RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 COL22A1Q8NFW1 1626 aaPredicted RBP12.37□□□□□ -0.43
VPS50-207ENST00000458530 KIF7Q2M1P5 1343 aa12.37□□□□□ -0.43
VPS50-207ENST00000458530 ADGRB1O14514 1584 aa12.36□□□□□ -0.43
VPS50-207ENST00000458530 CDCA8Q53HL2 280 aa12.36□□□□□ -0.43
VPS50-207ENST00000458530 CCDC125Q86Z20 511 aa12.36□□□□□ -0.43
VPS50-207ENST00000458530 C14orf93Q9H972 538 aaKnown RBP12.36□□□□□ -0.43
VPS50-207ENST00000458530 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
VPS50-207ENST00000458530 HAX1O00165 279 aa12.35□□□□□ -0.43
VPS50-207ENST00000458530 ANP32CO43423 234 aa12.35□□□□□ -0.43
VPS50-207ENST00000458530 TMF1P82094 1093 aa12.35□□□□□ -0.43
VPS50-207ENST00000458530 TRPC5Q9UL62 973 aaPredicted RBP12.35□□□□□ -0.43
VPS50-207ENST00000458530 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
VPS50-207ENST00000458530 CFAP70Q5T0N1 1121 aa12.34□□□□□ -0.43
VPS50-207ENST00000458530 USP21Q9UK80 565 aa12.34□□□□□ -0.43
VPS50-207ENST00000458530 SBNO2Q9Y2G9 1366 aa12.33□□□□□ -0.44
VPS50-207ENST00000458530 ADAMTS2O95450 1211 aa12.33□□□□□ -0.44
VPS50-207ENST00000458530 MIER1Q8N108 512 aa12.33□□□□□ -0.44
VPS50-207ENST00000458530 KNDC1Q76NI1 1749 aa12.32□□□□□ -0.44
VPS50-207ENST00000458530 EVX2Q03828 476 aa12.3□□□□□ -0.44
VPS50-207ENST00000458530 ORAI2Q96SN7 254 aa12.3□□□□□ -0.44
VPS50-207ENST00000458530 ROBO2Q9HCK4 1378 aa12.3□□□□□ -0.44
VPS50-207ENST00000458530 LRP5O75197 1615 aa12.29□□□□□ -0.44
VPS50-207ENST00000458530 DLC1Q96QB1 1528 aa12.29□□□□□ -0.44
VPS50-207ENST00000458530 C11orf95C9JLR9 678 aaPredicted RBP12.29□□□□□ -0.44
VPS50-207ENST00000458530 TESK2Q96S53 571 aa12.29□□□□□ -0.44
VPS50-207ENST00000458530 POLR3GLQ9BT43 218 aa12.29□□□□□ -0.44
VPS50-207ENST00000458530 CENPJQ9HC77 1338 aaPredicted RBP12.29□□□□□ -0.44
VPS50-207ENST00000458530 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.28□□□□□ -0.44
VPS50-207ENST00000458530 PXDNQ92626 1479 aa12.28□□□□□ -0.44
VPS50-207ENST00000458530 MYOM1P52179 1685 aa12.28□□□□□ -0.44
VPS50-207ENST00000458530 BLMP54132 1417 aaPredicted RBP12.28□□□□□ -0.44
VPS50-207ENST00000458530 CCER2I3L3R5 266 aa12.27□□□□□ -0.45
VPS50-207ENST00000458530 GJD4Q96KN9 370 aaPredicted RBP12.27□□□□□ -0.45
VPS50-207ENST00000458530 YTHDC2Q9H6S0 1430 aaKnown RBP12.27□□□□□ -0.45
VPS50-207ENST00000458530 SLIT2O94813 1529 aa12.27□□□□□ -0.45
VPS50-207ENST00000458530 GLI3P10071 1580 aa12.26□□□□□ -0.45
VPS50-207ENST00000458530 MARF1Q9Y4F3 1742 aaKnown RBP12.26□□□□□ -0.45
VPS50-207ENST00000458530 KTN1Q86UP2 1357 aaKnown RBP12.26□□□□□ -0.45
VPS50-207ENST00000458530 CDC42BPGQ6DT37 1551 aa12.25□□□□□ -0.45
VPS50-207ENST00000458530 LRPPRCP42704 1394 aaKnown RBP12.24□□□□□ -0.45
VPS50-207ENST00000458530 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
VPS50-207ENST00000458530 TRAK1Q9UPV9 953 aa12.24□□□□□ -0.45
VPS50-207ENST00000458530 NPHP3Q7Z494 1330 aa12.23□□□□□ -0.45
VPS50-207ENST00000458530 EVC2Q86UK5 1308 aa12.22□□□□□ -0.45
VPS50-207ENST00000458530 TMEM132EQ6IEE7 984 aa12.22□□□□□ -0.45
VPS50-207ENST00000458530 PUS7Q96PZ0 661 aaKnown RBP12.22□□□□□ -0.45
VPS50-207ENST00000458530 ABCC11Q96J66 1382 aa12.21□□□□□ -0.45
VPS50-207ENST00000458530 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.45
VPS50-207ENST00000458530 UNC5CLQ8IV45 518 aa12.21□□□□□ -0.45
VPS50-207ENST00000458530 TECPR2O15040 1411 aa12.2□□□□□ -0.46
VPS50-207ENST00000458530 NINLQ9Y2I6 1382 aa12.2□□□□□ -0.46
VPS50-207ENST00000458530 CENPBP07199 599 aaPredicted RBP12.2□□□□□ -0.46
VPS50-207ENST00000458530 POGKQ9P215 609 aa12.2□□□□□ -0.46
VPS50-207ENST00000458530 BRWD3Q6RI45 1802 aa12.19□□□□□ -0.46
VPS50-207ENST00000458530 DEFB132Q7Z7B7 95 aa12.19□□□□□ -0.46
VPS50-207ENST00000458530 PROM2Q8N271 834 aa12.19□□□□□ -0.46
VPS50-207ENST00000458530 PRKRIP1Q9H875 184 aaPredicted RBP12.19□□□□□ -0.46
VPS50-207ENST00000458530 TULP4Q9NRJ4 1543 aa12.19□□□□□ -0.46
VPS50-207ENST00000458530 SIRT1Q96EB6 747 aa12.18□□□□□ -0.46
VPS50-207ENST00000458530 CREBZFQ9NS37 354 aa12.18□□□□□ -0.46
VPS50-207ENST00000458530 STK26Q9P289 416 aa12.18□□□□□ -0.46
VPS50-207ENST00000458530 USP32Q8NFA0 1604 aa12.18□□□□□ -0.46
VPS50-207ENST00000458530 SPATA31A3Q5VYP0 1347 aa12.17□□□□□ -0.46
VPS50-207ENST00000458530 FOXO3O43524 673 aa12.17□□□□□ -0.46
VPS50-207ENST00000458530 RALBP1Q15311 655 aa12.17□□□□□ -0.46
VPS50-207ENST00000458530 FARP1Q9Y4F1 1045 aaPredicted RBP12.17□□□□□ -0.46
VPS50-207ENST00000458530 ADGRB2O60241 1585 aa12.17□□□□□ -0.46
VPS50-207ENST00000458530 FKBP8Q14318 412 aa12.16□□□□□ -0.46
VPS50-207ENST00000458530 VPS72Q15906 364 aa12.16□□□□□ -0.46
VPS50-207ENST00000458530 ESCO1Q5FWF5 840 aa12.16□□□□□ -0.46
VPS50-207ENST00000458530 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
VPS50-207ENST00000458530 SEPT12Q8IYM1 358 aa12.15□□□□□ -0.46
VPS50-207ENST00000458530 PRAM1Q96QH2 718 aa12.15□□□□□ -0.46
VPS50-207ENST00000458530 KNSTRNQ9Y448 316 aa12.15□□□□□ -0.46
VPS50-207ENST00000458530 NPC1L1Q9UHC9 1359 aa12.15□□□□□ -0.46
VPS50-207ENST00000458530 XPCQ01831 940 aaPredicted RBP12.14□□□□□ -0.47
VPS50-207ENST00000458530 PANK3Q9H999 370 aa12.14□□□□□ -0.47
VPS50-207ENST00000458530 ITSN1Q15811 1721 aa12.14□□□□□ -0.47
VPS50-207ENST00000458530 NWD2Q9ULI1 1742 aa12.14□□□□□ -0.47
VPS50-207ENST00000458530 MYBBP1AQ9BQG0 1328 aaKnown RBP12.12□□□□□ -0.47
VPS50-207ENST00000458530 DISP2A7MBM2 1401 aa12.12□□□□□ -0.47
VPS50-207ENST00000458530 PARD3Q8TEW0 1356 aa12.12□□□□□ -0.47
VPS50-207ENST00000458530 KIF1AQ12756 1690 aa12.12□□□□□ -0.47
VPS50-207ENST00000458530 FMN2Q9NZ56 1722 aa12.11□□□□□ -0.47
VPS50-207ENST00000458530 ANKRD26Q9UPS8 1709 aa12.11□□□□□ -0.47
VPS50-207ENST00000458530 PLCH1Q4KWH8 1693 aa12.11□□□□□ -0.47
VPS50-207ENST00000458530 SRPK2P78362 688 aaKnown RBP12.11□□□□□ -0.47
VPS50-207ENST00000458530 KRT27Q7Z3Y8 459 aa12.11□□□□□ -0.47
VPS50-207ENST00000458530 KIF20BQ96Q89 1820 aa12.11□□□□□ -0.47
VPS50-207ENST00000458530 TNS3Q68CZ2 1445 aa12.11□□□□□ -0.47
VPS50-207ENST00000458530 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
VPS50-207ENST00000458530 BRD4O60885 1362 aaPredicted RBP12.1□□□□□ -0.47
VPS50-207ENST00000458530 ANKRD36BQ8N2N9 1353 aa12.1□□□□□ -0.47
VPS50-207ENST00000458530 PER1O15534 1290 aaPredicted RBP12.1□□□□□ -0.47
VPS50-207ENST00000458530 SF3B2Q13435 895 aaKnown RBP12.1□□□□□ -0.47
VPS50-207ENST00000458530 SAFB2Q14151 953 aaKnown RBP eCLIP12.1□□□□□ -0.47
VPS50-207ENST00000458530 YTHDC1Q96MU7 727 aaKnown RBP12.1□□□□□ -0.47
VPS50-207ENST00000458530 ABCA3Q99758 1704 aa12.1□□□□□ -0.47
VPS50-207ENST00000458530 ATP7BP35670 1465 aa12.09□□□□□ -0.47
VPS50-207ENST00000458530 NSD2O96028 1365 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms