-205ENST00000458715 SLC24A1O60721 1099 aa22.71■■□□□ 1.23
COL16A1-205ENST00000458715 MYT1Q01538 1121 aa22.71■■□□□ 1.23
COL16A1-205ENST00000458715 USP6P35125 1406 aa22.71■■□□□ 1.23
COL16A1-205ENST00000458715 GCP02774 474 aa22.7■■□□□ 1.22
COL16A1-205ENST00000458715 EVA1CP58658 441 aa22.7■■□□□ 1.22
COL16A1-205ENST00000458715 FAM98CQ17RN3 349 aaKnown RBP22.7■■□□□ 1.22
COL16A1-205ENST00000458715 CPDO75976 1380 aa22.69■■□□□ 1.22
COL16A1-205ENST00000458715 NLRP6P59044 892 aa22.69■■□□□ 1.22
COL16A1-205ENST00000458715 CHRNA2Q15822 529 aa22.69■■□□□ 1.22
COL16A1-205ENST00000458715 SF3B2Q13435 895 aaKnown RBP22.68■■□□□ 1.22
COL16A1-205ENST00000458715 CRYBG1Q9Y4K1 1723 aa22.68■■□□□ 1.22
COL16A1-205ENST00000458715 BLMP54132 1417 aaPredicted RBP22.66■■□□□ 1.22
COL16A1-205ENST00000458715 PUS7Q96PZ0 661 aaKnown RBP22.66■■□□□ 1.22
COL16A1-205ENST00000458715 STRN4Q9NRL3 753 aa22.66■■□□□ 1.22
COL16A1-205ENST00000458715 SPATA31A1Q5TZJ5 1347 aa22.65■■□□□ 1.22
COL16A1-205ENST00000458715 NRAPQ86VF7 1730 aa22.65■■□□□ 1.22
COL16A1-205ENST00000458715 TTC21AQ8NDW8 1320 aa22.64■■□□□ 1.22
COL16A1-205ENST00000458715 SSH2Q76I76 1423 aa22.64■■□□□ 1.21
COL16A1-205ENST00000458715 KCNH5Q8NCM2 988 aa22.63■■□□□ 1.21
COL16A1-205ENST00000458715 PHRF1Q9P1Y6 1649 aaKnown RBP22.63■■□□□ 1.21
COL16A1-205ENST00000458715 TTC21BQ7Z4L5 1316 aa22.62■■□□□ 1.21
COL16A1-205ENST00000458715 ZRANB1Q9UGI0 708 aa22.61■■□□□ 1.21
COL16A1-205ENST00000458715 TIMELESSQ9UNS1 1208 aa22.61■■□□□ 1.21
COL16A1-205ENST00000458715 CPSF1Q10570 1443 aaKnown RBP22.6■■□□□ 1.21
COL16A1-205ENST00000458715 BARGINQ6ZT62 677 aa22.6■■□□□ 1.21
COL16A1-205ENST00000458715 KTN1Q86UP2 1357 aaKnown RBP22.6■■□□□ 1.21
COL16A1-205ENST00000458715 HDGFL2Q7Z4V5 671 aaPredicted RBP22.59■■□□□ 1.21
COL16A1-205ENST00000458715 THRAP3Q9Y2W1 955 aaKnown RBP22.59■■□□□ 1.21
COL16A1-205ENST00000458715 NRKQ7Z2Y5 1582 aa22.59■■□□□ 1.21
COL16A1-205ENST00000458715 CLSPNQ9HAW4 1339 aa22.58■■□□□ 1.21
COL16A1-205ENST00000458715 TCP11L2Q8N4U5 519 aa22.58■■□□□ 1.21
COL16A1-205ENST00000458715 TMC1Q8TDI8 760 aa22.58■■□□□ 1.21
COL16A1-205ENST00000458715 AATKQ6ZMQ8 1374 aa22.58■■□□□ 1.21
COL16A1-205ENST00000458715 TERF2IPQ9NYB0 399 aa22.57■■□□□ 1.2
COL16A1-205ENST00000458715 LARP1Q6PKG0 1096 aaKnown RBP22.56■■□□□ 1.2
COL16A1-205ENST00000458715 USP35Q9P2H5 1018 aa22.56■■□□□ 1.2
COL16A1-205ENST00000458715 BRWD3Q6RI45 1802 aa22.56■■□□□ 1.2
COL16A1-205ENST00000458715 CAMTA1Q9Y6Y1 1673 aa22.55■■□□□ 1.2
COL16A1-205ENST00000458715 EP400Q96L91 3159 aa22.55■■□□□ 1.2
COL16A1-205ENST00000458715 SLIT3O75094 1523 aa22.54■■□□□ 1.2
COL16A1-205ENST00000458715 ST20-MTHFSA0A0A6YYL1 179 aa22.54■■□□□ 1.2
COL16A1-205ENST00000458715 ZBTB7CA1YPR0 619 aa22.54■■□□□ 1.2
COL16A1-205ENST00000458715 BAG6P46379 1132 aa22.54■■□□□ 1.2
COL16A1-205ENST00000458715 PDE3BQ13370 1112 aa22.54■■□□□ 1.2
COL16A1-205ENST00000458715 FAM196AQ6ZSG2 479 aa22.54■■□□□ 1.2
COL16A1-205ENST00000458715 NINLQ9Y2I6 1382 aa22.52■■□□□ 1.2
COL16A1-205ENST00000458715 C11orf95C9JLR9 678 aaPredicted RBP22.52■■□□□ 1.2
COL16A1-205ENST00000458715 ARHGEF25Q86VW2 580 aa22.52■■□□□ 1.2
COL16A1-205ENST00000458715 SLC12A5Q9H2X9 1139 aa22.52■■□□□ 1.2
COL16A1-205ENST00000458715 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.51■■□□□ 1.19
COL16A1-205ENST00000458715 TESK2Q96S53 571 aa22.51■■□□□ 1.19
COL16A1-205ENST00000458715 COL5A2P05997 1499 aaPredicted RBP22.51■■□□□ 1.19
COL16A1-205ENST00000458715 LMO7Q8WWI1 1683 aa22.51■■□□□ 1.19
COL16A1-205ENST00000458715 THSD7AQ9UPZ6 1657 aa22.5■■□□□ 1.19
COL16A1-205ENST00000458715 DEFB132Q7Z7B7 95 aa22.5■■□□□ 1.19
COL16A1-205ENST00000458715 USP31Q70CQ4 1352 aa22.5■■□□□ 1.19
COL16A1-205ENST00000458715 CRB1P82279 1406 aa22.49■■□□□ 1.19
COL16A1-205ENST00000458715 PCGF6Q9BYE7 350 aa22.49■■□□□ 1.19
COL16A1-205ENST00000458715 PIK3C2AO00443 1686 aa22.49■■□□□ 1.19
COL16A1-205ENST00000458715 AKAP12Q02952 1782 aa22.48■■□□□ 1.19
COL16A1-205ENST00000458715 TOM1L2Q6ZVM7 507 aa22.48■■□□□ 1.19
COL16A1-205ENST00000458715 TMF1P82094 1093 aa22.47■■□□□ 1.19
COL16A1-205ENST00000458715 CDCA8Q53HL2 280 aa22.47■■□□□ 1.19
COL16A1-205ENST00000458715 CDCA7Q9BWT1 371 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms