RNA–Protein interactions for RNA: ENST00000457601.1

SDHAP1-208, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4

Gene SDHAP1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-208ENST00000457601 PER1O15534 1290 aaPredicted RBP17.2■□□□□ 0.34
SDHAP1-208ENST00000457601 AHDC1Q5TGY3 1603 aaPredicted RBP17.2■□□□□ 0.34
SDHAP1-208ENST00000457601 ZNF692Q9BU19 519 aaPredicted RBP17.19■□□□□ 0.34
SDHAP1-208ENST00000457601 USP54Q70EL1 1684 aa17.18■□□□□ 0.34
SDHAP1-208ENST00000457601 ALS2Q96Q42 1657 aa17.18■□□□□ 0.34
SDHAP1-208ENST00000457601 FOXO3O43524 673 aa17.17■□□□□ 0.34
SDHAP1-208ENST00000457601 DIEXFQ68CQ4 756 aaKnown RBP17.17■□□□□ 0.34
SDHAP1-208ENST00000457601 KNSTRNQ9Y448 316 aa17.17■□□□□ 0.34
SDHAP1-208ENST00000457601 MARF1Q9Y4F3 1742 aaKnown RBP17.17■□□□□ 0.34
SDHAP1-208ENST00000457601 NPHP3Q7Z494 1330 aa17.17■□□□□ 0.34
SDHAP1-208ENST00000457601 BRD4O60885 1362 aaPredicted RBP17.16■□□□□ 0.34
SDHAP1-208ENST00000457601 DDX17Q92841 729 aaKnown RBP17.16■□□□□ 0.34
SDHAP1-208ENST00000457601 TTC21BQ7Z4L5 1316 aa17.16■□□□□ 0.34
SDHAP1-208ENST00000457601 PHLPP1O60346 1717 aa17.16■□□□□ 0.34
SDHAP1-208ENST00000457601 XPCQ01831 940 aaPredicted RBP17.15■□□□□ 0.34
SDHAP1-208ENST00000457601 AMER1Q5JTC6 1135 aaPredicted RBP17.15■□□□□ 0.34
SDHAP1-208ENST00000457601 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
SDHAP1-208ENST00000457601 CGNL1Q0VF96 1302 aa17.15■□□□□ 0.34
SDHAP1-208ENST00000457601 NPC1L1Q9UHC9 1359 aa17.15■□□□□ 0.34
SDHAP1-208ENST00000457601 PSME1Q06323 249 aa17.14■□□□□ 0.33
SDHAP1-208ENST00000457601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.14■□□□□ 0.33
SDHAP1-208ENST00000457601 TTC21AQ8NDW8 1320 aa17.14■□□□□ 0.33
SDHAP1-208ENST00000457601 NSD2O96028 1365 aa17.14■□□□□ 0.33
SDHAP1-208ENST00000457601 COL16A1Q07092 1604 aaPredicted RBP17.14■□□□□ 0.33
SDHAP1-208ENST00000457601 KRT28Q7Z3Y7 464 aa17.13■□□□□ 0.33
SDHAP1-208ENST00000457601 OVOS2A0A0J9YW53 1432 aa17.13■□□□□ 0.33
SDHAP1-208ENST00000457601 TNS3Q68CZ2 1445 aa17.13■□□□□ 0.33
SDHAP1-208ENST00000457601 OVOS2Q6IE36 1432 aa17.13■□□□□ 0.33
SDHAP1-208ENST00000457601 SBNO1A3KN83 1393 aa17.12■□□□□ 0.33
SDHAP1-208ENST00000457601 CRYBG1Q9Y4K1 1723 aa17.11■□□□□ 0.33
SDHAP1-208ENST00000457601 NME9Q86XW9 330 aa17.11■□□□□ 0.33
SDHAP1-208ENST00000457601 SOS2Q07890 1332 aaPredicted RBP17.11■□□□□ 0.33
SDHAP1-208ENST00000457601 FYB1O15117 783 aa17.1■□□□□ 0.33
SDHAP1-208ENST00000457601 CNGB1Q14028 1251 aaPredicted RBP17.1■□□□□ 0.33
SDHAP1-208ENST00000457601 CC2D1BQ5T0F9 858 aaKnown RBP17.1■□□□□ 0.33
SDHAP1-208ENST00000457601 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
SDHAP1-208ENST00000457601 PAK3O75914 559 aaPredicted RBP17.09■□□□□ 0.33
SDHAP1-208ENST00000457601 GGNBP2Q9H3C7 697 aa17.09■□□□□ 0.33
SDHAP1-208ENST00000457601 PHRF1Q9P1Y6 1649 aaKnown RBP17.09■□□□□ 0.33
SDHAP1-208ENST00000457601 ABCA3Q99758 1704 aa17.09■□□□□ 0.33
SDHAP1-208ENST00000457601 USP31Q70CQ4 1352 aa17.08■□□□□ 0.32
SDHAP1-208ENST00000457601 ZRANB1Q9UGI0 708 aa17.08■□□□□ 0.32
SDHAP1-208ENST00000457601 SLIT3O75094 1523 aa17.07■□□□□ 0.32
SDHAP1-208ENST00000457601 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
SDHAP1-208ENST00000457601 ANP32CO43423 234 aa17.06■□□□□ 0.32
SDHAP1-208ENST00000457601 PRKRIP1Q9H875 184 aaPredicted RBP17.06■□□□□ 0.32
SDHAP1-208ENST00000457601 COL22A1Q8NFW1 1626 aaPredicted RBP17.06■□□□□ 0.32
SDHAP1-208ENST00000457601 ARHGEF10O15013 1369 aa17.05■□□□□ 0.32
SDHAP1-208ENST00000457601 ABTB2Q8N961 1025 aa17.05■□□□□ 0.32
SDHAP1-208ENST00000457601 NUTM2GQ5VZR2 741 aa17.04■□□□□ 0.32
SDHAP1-208ENST00000457601 COG3Q96JB2 828 aa17.04■□□□□ 0.32
SDHAP1-208ENST00000457601 NFAT5O94916 1531 aa17.04■□□□□ 0.32
SDHAP1-208ENST00000457601 SHPRHQ149N8 1683 aa17.04■□□□□ 0.32
SDHAP1-208ENST00000457601 USP19O94966 1318 aa17.03■□□□□ 0.32
SDHAP1-208ENST00000457601 NLRP6P59044 892 aa17.03■□□□□ 0.32
SDHAP1-208ENST00000457601 LMOD2Q6P5Q4 547 aa17.03■□□□□ 0.32
SDHAP1-208ENST00000457601 MORC1Q86VD1 984 aa17.03■□□□□ 0.32
SDHAP1-208ENST00000457601 RALBP1Q15311 655 aa17.02■□□□□ 0.32
SDHAP1-208ENST00000457601 LTN1O94822 1766 aa17.01■□□□□ 0.31
SDHAP1-208ENST00000457601 PNPLA6Q8IY17 1366 aa17.01■□□□□ 0.31
SDHAP1-208ENST00000457601 NLRP13Q86W25 1043 aa17■□□□□ 0.31
SDHAP1-208ENST00000457601 MAP2P11137 1827 aaKnown RBP17■□□□□ 0.31
SDHAP1-208ENST00000457601 MYBBP1AQ9BQG0 1328 aaKnown RBP16.99■□□□□ 0.31
SDHAP1-208ENST00000457601 TNNT2P45379 298 aaPredicted RBP16.99■□□□□ 0.31
SDHAP1-208ENST00000457601 LRRC59Q96AG4 307 aaKnown RBP16.99■□□□□ 0.31
SDHAP1-208ENST00000457601 PEAK1Q9H792 1746 aa16.99■□□□□ 0.31
SDHAP1-208ENST00000457601 SMG6Q86US8 1419 aaKnown RBP16.98■□□□□ 0.31
SDHAP1-208ENST00000457601 MIER1Q8N108 512 aa16.98■□□□□ 0.31
SDHAP1-208ENST00000457601 RGS17Q9UGC6 210 aaPredicted RBP16.98■□□□□ 0.31
SDHAP1-208ENST00000457601 AATKQ6ZMQ8 1374 aa16.98■□□□□ 0.31
SDHAP1-208ENST00000457601 PPP2R1AP30153 589 aa16.97■□□□□ 0.31
SDHAP1-208ENST00000457601 SOX12O15370 315 aa16.96■□□□□ 0.31
SDHAP1-208ENST00000457601 PLEKHG5O94827 1062 aa16.96■□□□□ 0.31
SDHAP1-208ENST00000457601 FBLN1P23142 703 aa16.95■□□□□ 0.3
SDHAP1-208ENST00000457601 CABLES1Q8TDN4 633 aa16.95■□□□□ 0.3
SDHAP1-208ENST00000457601 CDK12Q9NYV4 1490 aaPredicted RBP16.94■□□□□ 0.3
SDHAP1-208ENST00000457601 JCADQ9P266 1359 aa16.93■□□□□ 0.3
SDHAP1-208ENST00000457601 GCP02774 474 aa16.93■□□□□ 0.3
SDHAP1-208ENST00000457601 KCNH5Q8NCM2 988 aa16.93■□□□□ 0.3
SDHAP1-208ENST00000457601 COL3A1P02461 1466 aaPredicted RBP16.93■□□□□ 0.3
SDHAP1-208ENST00000457601 RRS1Q15050 365 aaKnown RBP16.92■□□□□ 0.3
SDHAP1-208ENST00000457601 POLKQ9UBT6 870 aa16.92■□□□□ 0.3
SDHAP1-208ENST00000457601 EMILIN1Q9Y6C2 1016 aa16.92■□□□□ 0.3
SDHAP1-208ENST00000457601 MAP3K19Q56UN5 1328 aa16.92■□□□□ 0.3
SDHAP1-208ENST00000457601 ABCC6O95255 1503 aa16.91■□□□□ 0.3
SDHAP1-208ENST00000457601 COL18A1P39060 1754 aa16.91■□□□□ 0.3
SDHAP1-208ENST00000457601 RTL1A6NKG5 1358 aa16.9■□□□□ 0.3
SDHAP1-208ENST00000457601 LMO7Q8WWI1 1683 aa16.9■□□□□ 0.3
SDHAP1-208ENST00000457601 CPDO75976 1380 aa16.89■□□□□ 0.3
SDHAP1-208ENST00000457601 MTHFSP49914 203 aa16.89■□□□□ 0.29
SDHAP1-208ENST00000457601 CCDC184Q52MB2 194 aa16.89■□□□□ 0.29
SDHAP1-208ENST00000457601 POTEAQ6S8J7 498 aa16.89■□□□□ 0.29
SDHAP1-208ENST00000457601 RGPD5Q99666 1765 aa16.89■□□□□ 0.29
SDHAP1-208ENST00000457601 FLT4P35916 1363 aa16.89■□□□□ 0.29
SDHAP1-208ENST00000457601 KIF24Q5T7B8 1368 aa16.89■□□□□ 0.29
SDHAP1-208ENST00000457601 KIAA0232Q92628 1395 aa16.89■□□□□ 0.29
SDHAP1-208ENST00000457601 CCER2I3L3R5 266 aa16.88■□□□□ 0.29
SDHAP1-208ENST00000457601 HAP1P54257 671 aaPredicted RBP16.88■□□□□ 0.29
SDHAP1-208ENST00000457601 ZC3H6P61129 1189 aaKnown RBP16.88■□□□□ 0.29
SDHAP1-208ENST00000457601 PLCH1Q4KWH8 1693 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms