RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 HSCBQ8IWL3 235 aa23.84■■□□□ 1.41
SEMA3B-208ENST00000456210 QRICH2Q9H0J4 1663 aa23.84■■□□□ 1.41
SEMA3B-208ENST00000456210 ABCC3O15438 1527 aa23.84■■□□□ 1.41
SEMA3B-208ENST00000456210 RRP9O43818 475 aaKnown RBP23.83■■□□□ 1.41
SEMA3B-208ENST00000456210 MFAP1P55081 439 aaKnown RBP23.83■■□□□ 1.41
SEMA3B-208ENST00000456210 CFAP65Q6ZU64 1925 aaKnown RBP23.83■■□□□ 1.41
SEMA3B-208ENST00000456210 NPATQ14207 1427 aa23.83■■□□□ 1.4
SEMA3B-208ENST00000456210 DZIP1LQ8IYY4 767 aaKnown RBP23.82■■□□□ 1.4
SEMA3B-208ENST00000456210 ADGRF5Q8IZF2 1346 aa23.81■■□□□ 1.4
SEMA3B-208ENST00000456210 SNX21Q969T3 373 aa23.81■■□□□ 1.4
SEMA3B-208ENST00000456210 HSP90AA1P07900 732 aaKnown RBP23.8■■□□□ 1.4
SEMA3B-208ENST00000456210 PLPPR3Q6T4P5 718 aa23.8■■□□□ 1.4
SEMA3B-208ENST00000456210 RBM25P49756 843 aaKnown RBP23.8■■□□□ 1.4
SEMA3B-208ENST00000456210 CAMSAP1Q5T5Y3 1602 aa23.8■■□□□ 1.4
SEMA3B-208ENST00000456210 FTSJ3Q8IY81 847 aaKnown RBP23.79■■□□□ 1.4
SEMA3B-208ENST00000456210 CIZ1Q9ULV3 898 aaPredicted RBP23.79■■□□□ 1.4
SEMA3B-208ENST00000456210 ESPNB1AK53 854 aa23.79■■□□□ 1.4
SEMA3B-208ENST00000456210 SMC5Q8IY18 1101 aa23.79■■□□□ 1.4
SEMA3B-208ENST00000456210 CFAP53Q96M91 514 aa23.77■■□□□ 1.4
SEMA3B-208ENST00000456210 CLTCQ00610 1675 aaKnown RBP23.77■■□□□ 1.4
SEMA3B-208ENST00000456210 ADGRB3O60242 1522 aa23.77■■□□□ 1.39
SEMA3B-208ENST00000456210 DDX19BQ9UMR2 479 aa23.76■■□□□ 1.39
SEMA3B-208ENST00000456210 HSP90AA2PQ14568 343 aaPredicted RBP23.75■■□□□ 1.39
SEMA3B-208ENST00000456210 PTMSP20962 102 aa23.74■■□□□ 1.39
SEMA3B-208ENST00000456210 MTHFSP49914 203 aa23.74■■□□□ 1.39
SEMA3B-208ENST00000456210 ERBB4Q15303 1308 aa23.74■■□□□ 1.39
SEMA3B-208ENST00000456210 NSD2O96028 1365 aa23.74■■□□□ 1.39
SEMA3B-208ENST00000456210 TRIM27P14373 513 aa23.72■■□□□ 1.39
SEMA3B-208ENST00000456210 CEBPAP49715 358 aaPredicted RBP23.72■■□□□ 1.39
SEMA3B-208ENST00000456210 FER1L4A9Z1Z3 1794 aa23.72■■□□□ 1.39
SEMA3B-208ENST00000456210 SKOR2Q2VWA4 1001 aaPredicted RBP23.72■■□□□ 1.39
SEMA3B-208ENST00000456210 ESF1Q9H501 851 aaKnown RBP23.72■■□□□ 1.39
SEMA3B-208ENST00000456210 RAB3GAP1Q15042 981 aa23.71■■□□□ 1.39
SEMA3B-208ENST00000456210 TNPO1Q92973 898 aaKnown RBP23.71■■□□□ 1.39
SEMA3B-208ENST00000456210 GBP4Q96PP9 640 aa23.71■■□□□ 1.39
SEMA3B-208ENST00000456210 PPLO60437 1756 aa23.71■■□□□ 1.39
SEMA3B-208ENST00000456210 ADGRB1O14514 1584 aa23.71■■□□□ 1.39
SEMA3B-208ENST00000456210 NOS1P29475 1434 aa23.71■■□□□ 1.39
SEMA3B-208ENST00000456210 ARHGAP31Q2M1Z3 1444 aa23.71■■□□□ 1.39
SEMA3B-208ENST00000456210 TNNT2P45379 298 aaPredicted RBP23.71■■□□□ 1.39
SEMA3B-208ENST00000456210 SMC4Q9NTJ3 1288 aa23.7■■□□□ 1.38
SEMA3B-208ENST00000456210 ATF7IPQ6VMQ6 1270 aa23.69■■□□□ 1.38
SEMA3B-208ENST00000456210 SLC12A5Q9H2X9 1139 aa23.69■■□□□ 1.38
SEMA3B-208ENST00000456210 CHGAP10645 457 aaKnown RBP23.69■■□□□ 1.38
SEMA3B-208ENST00000456210 ABCC11Q96J66 1382 aa23.69■■□□□ 1.38
SEMA3B-208ENST00000456210 FBXO31Q5XUX0 539 aaPredicted RBP23.68■■□□□ 1.38
SEMA3B-208ENST00000456210 PKNOX2Q96KN3 472 aa23.68■■□□□ 1.38
SEMA3B-208ENST00000456210 TRIM44Q96DX7 344 aaPredicted RBP23.68■■□□□ 1.38
SEMA3B-208ENST00000456210 ADAMTSL3P82987 1691 aa23.67■■□□□ 1.38
SEMA3B-208ENST00000456210 RIMS1Q86UR5 1692 aaKnown RBP23.67■■□□□ 1.38
SEMA3B-208ENST00000456210 NUCB1Q02818 461 aa23.67■■□□□ 1.38
SEMA3B-208ENST00000456210 GAS2L3Q86XJ1 694 aa23.67■■□□□ 1.38
SEMA3B-208ENST00000456210 ITPRIPQ8IWB1 547 aa23.67■■□□□ 1.38
SEMA3B-208ENST00000456210 ZBTB40Q9NUA8 1239 aa23.66■■□□□ 1.38
SEMA3B-208ENST00000456210 PIK3C2BO00750 1634 aa23.66■■□□□ 1.38
SEMA3B-208ENST00000456210 PUS7Q96PZ0 661 aaKnown RBP23.66■■□□□ 1.38
SEMA3B-208ENST00000456210 IL16Q14005 1332 aa23.65■■□□□ 1.38
SEMA3B-208ENST00000456210 TPM2P07951 284 aa23.65■■□□□ 1.38
SEMA3B-208ENST00000456210 SSH1Q8WYL5 1049 aa23.65■■□□□ 1.38
SEMA3B-208ENST00000456210 RPGRIP1LQ68CZ1 1315 aa23.64■■□□□ 1.38
SEMA3B-208ENST00000456210 KDM4FA0A1W2PPD8 638 aa23.64■■□□□ 1.38
SEMA3B-208ENST00000456210 U2AF1L5P0DN76 240 aaPredicted RBP23.64■■□□□ 1.38
SEMA3B-208ENST00000456210 U2AF1Q01081 240 aaKnown RBP eCLIP23.64■■□□□ 1.38
SEMA3B-208ENST00000456210 EXOSC9Q06265 439 aaKnown RBP23.64■■□□□ 1.38
SEMA3B-208ENST00000456210 TSR2Q969E8 191 aaKnown RBP23.64■■□□□ 1.38
SEMA3B-208ENST00000456210 ANKRD36BQ8N2N9 1353 aa23.64■■□□□ 1.37
SEMA3B-208ENST00000456210 IBTKQ9P2D0 1353 aaPredicted RBP23.63■■□□□ 1.37
SEMA3B-208ENST00000456210 HSP90AB1P08238 724 aaKnown RBP23.63■■□□□ 1.37
SEMA3B-208ENST00000456210 PPP6R1Q9UPN7 881 aa23.63■■□□□ 1.37
SEMA3B-208ENST00000456210 COL3A1P02461 1466 aaPredicted RBP23.62■■□□□ 1.37
SEMA3B-208ENST00000456210 BMP2KLQ5H9B9 411 aa23.62■■□□□ 1.37
SEMA3B-208ENST00000456210 KIF16BQ96L93 1317 aa23.62■■□□□ 1.37
SEMA3B-208ENST00000456210 MED14O60244 1454 aa23.61■■□□□ 1.37
SEMA3B-208ENST00000456210 CLEC17AQ6ZS10 378 aa23.61■■□□□ 1.37
SEMA3B-208ENST00000456210 PLEKHF1Q96S99 279 aa23.61■■□□□ 1.37
SEMA3B-208ENST00000456210 KIF2CQ99661 725 aa23.61■■□□□ 1.37
SEMA3B-208ENST00000456210 CCDC173Q0VFZ6 552 aa23.61■■□□□ 1.37
SEMA3B-208ENST00000456210 TMEM57Q8N5G2 664 aa23.61■■□□□ 1.37
SEMA3B-208ENST00000456210 PPP1R9BQ96SB3 815 aa23.61■■□□□ 1.37
SEMA3B-208ENST00000456210 ARHGEF28Q8N1W1 1705 aaKnown RBP23.6■■□□□ 1.37
SEMA3B-208ENST00000456210 C14orf93Q9H972 538 aaKnown RBP23.6■■□□□ 1.37
SEMA3B-208ENST00000456210 NOB1Q9ULX3 412 aaKnown RBP23.6■■□□□ 1.37
SEMA3B-208ENST00000456210 C3P01024 1663 aa23.6■■□□□ 1.37
SEMA3B-208ENST00000456210 ANKRD26Q9UPS8 1709 aa23.6■■□□□ 1.37
SEMA3B-208ENST00000456210 TULP4Q9NRJ4 1543 aa23.6■■□□□ 1.37
SEMA3B-208ENST00000456210 VSIG10Q8N0Z9 540 aa23.6■■□□□ 1.37
SEMA3B-208ENST00000456210 TRIM35Q9UPQ4 493 aa23.6■■□□□ 1.37
SEMA3B-208ENST00000456210 CHD1LQ86WJ1 897 aa23.59■■□□□ 1.37
SEMA3B-208ENST00000456210 TMPOP42166 694 aaKnown RBP23.58■■□□□ 1.37
SEMA3B-208ENST00000456210 TRAK1Q9UPV9 953 aa23.58■■□□□ 1.37
SEMA3B-208ENST00000456210 ZMYND15Q9H091 742 aa23.58■■□□□ 1.36
SEMA3B-208ENST00000456210 IPO8O15397 1037 aaKnown RBP23.57■■□□□ 1.36
SEMA3B-208ENST00000456210 PREX1Q8TCU6 1659 aa23.57■■□□□ 1.36
SEMA3B-208ENST00000456210 K7ELQ4 463 aaPredicted RBP23.56■■□□□ 1.36
SEMA3B-208ENST00000456210 SLC52A1Q9NWF4 448 aa23.56■■□□□ 1.36
SEMA3B-208ENST00000456210 LNPKQ9C0E8 428 aa23.55■■□□□ 1.36
SEMA3B-208ENST00000456210 ALDH1L2Q3SY69 923 aa23.55■■□□□ 1.36
SEMA3B-208ENST00000456210 KLHL40Q2TBA0 621 aa23.53■■□□□ 1.36
SEMA3B-208ENST00000456210 NEXMIFQ5QGS0 1516 aa23.52■■□□□ 1.36
SEMA3B-208ENST00000456210 CD2BP2O95400 341 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms