RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 EIF3AQ14152 1382 aaKnown RBP17.61■□□□□ 0.41
LMCD1-206ENST00000456506 LMO7Q8WWI1 1683 aa17.61■□□□□ 0.41
LMCD1-206ENST00000456506 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
LMCD1-206ENST00000456506 LMOD2Q6P5Q4 547 aa17.6■□□□□ 0.41
LMCD1-206ENST00000456506 RREB1Q92766 1687 aa17.59■□□□□ 0.41
LMCD1-206ENST00000456506 NRKQ7Z2Y5 1582 aa17.59■□□□□ 0.41
LMCD1-206ENST00000456506 WASLO00401 505 aaPredicted RBP17.59■□□□□ 0.41
LMCD1-206ENST00000456506 BTG4Q9NY30 223 aa17.59■□□□□ 0.41
LMCD1-206ENST00000456506 GPRASP1Q5JY77 1395 aa17.57■□□□□ 0.4
LMCD1-206ENST00000456506 SPATA31A5Q5VU36 1347 aa17.57■□□□□ 0.4
LMCD1-206ENST00000456506 SPATA31A7Q8IWB4 1347 aa17.57■□□□□ 0.4
LMCD1-206ENST00000456506 CCDC9Q9Y3X0 531 aaKnown RBP17.57■□□□□ 0.4
LMCD1-206ENST00000456506 DISP2A7MBM2 1401 aa17.56■□□□□ 0.4
LMCD1-206ENST00000456506 FAM98CQ17RN3 349 aaKnown RBP17.56■□□□□ 0.4
LMCD1-206ENST00000456506 DCAF11Q8TEB1 546 aa17.56■□□□□ 0.4
LMCD1-206ENST00000456506 NUP188Q5SRE5 1749 aa17.55■□□□□ 0.4
LMCD1-206ENST00000456506 WNK3Q9BYP7 1800 aa17.54■□□□□ 0.4
LMCD1-206ENST00000456506 POLR3AO14802 1390 aaPredicted RBP17.53■□□□□ 0.4
LMCD1-206ENST00000456506 PARP4Q9UKK3 1724 aaKnown RBP17.53■□□□□ 0.4
LMCD1-206ENST00000456506 QRICH2Q9H0J4 1663 aa17.53■□□□□ 0.4
LMCD1-206ENST00000456506 STAC3Q96MF2 364 aa17.53■□□□□ 0.4
LMCD1-206ENST00000456506 KDM2AQ9Y2K7 1162 aa17.53■□□□□ 0.4
LMCD1-206ENST00000456506 SBF2Q86WG5 1849 aa17.53■□□□□ 0.4
LMCD1-206ENST00000456506 SF3B2Q13435 895 aaKnown RBP17.52■□□□□ 0.4
LMCD1-206ENST00000456506 KIAA0232Q92628 1395 aa17.52■□□□□ 0.39
LMCD1-206ENST00000456506 CAMTA1Q9Y6Y1 1673 aa17.52■□□□□ 0.39
LMCD1-206ENST00000456506 NUDT16Q96DE0 195 aaKnown RBP17.51■□□□□ 0.39
LMCD1-206ENST00000456506 FAM182BQ5T319 152 aa17.5■□□□□ 0.39
LMCD1-206ENST00000456506 NGDNQ8NEJ9 315 aaKnown RBP17.5■□□□□ 0.39
LMCD1-206ENST00000456506 PEAK1Q9H792 1746 aa17.5■□□□□ 0.39
LMCD1-206ENST00000456506 SPATA31A1Q5TZJ5 1347 aa17.49■□□□□ 0.39
LMCD1-206ENST00000456506 COL18A1P39060 1754 aa17.49■□□□□ 0.39
LMCD1-206ENST00000456506 HRCP23327 699 aa17.49■□□□□ 0.39
LMCD1-206ENST00000456506 BAG6P46379 1132 aa17.49■□□□□ 0.39
LMCD1-206ENST00000456506 PSDA5PKW4 1024 aaPredicted RBP17.47■□□□□ 0.39
LMCD1-206ENST00000456506 EN1Q05925 392 aaPredicted RBP17.47■□□□□ 0.39
LMCD1-206ENST00000456506 PRDM11Q9NQV5 511 aa17.47■□□□□ 0.39
LMCD1-206ENST00000456506 RGPD3A6NKT7 1758 aaPredicted RBP17.47■□□□□ 0.39
LMCD1-206ENST00000456506 RGPD4Q7Z3J3 1758 aa17.47■□□□□ 0.39
LMCD1-206ENST00000456506 RGPD5Q99666 1765 aa17.47■□□□□ 0.39
LMCD1-206ENST00000456506 SSH2Q76I76 1423 aa17.47■□□□□ 0.39
LMCD1-206ENST00000456506 AKAP12Q02952 1782 aa17.46■□□□□ 0.39
LMCD1-206ENST00000456506 PIK3C2AO00443 1686 aa17.46■□□□□ 0.39
LMCD1-206ENST00000456506 A0A0G2JS52 829 aa17.46■□□□□ 0.39
LMCD1-206ENST00000456506 PAK3O75914 559 aaPredicted RBP17.46■□□□□ 0.39
LMCD1-206ENST00000456506 MYT1Q01538 1121 aa17.46■□□□□ 0.39
LMCD1-206ENST00000456506 PLEKHG3A1L390 1219 aa17.45■□□□□ 0.38
LMCD1-206ENST00000456506 CHRNA2Q15822 529 aa17.45■□□□□ 0.38
LMCD1-206ENST00000456506 CDK19Q9BWU1 502 aa17.45■□□□□ 0.38
LMCD1-206ENST00000456506 ACEP12821 1306 aa17.45■□□□□ 0.38
LMCD1-206ENST00000456506 LRRC37A3O60309 1634 aa17.44■□□□□ 0.38
LMCD1-206ENST00000456506 CPDO75976 1380 aa17.44■□□□□ 0.38
LMCD1-206ENST00000456506 USP19O94966 1318 aa17.44■□□□□ 0.38
LMCD1-206ENST00000456506 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
LMCD1-206ENST00000456506 SLIT3O75094 1523 aa17.43■□□□□ 0.38
LMCD1-206ENST00000456506 NBPF8Q3BBV2 869 aa17.43■□□□□ 0.38
LMCD1-206ENST00000456506 CAMKK2Q96RR4 588 aa17.42■□□□□ 0.38
LMCD1-206ENST00000456506 CCDC61Q9Y6R9 512 aa17.42■□□□□ 0.38
LMCD1-206ENST00000456506 ZC3H6P61129 1189 aaKnown RBP17.41■□□□□ 0.38
LMCD1-206ENST00000456506 EZH2Q15910 746 aaKnown RBP17.41■□□□□ 0.38
LMCD1-206ENST00000456506 NBPF1Q3BBV0 1214 aa17.41■□□□□ 0.38
LMCD1-206ENST00000456506 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
LMCD1-206ENST00000456506 COL5A2P05997 1499 aaPredicted RBP17.41■□□□□ 0.38
LMCD1-206ENST00000456506 PPIP5K1Q6PFW1 1433 aa17.4■□□□□ 0.38
LMCD1-206ENST00000456506 BARGINQ6ZT62 677 aa17.4■□□□□ 0.38
LMCD1-206ENST00000456506 R3HDM1Q15032 1099 aaKnown RBP17.39■□□□□ 0.37
LMCD1-206ENST00000456506 STRN4Q9NRL3 753 aa17.39■□□□□ 0.37
LMCD1-206ENST00000456506 PARD3Q8TEW0 1356 aa17.39■□□□□ 0.37
LMCD1-206ENST00000456506 TRIM37O94972 964 aa17.38■□□□□ 0.37
LMCD1-206ENST00000456506 FAM196AQ6ZSG2 479 aa17.38■□□□□ 0.37
LMCD1-206ENST00000456506 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
LMCD1-206ENST00000456506 CASZ1Q86V15 1759 aa17.37■□□□□ 0.37
LMCD1-206ENST00000456506 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
LMCD1-206ENST00000456506 MON2Q7Z3U7 1717 aa17.35■□□□□ 0.37
LMCD1-206ENST00000456506 ABTB2Q8N961 1025 aa17.35■□□□□ 0.37
LMCD1-206ENST00000456506 BRD4O60885 1362 aaPredicted RBP17.35■□□□□ 0.37
LMCD1-206ENST00000456506 USP6P35125 1406 aa17.35■□□□□ 0.37
LMCD1-206ENST00000456506 USP35Q9P2H5 1018 aa17.34■□□□□ 0.37
LMCD1-206ENST00000456506 CENPJQ9HC77 1338 aaPredicted RBP17.33■□□□□ 0.36
LMCD1-206ENST00000456506 GCP02774 474 aa17.33■□□□□ 0.36
LMCD1-206ENST00000456506 CRB1P82279 1406 aa17.32■□□□□ 0.36
LMCD1-206ENST00000456506 TCP11L2Q8N4U5 519 aa17.32■□□□□ 0.36
LMCD1-206ENST00000456506 APBA3O96018 575 aa17.31■□□□□ 0.36
LMCD1-206ENST00000456506 CABP2Q9NPB3 220 aa17.31■□□□□ 0.36
LMCD1-206ENST00000456506 THRAP3Q9Y2W1 955 aaKnown RBP17.31■□□□□ 0.36
LMCD1-206ENST00000456506 LTN1O94822 1766 aa17.3■□□□□ 0.36
LMCD1-206ENST00000456506 AATKQ6ZMQ8 1374 aa17.3■□□□□ 0.36
LMCD1-206ENST00000456506 EVA1CP58658 441 aa17.3■□□□□ 0.36
LMCD1-206ENST00000456506 NLRP13Q86W25 1043 aa17.3■□□□□ 0.36
LMCD1-206ENST00000456506 PDE3BQ13370 1112 aa17.29■□□□□ 0.36
LMCD1-206ENST00000456506 NFAT5O94916 1531 aa17.29■□□□□ 0.36
LMCD1-206ENST00000456506 SRPK2P78362 688 aaKnown RBP17.28■□□□□ 0.36
LMCD1-206ENST00000456506 OVOS2A0A0G2JMS6 1433 aa17.27■□□□□ 0.35
LMCD1-206ENST00000456506 OVOS2A0A0J9YW53 1432 aa17.27■□□□□ 0.35
LMCD1-206ENST00000456506 OVOS2Q6IE36 1432 aa17.27■□□□□ 0.35
LMCD1-206ENST00000456506 CABP1Q9NZU7 370 aa17.26■□□□□ 0.35
LMCD1-206ENST00000456506 CPSF1Q10570 1443 aaKnown RBP17.26■□□□□ 0.35
LMCD1-206ENST00000456506 ABCC6O95255 1503 aa17.26■□□□□ 0.35
LMCD1-206ENST00000456506 BCL9O00512 1426 aa17.25■□□□□ 0.35
LMCD1-206ENST00000456506 NHSQ6T4R5 1651 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms