RNA–Protein interactions for RNA: ENST00000458616.1

NELFA-211, Transcript of negative elongation factor complex member A, humanhuman

TSL 3

Gene NELFA, Length 792 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-211ENST00000458616 PAK3O75914 559 aaPredicted RBP24.35■■□□□ 1.49
NELFA-211ENST00000458616 ZRANB1Q9UGI0 708 aa24.34■■□□□ 1.49
NELFA-211ENST00000458616 BLMP54132 1417 aaPredicted RBP24.33■■□□□ 1.49
NELFA-211ENST00000458616 KRT27Q7Z3Y8 459 aa24.32■■□□□ 1.48
NELFA-211ENST00000458616 DEFB132Q7Z7B7 95 aa24.32■■□□□ 1.48
NELFA-211ENST00000458616 FAM98CQ17RN3 349 aaKnown RBP24.31■■□□□ 1.48
NELFA-211ENST00000458616 NRAPQ86VF7 1730 aa24.3■■□□□ 1.48
NELFA-211ENST00000458616 NBPF8Q3BBV2 869 aa24.3■■□□□ 1.48
NELFA-211ENST00000458616 PLEKHG3A1L390 1219 aa24.29■■□□□ 1.48
NELFA-211ENST00000458616 CCDC61Q9Y6R9 512 aa24.29■■□□□ 1.48
NELFA-211ENST00000458616 CRYBG1Q9Y4K1 1723 aa24.29■■□□□ 1.48
NELFA-211ENST00000458616 ACEP12821 1306 aa24.29■■□□□ 1.48
NELFA-211ENST00000458616 POLR3AO14802 1390 aaPredicted RBP24.29■■□□□ 1.48
NELFA-211ENST00000458616 COL14A1Q05707 1796 aaKnown RBP24.28■■□□□ 1.48
NELFA-211ENST00000458616 SPATA31A5Q5VU36 1347 aa24.28■■□□□ 1.48
NELFA-211ENST00000458616 SPATA31A7Q8IWB4 1347 aa24.28■■□□□ 1.48
NELFA-211ENST00000458616 KIAA1210Q9ULL0 1709 aa24.27■■□□□ 1.48
NELFA-211ENST00000458616 NUTM2GQ5VZR2 741 aa24.26■■□□□ 1.47
NELFA-211ENST00000458616 PRDM11Q9NQV5 511 aa24.26■■□□□ 1.47
NELFA-211ENST00000458616 KIAA0232Q92628 1395 aa24.25■■□□□ 1.47
NELFA-211ENST00000458616 CHRNA2Q15822 529 aa24.24■■□□□ 1.47
NELFA-211ENST00000458616 ITSN1Q15811 1721 aa24.23■■□□□ 1.47
NELFA-211ENST00000458616 A0A0G2JS52 829 aa24.22■■□□□ 1.47
NELFA-211ENST00000458616 ZC3H6P61129 1189 aaKnown RBP24.22■■□□□ 1.47
NELFA-211ENST00000458616 MYT1Q01538 1121 aa24.22■■□□□ 1.47
NELFA-211ENST00000458616 L3MBTL2Q969R5 705 aa24.22■■□□□ 1.47
NELFA-211ENST00000458616 TOPAZ1Q8N9V7 1692 aa24.21■■□□□ 1.47
NELFA-211ENST00000458616 FAM182BQ5T319 152 aa24.21■■□□□ 1.47
NELFA-211ENST00000458616 SF3B2Q13435 895 aaKnown RBP24.2■■□□□ 1.46
NELFA-211ENST00000458616 CABP2Q9NPB3 220 aa24.2■■□□□ 1.46
NELFA-211ENST00000458616 SPATA31A1Q5TZJ5 1347 aa24.19■■□□□ 1.46
NELFA-211ENST00000458616 CENPJQ9HC77 1338 aaPredicted RBP24.19■■□□□ 1.46
NELFA-211ENST00000458616 SIN3AQ96ST3 1273 aa24.19■■□□□ 1.46
NELFA-211ENST00000458616 SRPK2P78362 688 aaKnown RBP24.17■■□□□ 1.46
NELFA-211ENST00000458616 ABTB2Q8N961 1025 aa24.17■■□□□ 1.46
NELFA-211ENST00000458616 STRN4Q9NRL3 753 aa24.16■■□□□ 1.46
NELFA-211ENST00000458616 PHRF1Q9P1Y6 1649 aaKnown RBP24.16■■□□□ 1.46
NELFA-211ENST00000458616 THSD7AQ9UPZ6 1657 aa24.15■■□□□ 1.46
NELFA-211ENST00000458616 USP19O94966 1318 aa24.14■■□□□ 1.46
NELFA-211ENST00000458616 PPIP5K1Q6PFW1 1433 aa24.14■■□□□ 1.45
NELFA-211ENST00000458616 CABP1Q9NZU7 370 aa24.13■■□□□ 1.45
NELFA-211ENST00000458616 CAMTA1Q9Y6Y1 1673 aa24.11■■□□□ 1.45
NELFA-211ENST00000458616 GCP02774 474 aa24.11■■□□□ 1.45
NELFA-211ENST00000458616 BAG6P46379 1132 aa24.11■■□□□ 1.45
NELFA-211ENST00000458616 CPDO75976 1380 aa24.11■■□□□ 1.45
NELFA-211ENST00000458616 EN1Q05925 392 aaPredicted RBP24.1■■□□□ 1.45
NELFA-211ENST00000458616 LARP1Q6PKG0 1096 aaKnown RBP24.1■■□□□ 1.45
NELFA-211ENST00000458616 NLRP13Q86W25 1043 aa24.1■■□□□ 1.45
NELFA-211ENST00000458616 NRKQ7Z2Y5 1582 aa24.09■■□□□ 1.45
NELFA-211ENST00000458616 EVA1CP58658 441 aa24.09■■□□□ 1.45
NELFA-211ENST00000458616 USP35Q9P2H5 1018 aa24.09■■□□□ 1.45
NELFA-211ENST00000458616 SSH2Q76I76 1423 aa24.09■■□□□ 1.45
NELFA-211ENST00000458616 NEUROD1Q13562 356 aa24.08■■□□□ 1.45
NELFA-211ENST00000458616 BARGINQ6ZT62 677 aa24.08■■□□□ 1.45
NELFA-211ENST00000458616 QRICH2Q9H0J4 1663 aa24.06■■□□□ 1.44
NELFA-211ENST00000458616 LMO7Q8WWI1 1683 aa24.05■■□□□ 1.44
NELFA-211ENST00000458616 BRD4O60885 1362 aaPredicted RBP24.05■■□□□ 1.44
NELFA-211ENST00000458616 USP6P35125 1406 aa24.05■■□□□ 1.44
NELFA-211ENST00000458616 PSDA5PKW4 1024 aaPredicted RBP24.05■■□□□ 1.44
NELFA-211ENST00000458616 FAM196AQ6ZSG2 479 aa24.04■■□□□ 1.44
NELFA-211ENST00000458616 TRIM37O94972 964 aa24.03■■□□□ 1.44
NELFA-211ENST00000458616 NLRP6P59044 892 aa24.03■■□□□ 1.44
NELFA-211ENST00000458616 TCP11L2Q8N4U5 519 aa24.03■■□□□ 1.44
NELFA-211ENST00000458616 EVC2Q86UK5 1308 aa24.03■■□□□ 1.44
NELFA-211ENST00000458616 DISP2A7MBM2 1401 aa24.02■■□□□ 1.44
NELFA-211ENST00000458616 EZH2Q15910 746 aaKnown RBP24.02■■□□□ 1.44
NELFA-211ENST00000458616 TRPM1Q7Z4N2 1603 aa24.02■■□□□ 1.44
NELFA-211ENST00000458616 CAMKK2Q96RR4 588 aa24.01■■□□□ 1.43
NELFA-211ENST00000458616 RGPD1P0DJD0 1748 aa24.01■■□□□ 1.43
NELFA-211ENST00000458616 ROCK2O75116 1388 aaKnown RBP23.99■■□□□ 1.43
NELFA-211ENST00000458616 COL5A2P05997 1499 aaPredicted RBP23.99■■□□□ 1.43
NELFA-211ENST00000458616 TNS1Q9HBL0 1735 aaKnown RBP23.98■■□□□ 1.43
NELFA-211ENST00000458616 PDE3BQ13370 1112 aa23.98■■□□□ 1.43
NELFA-211ENST00000458616 THRAP3Q9Y2W1 955 aaKnown RBP23.98■■□□□ 1.43
NELFA-211ENST00000458616 AATKQ6ZMQ8 1374 aa23.97■■□□□ 1.43
NELFA-211ENST00000458616 AXIN2Q9Y2T1 843 aa23.97■■□□□ 1.43
NELFA-211ENST00000458616 SLIT3O75094 1523 aa23.96■■□□□ 1.43
NELFA-211ENST00000458616 TTC21BQ7Z4L5 1316 aa23.96■■□□□ 1.43
NELFA-211ENST00000458616 APBA3O96018 575 aa23.96■■□□□ 1.43
NELFA-211ENST00000458616 ZBTB7CA1YPR0 619 aa23.95■■□□□ 1.42
NELFA-211ENST00000458616 R3HDM1Q15032 1099 aaKnown RBP23.95■■□□□ 1.42
NELFA-211ENST00000458616 ZNF692Q9BU19 519 aaPredicted RBP23.95■■□□□ 1.42
NELFA-211ENST00000458616 PIK3C2AO00443 1686 aa23.93■■□□□ 1.42
NELFA-211ENST00000458616 CRB1P82279 1406 aa23.93■■□□□ 1.42
NELFA-211ENST00000458616 ARHGEF25Q86VW2 580 aa23.92■■□□□ 1.42
NELFA-211ENST00000458616 CPSF1Q10570 1443 aaKnown RBP23.92■■□□□ 1.42
NELFA-211ENST00000458616 LRP5O75197 1615 aa23.92■■□□□ 1.42
NELFA-211ENST00000458616 COL18A1P39060 1754 aa23.91■■□□□ 1.42
NELFA-211ENST00000458616 TTC21AQ8NDW8 1320 aa23.87■■□□□ 1.41
NELFA-211ENST00000458616 TOM1L2Q6ZVM7 507 aa23.86■■□□□ 1.41
NELFA-211ENST00000458616 KCNH5Q8NCM2 988 aa23.86■■□□□ 1.41
NELFA-211ENST00000458616 PARP4Q9UKK3 1724 aaKnown RBP23.86■■□□□ 1.41
NELFA-211ENST00000458616 PARD3Q8TEW0 1356 aa23.86■■□□□ 1.41
NELFA-211ENST00000458616 AKAP12Q02952 1782 aa23.86■■□□□ 1.41
NELFA-211ENST00000458616 WDR17Q8IZU2 1322 aa23.85■■□□□ 1.41
NELFA-211ENST00000458616 SOX12O15370 315 aa23.85■■□□□ 1.41
NELFA-211ENST00000458616 CARD11Q9BXL7 1154 aa23.85■■□□□ 1.41
NELFA-211ENST00000458616 KTN1Q86UP2 1357 aaKnown RBP23.85■■□□□ 1.41
NELFA-211ENST00000458616 SBNO2Q9Y2G9 1366 aa23.85■■□□□ 1.41
NELFA-211ENST00000458616 PTF1AQ7RTS3 328 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms