RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 UBAP1LF5GYI3 381 aa20.23■□□□□ 0.83
LSS-205ENST00000457828 ADAMTS2O95450 1211 aa20.23■□□□□ 0.83
LSS-205ENST00000457828 FAM43AQ8N2R8 423 aa20.23■□□□□ 0.83
LSS-205ENST00000457828 TESK2Q96S53 571 aa20.23■□□□□ 0.83
LSS-205ENST00000457828 ZFYVE16Q7Z3T8 1539 aa20.23■□□□□ 0.83
LSS-205ENST00000457828 TRAK2O60296 914 aa20.23■□□□□ 0.83
LSS-205ENST00000457828 KCNA6P17658 529 aa20.23■□□□□ 0.83
LSS-205ENST00000457828 ARID3AQ99856 593 aa20.22■□□□□ 0.83
LSS-205ENST00000457828 CHMP3Q9Y3E7 222 aa20.22■□□□□ 0.83
LSS-205ENST00000457828 NSD3Q9BZ95 1437 aa20.22■□□□□ 0.83
LSS-205ENST00000457828 PLEKHH1Q9ULM0 1364 aa20.21■□□□□ 0.83
LSS-205ENST00000457828 PLCB2Q00722 1185 aa20.21■□□□□ 0.83
LSS-205ENST00000457828 HSP90AA2PQ14568 343 aaPredicted RBP20.21■□□□□ 0.83
LSS-205ENST00000457828 KRT28Q7Z3Y7 464 aa20.2■□□□□ 0.82
LSS-205ENST00000457828 DDX49Q9Y6V7 483 aaKnown RBP20.2■□□□□ 0.82
LSS-205ENST00000457828 SCAF11Q99590 1463 aaKnown RBP20.2■□□□□ 0.82
LSS-205ENST00000457828 CFAP65Q6ZU64 1925 aaKnown RBP20.2■□□□□ 0.82
LSS-205ENST00000457828 DDX54Q8TDD1 881 aaKnown RBP20.2■□□□□ 0.82
LSS-205ENST00000457828 TTC37Q6PGP7 1564 aa20.19■□□□□ 0.82
LSS-205ENST00000457828 EXOSC9Q06265 439 aaKnown RBP20.19■□□□□ 0.82
LSS-205ENST00000457828 UHRF1BP1Q6BDS2 1440 aa20.19■□□□□ 0.82
LSS-205ENST00000457828 TSPYL4Q9UJ04 414 aa20.19■□□□□ 0.82
LSS-205ENST00000457828 ADGRL2O95490 1459 aa20.19■□□□□ 0.82
LSS-205ENST00000457828 TATP17735 454 aaPredicted RBP20.18■□□□□ 0.82
LSS-205ENST00000457828 MSH6P52701 1360 aa20.18■□□□□ 0.82
LSS-205ENST00000457828 FOXD4L5Q5VV16 416 aaPredicted RBP20.18■□□□□ 0.82
LSS-205ENST00000457828 FOXD4L4Q8WXT5 416 aaPredicted RBP20.18■□□□□ 0.82
LSS-205ENST00000457828 PLEKHO1Q53GL0 409 aaPredicted RBP20.18■□□□□ 0.82
LSS-205ENST00000457828 NKTRP30414 1462 aaKnown RBP20.17■□□□□ 0.82
LSS-205ENST00000457828 MYO5CQ9NQX4 1742 aa20.17■□□□□ 0.82
LSS-205ENST00000457828 KCNH5Q8NCM2 988 aa20.17■□□□□ 0.82
LSS-205ENST00000457828 TBX22Q9Y458 520 aa20.17■□□□□ 0.82
LSS-205ENST00000457828 AMER1Q5JTC6 1135 aaPredicted RBP20.17■□□□□ 0.82
LSS-205ENST00000457828 TOM1O60784 492 aa20.16■□□□□ 0.82
LSS-205ENST00000457828 PRAG1Q86YV5 1406 aa20.16■□□□□ 0.82
LSS-205ENST00000457828 SPINK5Q9NQ38 1064 aaPredicted RBP20.16■□□□□ 0.82
LSS-205ENST00000457828 ACEP12821 1306 aa20.16■□□□□ 0.82
LSS-205ENST00000457828 GCC2Q8IWJ2 1684 aa20.16■□□□□ 0.82
LSS-205ENST00000457828 MCM4P33991 863 aa20.15■□□□□ 0.82
LSS-205ENST00000457828 RARSP54136 660 aaKnown RBP20.15■□□□□ 0.82
LSS-205ENST00000457828 VSIG10Q8N0Z9 540 aa20.15■□□□□ 0.82
LSS-205ENST00000457828 CLASP1Q7Z460 1538 aa20.15■□□□□ 0.82
LSS-205ENST00000457828 TBC1D2Q9BYX2 928 aa20.15■□□□□ 0.82
LSS-205ENST00000457828 GAS2L2Q8NHY3 880 aa20.14■□□□□ 0.82
LSS-205ENST00000457828 AAMPQ13685 434 aa20.14■□□□□ 0.81
LSS-205ENST00000457828 SEC24BO95487 1268 aa20.14■□□□□ 0.81
LSS-205ENST00000457828 TAF7LQ5H9L4 462 aa20.14■□□□□ 0.81
LSS-205ENST00000457828 C19orf44Q9H6X5 657 aa20.14■□□□□ 0.81
LSS-205ENST00000457828 NOL8Q76FK4 1167 aaKnown RBP20.13■□□□□ 0.81
LSS-205ENST00000457828 MRE11P49959 708 aa20.13■□□□□ 0.81
LSS-205ENST00000457828 MVPQ14764 893 aaKnown RBP20.13■□□□□ 0.81
LSS-205ENST00000457828 ZNF530Q6P9A1 599 aaPredicted RBP20.13■□□□□ 0.81
LSS-205ENST00000457828 GNAI1P63096 354 aa20.13■□□□□ 0.81
LSS-205ENST00000457828 PTMSP20962 102 aa20.12■□□□□ 0.81
LSS-205ENST00000457828 NGLY1Q96IV0 654 aa20.12■□□□□ 0.81
LSS-205ENST00000457828 LTKP29376 864 aa20.11■□□□□ 0.81
LSS-205ENST00000457828 EMILIN1Q9Y6C2 1016 aa20.11■□□□□ 0.81
LSS-205ENST00000457828 NPATQ14207 1427 aa20.1■□□□□ 0.81
LSS-205ENST00000457828 SAMD9LQ8IVG5 1584 aa20.1■□□□□ 0.81
LSS-205ENST00000457828 KDM2BQ8NHM5 1336 aa20.1■□□□□ 0.81
LSS-205ENST00000457828 C1orf115Q9H7X2 142 aa20.1■□□□□ 0.81
LSS-205ENST00000457828 NOB1Q9ULX3 412 aaKnown RBP20.1■□□□□ 0.81
LSS-205ENST00000457828 TNNQ9UQP3 1299 aa20.09■□□□□ 0.81
LSS-205ENST00000457828 MLH3Q9UHC1 1453 aa20.09■□□□□ 0.81
LSS-205ENST00000457828 PCDHB15Q9Y5E8 787 aa20.09■□□□□ 0.81
LSS-205ENST00000457828 HDAC5Q9UQL6 1122 aa20.09■□□□□ 0.81
LSS-205ENST00000457828 WDR63Q8IWG1 891 aa20.09■□□□□ 0.81
LSS-205ENST00000457828 SKOR2Q2VWA4 1001 aaPredicted RBP20.08■□□□□ 0.8
LSS-205ENST00000457828 FBLN1P23142 703 aa20.08■□□□□ 0.8
LSS-205ENST00000457828 TMX4Q9H1E5 349 aaPredicted RBP20.08■□□□□ 0.8
LSS-205ENST00000457828 KIF16BQ96L93 1317 aa20.08■□□□□ 0.8
LSS-205ENST00000457828 RBM42Q9BTD8 480 aaKnown RBP20.07■□□□□ 0.8
LSS-205ENST00000457828 FKBP5Q13451 457 aaPredicted RBP20.07■□□□□ 0.8
LSS-205ENST00000457828 FOXD4L6Q3SYB3 417 aaPredicted RBP20.07■□□□□ 0.8
LSS-205ENST00000457828 FOXD4L3Q6VB84 417 aaPredicted RBP20.07■□□□□ 0.8
LSS-205ENST00000457828 NINLQ9Y2I6 1382 aa20.07■□□□□ 0.8
LSS-205ENST00000457828 NEXNQ0ZGT2 675 aa20.06■□□□□ 0.8
LSS-205ENST00000457828 CHRNA2Q15822 529 aa20.06■□□□□ 0.8
LSS-205ENST00000457828 MAGI2Q86UL8 1455 aa20.06■□□□□ 0.8
LSS-205ENST00000457828 CFAP74Q9C0B2 1584 aa20.06■□□□□ 0.8
LSS-205ENST00000457828 ABCC1P33527 1531 aa20.06■□□□□ 0.8
LSS-205ENST00000457828 USHBP1Q8N6Y0 703 aa20.06■□□□□ 0.8
LSS-205ENST00000457828 ARHGEF5Q12774 1597 aa20.06■□□□□ 0.8
LSS-205ENST00000457828 ARHGEF12Q9NZN5 1544 aa20.06■□□□□ 0.8
LSS-205ENST00000457828 AIMP1Q12904 312 aaKnown RBP20.05■□□□□ 0.8
LSS-205ENST00000457828 ATF7IPQ6VMQ6 1270 aa20.05■□□□□ 0.8
LSS-205ENST00000457828 NPHP3Q7Z494 1330 aa20.05■□□□□ 0.8
LSS-205ENST00000457828 TMEM2Q9UHN6 1383 aa20.05■□□□□ 0.8
LSS-205ENST00000457828 SPG7Q9UQ90 795 aa20.04■□□□□ 0.8
LSS-205ENST00000457828 KCNJ4P48050 445 aa20.04■□□□□ 0.8
LSS-205ENST00000457828 GORABQ5T7V8 394 aa20.04■□□□□ 0.8
LSS-205ENST00000457828 CFAP44Q96MT7 982 aa20.04■□□□□ 0.8
LSS-205ENST00000457828 TBC1D32Q96NH3 1257 aa20.03■□□□□ 0.8
LSS-205ENST00000457828 GRPEL1Q9HAV7 217 aa20.03■□□□□ 0.8
LSS-205ENST00000457828 HMMRO75330 724 aa20.03■□□□□ 0.8
LSS-205ENST00000457828 RIMBP3CA6NJZ7 1639 aa20.03■□□□□ 0.8
LSS-205ENST00000457828 RIMBP3BA6NNM3 1639 aa20.03■□□□□ 0.8
LSS-205ENST00000457828 RIMBP3Q9UFD9 1639 aa20.03■□□□□ 0.8
LSS-205ENST00000457828 ST18O60284 1047 aa20.02■□□□□ 0.8
LSS-205ENST00000457828 RLBP1P12271 317 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms