RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 HAP1P54257 671 aaPredicted RBP17.81■□□□□ 0.44
VEGFA-210ENST00000457104 CCDC61Q9Y6R9 512 aa17.81■□□□□ 0.44
VEGFA-210ENST00000457104 BRWD3Q6RI45 1802 aa17.81■□□□□ 0.44
VEGFA-210ENST00000457104 ACEP12821 1306 aa17.8■□□□□ 0.44
VEGFA-210ENST00000457104 PLEKHG3A1L390 1219 aa17.8■□□□□ 0.44
VEGFA-210ENST00000457104 FAM83GA6ND36 823 aa17.8■□□□□ 0.44
VEGFA-210ENST00000457104 TRIM26Q12899 539 aaPredicted RBP17.8■□□□□ 0.44
VEGFA-210ENST00000457104 COL14A1Q05707 1796 aaKnown RBP17.79■□□□□ 0.44
VEGFA-210ENST00000457104 NBPF8Q3BBV2 869 aa17.79■□□□□ 0.44
VEGFA-210ENST00000457104 RALGAPBQ86X10 1494 aa17.79■□□□□ 0.44
VEGFA-210ENST00000457104 PHRF1Q9P1Y6 1649 aaKnown RBP17.79■□□□□ 0.44
VEGFA-210ENST00000457104 PAK3O75914 559 aaPredicted RBP17.78■□□□□ 0.44
VEGFA-210ENST00000457104 ROCK2O75116 1388 aaKnown RBP17.77■□□□□ 0.43
VEGFA-210ENST00000457104 SRPK2P78362 688 aaKnown RBP17.76■□□□□ 0.43
VEGFA-210ENST00000457104 CABP2Q9NPB3 220 aa17.76■□□□□ 0.43
VEGFA-210ENST00000457104 PPIP5K1Q6PFW1 1433 aa17.75■□□□□ 0.43
VEGFA-210ENST00000457104 VPS72Q15906 364 aa17.75■□□□□ 0.43
VEGFA-210ENST00000457104 ATAD2Q6PL18 1390 aa17.74■□□□□ 0.43
VEGFA-210ENST00000457104 BTG4Q9NY30 223 aa17.72■□□□□ 0.43
VEGFA-210ENST00000457104 ONECUT3O60422 494 aaPredicted RBP17.71■□□□□ 0.43
VEGFA-210ENST00000457104 NUTM2GQ5VZR2 741 aa17.71■□□□□ 0.43
VEGFA-210ENST00000457104 AKAP12Q02952 1782 aa17.71■□□□□ 0.43
VEGFA-210ENST00000457104 NRKQ7Z2Y5 1582 aa17.7■□□□□ 0.42
VEGFA-210ENST00000457104 CABP1Q9NZU7 370 aa17.7■□□□□ 0.42
VEGFA-210ENST00000457104 EVC2Q86UK5 1308 aa17.7■□□□□ 0.42
VEGFA-210ENST00000457104 KIAA0232Q92628 1395 aa17.69■□□□□ 0.42
VEGFA-210ENST00000457104 TONSLQ96HA7 1378 aa17.68■□□□□ 0.42
VEGFA-210ENST00000457104 USP6P35125 1406 aa17.68■□□□□ 0.42
VEGFA-210ENST00000457104 ABTB2Q8N961 1025 aa17.68■□□□□ 0.42
VEGFA-210ENST00000457104 PRDM11Q9NQV5 511 aa17.68■□□□□ 0.42
VEGFA-210ENST00000457104 CCDC9Q9Y3X0 531 aaKnown RBP17.68■□□□□ 0.42
VEGFA-210ENST00000457104 SEPT12Q8IYM1 358 aa17.67■□□□□ 0.42
VEGFA-210ENST00000457104 PIK3C2AO00443 1686 aa17.67■□□□□ 0.42
VEGFA-210ENST00000457104 USP19O94966 1318 aa17.67■□□□□ 0.42
VEGFA-210ENST00000457104 BRD4O60885 1362 aaPredicted RBP17.66■□□□□ 0.42
VEGFA-210ENST00000457104 SSH2Q76I76 1423 aa17.66■□□□□ 0.42
VEGFA-210ENST00000457104 CHRNA2Q15822 529 aa17.66■□□□□ 0.42
VEGFA-210ENST00000457104 LMO7Q8WWI1 1683 aa17.66■□□□□ 0.42
VEGFA-210ENST00000457104 SBNO2Q9Y2G9 1366 aa17.66■□□□□ 0.42
VEGFA-210ENST00000457104 ZC3H6P61129 1189 aaKnown RBP17.65■□□□□ 0.42
VEGFA-210ENST00000457104 CARD11Q9BXL7 1154 aa17.65■□□□□ 0.42
VEGFA-210ENST00000457104 SPATA31A5Q5VU36 1347 aa17.65■□□□□ 0.42
VEGFA-210ENST00000457104 SPATA31A7Q8IWB4 1347 aa17.65■□□□□ 0.42
VEGFA-210ENST00000457104 THSD7AQ9UPZ6 1657 aa17.64■□□□□ 0.41
VEGFA-210ENST00000457104 NLRP13Q86W25 1043 aa17.63■□□□□ 0.41
VEGFA-210ENST00000457104 CAMTA1Q9Y6Y1 1673 aa17.63■□□□□ 0.41
VEGFA-210ENST00000457104 MON2Q7Z3U7 1717 aa17.63■□□□□ 0.41
VEGFA-210ENST00000457104 CPDO75976 1380 aa17.63■□□□□ 0.41
VEGFA-210ENST00000457104 FAM98CQ17RN3 349 aaKnown RBP17.62■□□□□ 0.41
VEGFA-210ENST00000457104 CPSF1Q10570 1443 aaKnown RBP17.62■□□□□ 0.41
VEGFA-210ENST00000457104 SLIT3O75094 1523 aa17.62■□□□□ 0.41
VEGFA-210ENST00000457104 GCP02774 474 aa17.61■□□□□ 0.41
VEGFA-210ENST00000457104 CCDC125Q86Z20 511 aa17.61■□□□□ 0.41
VEGFA-210ENST00000457104 ZNF692Q9BU19 519 aaPredicted RBP17.6■□□□□ 0.41
VEGFA-210ENST00000457104 SPATA31A1Q5TZJ5 1347 aa17.6■□□□□ 0.41
VEGFA-210ENST00000457104 COL18A1P39060 1754 aa17.6■□□□□ 0.41
VEGFA-210ENST00000457104 NLRP6P59044 892 aa17.59■□□□□ 0.41
VEGFA-210ENST00000457104 KRT27Q7Z3Y8 459 aa17.59■□□□□ 0.41
VEGFA-210ENST00000457104 RGPD5Q99666 1765 aa17.58■□□□□ 0.41
VEGFA-210ENST00000457104 BLMP54132 1417 aaPredicted RBP17.58■□□□□ 0.41
VEGFA-210ENST00000457104 TTC21BQ7Z4L5 1316 aa17.58■□□□□ 0.4
VEGFA-210ENST00000457104 STRN4Q9NRL3 753 aa17.58■□□□□ 0.4
VEGFA-210ENST00000457104 CD163L1Q9NR16 1453 aa17.57■□□□□ 0.4
VEGFA-210ENST00000457104 A0A0G2JS52 829 aa17.56■□□□□ 0.4
VEGFA-210ENST00000457104 MYT1Q01538 1121 aa17.56■□□□□ 0.4
VEGFA-210ENST00000457104 KTN1Q86UP2 1357 aaKnown RBP17.55■□□□□ 0.4
VEGFA-210ENST00000457104 USP54Q70EL1 1684 aa17.55■□□□□ 0.4
VEGFA-210ENST00000457104 TESK2Q96S53 571 aa17.55■□□□□ 0.4
VEGFA-210ENST00000457104 COL5A2P05997 1499 aaPredicted RBP17.55■□□□□ 0.4
VEGFA-210ENST00000457104 TTC21AQ8NDW8 1320 aa17.54■□□□□ 0.4
VEGFA-210ENST00000457104 EVA1CP58658 441 aa17.54■□□□□ 0.4
VEGFA-210ENST00000457104 LARP1Q6PKG0 1096 aaKnown RBP17.54■□□□□ 0.4
VEGFA-210ENST00000457104 AATKQ6ZMQ8 1374 aa17.53■□□□□ 0.4
VEGFA-210ENST00000457104 FAM182BQ5T319 152 aa17.53■□□□□ 0.4
VEGFA-210ENST00000457104 RGPD1P0DJD0 1748 aa17.52■□□□□ 0.4
VEGFA-210ENST00000457104 ST20-MTHFSA0A0A6YYL1 179 aa17.52■□□□□ 0.4
VEGFA-210ENST00000457104 PUS7Q96PZ0 661 aaKnown RBP17.52■□□□□ 0.4
VEGFA-210ENST00000457104 SLC12A5Q9H2X9 1139 aa17.52■□□□□ 0.4
VEGFA-210ENST00000457104 USP35Q9P2H5 1018 aa17.52■□□□□ 0.4
VEGFA-210ENST00000457104 NFAT5O94916 1531 aa17.52■□□□□ 0.39
VEGFA-210ENST00000457104 BARGINQ6ZT62 677 aa17.51■□□□□ 0.39
VEGFA-210ENST00000457104 DEFB132Q7Z7B7 95 aa17.51■□□□□ 0.39
VEGFA-210ENST00000457104 TNS1Q9HBL0 1735 aaKnown RBP17.51■□□□□ 0.39
VEGFA-210ENST00000457104 PARP4Q9UKK3 1724 aaKnown RBP17.51■□□□□ 0.39
VEGFA-210ENST00000457104 SRCAPQ6ZRS2 3230 aa17.5■□□□□ 0.39
VEGFA-210ENST00000457104 ARHGEF25Q86VW2 580 aa17.5■□□□□ 0.39
VEGFA-210ENST00000457104 ZRANB1Q9UGI0 708 aa17.5■□□□□ 0.39
VEGFA-210ENST00000457104 AXIN2Q9Y2T1 843 aa17.5■□□□□ 0.39
VEGFA-210ENST00000457104 WNK3Q9BYP7 1800 aa17.49■□□□□ 0.39
VEGFA-210ENST00000457104 LTN1O94822 1766 aa17.49■□□□□ 0.39
VEGFA-210ENST00000457104 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
VEGFA-210ENST00000457104 TCP11L2Q8N4U5 519 aa17.49■□□□□ 0.39
VEGFA-210ENST00000457104 TMC1Q8TDI8 760 aa17.49■□□□□ 0.39
VEGFA-210ENST00000457104 CRB1P82279 1406 aa17.48■□□□□ 0.39
VEGFA-210ENST00000457104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.48■□□□□ 0.39
VEGFA-210ENST00000457104 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
VEGFA-210ENST00000457104 USP31Q70CQ4 1352 aa17.48■□□□□ 0.39
VEGFA-210ENST00000457104 SF3B2Q13435 895 aaKnown RBP17.47■□□□□ 0.39
VEGFA-210ENST00000457104 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
VEGFA-210ENST00000457104 THRAP3Q9Y2W1 955 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms