RNA–Protein interactions for RNA: ENST00000458657.6

C1orf228-218, Transcript of Uncharacterized protein C1orf228, human

APPRIS P2 TSL 5 BASIC

Gene C1orf228, Length 1,818 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf228-218	ENST00000458657	SSH2	Q76I76	1423 aa		19.6	■□□□□ 0.73
C1orf228-218	ENST00000458657	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	19.6	■□□□□ 0.73
C1orf228-218	ENST00000458657	SENP3-EIF4A1	A0A087X0R7	540 aa		19.59	■□□□□ 0.73
C1orf228-218	ENST00000458657	C19orf44	Q9H6X5	657 aa		19.59	■□□□□ 0.73
C1orf228-218	ENST00000458657	PHF8	Q9UPP1	1060 aa		19.59	■□□□□ 0.73
C1orf228-218	ENST00000458657	WDR43	Q15061	677 aa	Known RBP eCLIP	19.58	■□□□□ 0.73
C1orf228-218	ENST00000458657	ESCO1	Q5FWF5	840 aa		19.58	■□□□□ 0.72
C1orf228-218	ENST00000458657	NCOA3	Q9Y6Q9	1424 aa		19.57	■□□□□ 0.72
C1orf228-218	ENST00000458657	COG3	Q96JB2	828 aa		19.57	■□□□□ 0.72
C1orf228-218	ENST00000458657	ADAMTS8	Q9UP79	889 aa		19.57	■□□□□ 0.72
C1orf228-218	ENST00000458657	MAP2	P11137	1827 aa	Known RBP	19.56	■□□□□ 0.72
C1orf228-218	ENST00000458657	PIK3C2A	O00443	1686 aa		19.56	■□□□□ 0.72
C1orf228-218	ENST00000458657	BLM	P54132	1417 aa	Predicted RBP	19.56	■□□□□ 0.72
C1orf228-218	ENST00000458657	FBLN1	P23142	703 aa		19.55	■□□□□ 0.72
C1orf228-218	ENST00000458657	LRRC7	Q96NW7	1537 aa		19.55	■□□□□ 0.72
C1orf228-218	ENST00000458657	C1orf167	Q5SNV9	1468 aa		19.55	■□□□□ 0.72
C1orf228-218	ENST00000458657	ORAI2	Q96SN7	254 aa		19.55	■□□□□ 0.72
C1orf228-218	ENST00000458657	DCC	P43146	1447 aa		19.55	■□□□□ 0.72
C1orf228-218	ENST00000458657	ZBED9	Q6R2W3	1325 aa		19.54	■□□□□ 0.72
C1orf228-218	ENST00000458657	TTC21A	Q8NDW8	1320 aa		19.54	■□□□□ 0.72
C1orf228-218	ENST00000458657	ATF3	P18847	181 aa		19.54	■□□□□ 0.72
C1orf228-218	ENST00000458657	CFAP53	Q96M91	514 aa		19.54	■□□□□ 0.72
C1orf228-218	ENST00000458657	OVOS2	A0A0J9YW53	1432 aa		19.54	■□□□□ 0.72
C1orf228-218	ENST00000458657	OVOS2	Q6IE36	1432 aa		19.54	■□□□□ 0.72
C1orf228-218	ENST00000458657	SCAF1	Q9H7N4	1312 aa	Known RBP	19.53	■□□□□ 0.72
C1orf228-218	ENST00000458657	MST1R	Q04912	1400 aa		19.53	■□□□□ 0.72
C1orf228-218	ENST00000458657	INSR	P06213	1382 aa		19.53	■□□□□ 0.72
C1orf228-218	ENST00000458657	MSH6	P52701	1360 aa		19.53	■□□□□ 0.72
C1orf228-218	ENST00000458657	KIF1A	Q12756	1690 aa		19.52	■□□□□ 0.72
C1orf228-218	ENST00000458657	DMRT2	Q9Y5R5	561 aa		19.52	■□□□□ 0.72
C1orf228-218	ENST00000458657	COL3A1	P02461	1466 aa	Predicted RBP	19.52	■□□□□ 0.72
C1orf228-218	ENST00000458657	MARF1	Q9Y4F3	1742 aa	Known RBP	19.5	■□□□□ 0.71
C1orf228-218	ENST00000458657	PAK3	O75914	559 aa	Predicted RBP	19.5	■□□□□ 0.71
C1orf228-218	ENST00000458657	POLK	Q9UBT6	870 aa		19.5	■□□□□ 0.71
C1orf228-218	ENST00000458657	AATK	Q6ZMQ8	1374 aa		19.49	■□□□□ 0.71
C1orf228-218	ENST00000458657	PPM1G	O15355	546 aa	Predicted RBP	19.49	■□□□□ 0.71
C1orf228-218	ENST00000458657	PSME1	Q06323	249 aa		19.48	■□□□□ 0.71
C1orf228-218	ENST00000458657	CADPS2	Q86UW7	1296 aa		19.48	■□□□□ 0.71
C1orf228-218	ENST00000458657	EMILIN1	Q9Y6C2	1016 aa		19.48	■□□□□ 0.71
C1orf228-218	ENST00000458657	SMG6	Q86US8	1419 aa	Known RBP	19.48	■□□□□ 0.71
C1orf228-218	ENST00000458657	USP54	Q70EL1	1684 aa		19.48	■□□□□ 0.71
C1orf228-218	ENST00000458657	FOXO3	O43524	673 aa		19.48	■□□□□ 0.71
C1orf228-218	ENST00000458657	USP31	Q70CQ4	1352 aa		19.47	■□□□□ 0.71
C1orf228-218	ENST00000458657	RRS1	Q15050	365 aa	Known RBP	19.47	■□□□□ 0.71
C1orf228-218	ENST00000458657	CCDC146	Q8IYE0	955 aa		19.47	■□□□□ 0.71
C1orf228-218	ENST00000458657	SOX12	O15370	315 aa		19.46	■□□□□ 0.71
C1orf228-218	ENST00000458657	XPC	Q01831	940 aa	Predicted RBP	19.46	■□□□□ 0.71
C1orf228-218	ENST00000458657	NUTM2G	Q5VZR2	741 aa		19.46	■□□□□ 0.71
C1orf228-218	ENST00000458657	AEBP2	Q6ZN18	517 aa	Predicted RBP	19.46	■□□□□ 0.71
C1orf228-218	ENST00000458657	SALL2	Q9Y467	1007 aa	Predicted RBP	19.46	■□□□□ 0.71
C1orf228-218	ENST00000458657	PNPLA6	Q8IY17	1366 aa		19.46	■□□□□ 0.71
C1orf228-218	ENST00000458657	CDK12	Q9NYV4	1490 aa	Predicted RBP	19.46	■□□□□ 0.71
C1orf228-218	ENST00000458657	ABTB2	Q8N961	1025 aa		19.46	■□□□□ 0.71
C1orf228-218	ENST00000458657	TRPM3	Q9HCF6	1732 aa	Predicted RBP	19.45	■□□□□ 0.7
C1orf228-218	ENST00000458657	NLRP6	P59044	892 aa		19.45	■□□□□ 0.7
C1orf228-218	ENST00000458657	PEAK1	Q9H792	1746 aa		19.43	■□□□□ 0.7
C1orf228-218	ENST00000458657	DIAPH1	O60610	1272 aa	Known RBP	19.42	■□□□□ 0.7
C1orf228-218	ENST00000458657	U2SURP	O15042	1029 aa	Known RBP	19.41	■□□□□ 0.7
C1orf228-218	ENST00000458657	U2AF1L5	P0DN76	240 aa	Predicted RBP	19.41	■□□□□ 0.7
C1orf228-218	ENST00000458657	U2AF1	Q01081	240 aa	Known RBP eCLIP	19.41	■□□□□ 0.7
C1orf228-218	ENST00000458657	NUDC	Q9Y266	331 aa		19.41	■□□□□ 0.7
C1orf228-218	ENST00000458657	KRT28	Q7Z3Y7	464 aa		19.4	■□□□□ 0.7
C1orf228-218	ENST00000458657	DDX17	Q92841	729 aa	Known RBP	19.39	■□□□□ 0.7
C1orf228-218	ENST00000458657	APAF1	O14727	1248 aa		19.38	■□□□□ 0.69
C1orf228-218	ENST00000458657	MAP3K19	Q56UN5	1328 aa		19.37	■□□□□ 0.69
C1orf228-218	ENST00000458657	ALS2	Q96Q42	1657 aa		19.37	■□□□□ 0.69
C1orf228-218	ENST00000458657	LTN1	O94822	1766 aa		19.37	■□□□□ 0.69
C1orf228-218	ENST00000458657	IQSEC2	Q5JU85	1478 aa		19.36	■□□□□ 0.69
C1orf228-218	ENST00000458657	LMOD2	Q6P5Q4	547 aa		19.36	■□□□□ 0.69
C1orf228-218	ENST00000458657	RUNDC1	Q96C34	613 aa		19.36	■□□□□ 0.69
C1orf228-218	ENST00000458657	BRINP3	Q76B58	766 aa		19.35	■□□□□ 0.69
C1orf228-218	ENST00000458657	SLAIN2	Q9P270	581 aa		19.35	■□□□□ 0.69
C1orf228-218	ENST00000458657	LTBP4	Q8N2S1	1624 aa		19.35	■□□□□ 0.69
C1orf228-218	ENST00000458657	NPHP3	Q7Z494	1330 aa		19.35	■□□□□ 0.69
C1orf228-218	ENST00000458657	NFAT5	O94916	1531 aa		19.35	■□□□□ 0.69
C1orf228-218	ENST00000458657	IL13	P35225	146 aa		19.35	■□□□□ 0.69
C1orf228-218	ENST00000458657	PXDN	Q92626	1479 aa		19.34	■□□□□ 0.69
C1orf228-218	ENST00000458657	PLEKHG5	O94827	1062 aa		19.34	■□□□□ 0.69
C1orf228-218	ENST00000458657	GTF3C3	Q9Y5Q9	886 aa		19.34	■□□□□ 0.69
C1orf228-218	ENST00000458657	SBNO1	A3KN83	1393 aa		19.34	■□□□□ 0.69
C1orf228-218	ENST00000458657	HSP90AB2P	Q58FF8	381 aa		19.33	■□□□□ 0.69
C1orf228-218	ENST00000458657	FLT4	P35916	1363 aa		19.33	■□□□□ 0.69
C1orf228-218	ENST00000458657	SLIT3	O75094	1523 aa		19.32	■□□□□ 0.68
C1orf228-218	ENST00000458657	AMPH	P49418	695 aa		19.32	■□□□□ 0.68
C1orf228-218	ENST00000458657	EIF4A2	Q14240	407 aa	Known RBP	19.31	■□□□□ 0.68
C1orf228-218	ENST00000458657	TCP11L2	Q8N4U5	519 aa		19.31	■□□□□ 0.68
C1orf228-218	ENST00000458657	RRP7A	Q9Y3A4	280 aa	Known RBP	19.31	■□□□□ 0.68
C1orf228-218	ENST00000458657	CDCA7L	Q96GN5	454 aa		19.3	■□□□□ 0.68
C1orf228-218	ENST00000458657	PLEKHF1	Q96S99	279 aa		19.3	■□□□□ 0.68
C1orf228-218	ENST00000458657	TNS3	Q68CZ2	1445 aa		19.3	■□□□□ 0.68
C1orf228-218	ENST00000458657	HMOX1	P09601	288 aa		19.3	■□□□□ 0.68
C1orf228-218	ENST00000458657	NEUROD2	Q15784	382 aa		19.3	■□□□□ 0.68
C1orf228-218	ENST00000458657	ZNF521	Q96K83	1311 aa		19.29	■□□□□ 0.68
C1orf228-218	ENST00000458657	RGPD1	P0DJD0	1748 aa		19.29	■□□□□ 0.68
C1orf228-218	ENST00000458657	PDE3B	Q13370	1112 aa		19.29	■□□□□ 0.68
C1orf228-218	ENST00000458657	USP19	O94966	1318 aa		19.29	■□□□□ 0.68
C1orf228-218	ENST00000458657	MED1	Q15648	1581 aa	Predicted RBP	19.29	■□□□□ 0.68
C1orf228-218	ENST00000458657	KCNH5	Q8NCM2	988 aa		19.28	■□□□□ 0.68
C1orf228-218	ENST00000458657	RSPH6A	Q9H0K4	717 aa		19.28	■□□□□ 0.68
C1orf228-218	ENST00000458657	MAPK8IP3	Q9UPT6	1336 aa		19.28	■□□□□ 0.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms