RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 PHRF1Q9P1Y6 1649 aaKnown RBP18.74■□□□□ 0.59
TREX1-203ENST00000456089 VPS72Q15906 364 aa18.74■□□□□ 0.59
TREX1-203ENST00000456089 CDK19Q9BWU1 502 aa18.74■□□□□ 0.59
TREX1-203ENST00000456089 SEPT12Q8IYM1 358 aa18.73■□□□□ 0.59
TREX1-203ENST00000456089 QRICH2Q9H0J4 1663 aa18.73■□□□□ 0.59
TREX1-203ENST00000456089 BTG4Q9NY30 223 aa18.72■□□□□ 0.59
TREX1-203ENST00000456089 NUTM2GQ5VZR2 741 aa18.71■□□□□ 0.59
TREX1-203ENST00000456089 A0A0G2JS52 829 aa18.69■□□□□ 0.58
TREX1-203ENST00000456089 MYT1Q01538 1121 aa18.69■□□□□ 0.58
TREX1-203ENST00000456089 TRIM26Q12899 539 aaPredicted RBP18.68■□□□□ 0.58
TREX1-203ENST00000456089 SIN3AQ96ST3 1273 aa18.68■□□□□ 0.58
TREX1-203ENST00000456089 ACEP12821 1306 aa18.68■□□□□ 0.58
TREX1-203ENST00000456089 FAM98CQ17RN3 349 aaKnown RBP18.67■□□□□ 0.58
TREX1-203ENST00000456089 TRPM1Q7Z4N2 1603 aa18.67■□□□□ 0.58
TREX1-203ENST00000456089 CHRNA2Q15822 529 aa18.66■□□□□ 0.58
TREX1-203ENST00000456089 L3MBTL2Q969R5 705 aa18.66■□□□□ 0.58
TREX1-203ENST00000456089 DEFB132Q7Z7B7 95 aa18.65■□□□□ 0.58
TREX1-203ENST00000456089 PRDM11Q9NQV5 511 aa18.65■□□□□ 0.58
TREX1-203ENST00000456089 POLR3AO14802 1390 aaPredicted RBP18.65■□□□□ 0.58
TREX1-203ENST00000456089 KIAA0232Q92628 1395 aa18.65■□□□□ 0.58
TREX1-203ENST00000456089 BLMP54132 1417 aaPredicted RBP18.65■□□□□ 0.58
TREX1-203ENST00000456089 ONECUT3O60422 494 aaPredicted RBP18.64■□□□□ 0.57
TREX1-203ENST00000456089 SRPK2P78362 688 aaKnown RBP18.64■□□□□ 0.57
TREX1-203ENST00000456089 NEUROD1Q13562 356 aa18.64■□□□□ 0.57
TREX1-203ENST00000456089 NBPF8Q3BBV2 869 aa18.64■□□□□ 0.57
TREX1-203ENST00000456089 KRT27Q7Z3Y8 459 aa18.64■□□□□ 0.57
TREX1-203ENST00000456089 CABP2Q9NPB3 220 aa18.64■□□□□ 0.57
TREX1-203ENST00000456089 CENPJQ9HC77 1338 aaPredicted RBP18.64■□□□□ 0.57
TREX1-203ENST00000456089 ZC3H6P61129 1189 aaKnown RBP18.63■□□□□ 0.57
TREX1-203ENST00000456089 FAM182BQ5T319 152 aa18.63■□□□□ 0.57
TREX1-203ENST00000456089 CCDC125Q86Z20 511 aa18.63■□□□□ 0.57
TREX1-203ENST00000456089 CCDC61Q9Y6R9 512 aa18.63■□□□□ 0.57
TREX1-203ENST00000456089 NRKQ7Z2Y5 1582 aa18.63■□□□□ 0.57
TREX1-203ENST00000456089 ZRANB1Q9UGI0 708 aa18.62■□□□□ 0.57
TREX1-203ENST00000456089 PPIP5K1Q6PFW1 1433 aa18.62■□□□□ 0.57
TREX1-203ENST00000456089 THSD7AQ9UPZ6 1657 aa18.62■□□□□ 0.57
TREX1-203ENST00000456089 SPATA31A5Q5VU36 1347 aa18.61■□□□□ 0.57
TREX1-203ENST00000456089 SPATA31A7Q8IWB4 1347 aa18.61■□□□□ 0.57
TREX1-203ENST00000456089 PLEKHG3A1L390 1219 aa18.61■□□□□ 0.57
TREX1-203ENST00000456089 STRN4Q9NRL3 753 aa18.61■□□□□ 0.57
TREX1-203ENST00000456089 ABTB2Q8N961 1025 aa18.59■□□□□ 0.57
TREX1-203ENST00000456089 SRCAPQ6ZRS2 3230 aa18.59■□□□□ 0.57
TREX1-203ENST00000456089 SF3B2Q13435 895 aaKnown RBP18.58■□□□□ 0.56
TREX1-203ENST00000456089 RGPD1P0DJD0 1748 aa18.57■□□□□ 0.56
TREX1-203ENST00000456089 LMO7Q8WWI1 1683 aa18.57■□□□□ 0.56
TREX1-203ENST00000456089 USP35Q9P2H5 1018 aa18.56■□□□□ 0.56
TREX1-203ENST00000456089 TNS1Q9HBL0 1735 aaKnown RBP18.56■□□□□ 0.56
TREX1-203ENST00000456089 CAMTA1Q9Y6Y1 1673 aa18.56■□□□□ 0.56
TREX1-203ENST00000456089 SPATA31A1Q5TZJ5 1347 aa18.55■□□□□ 0.56
TREX1-203ENST00000456089 CABP1Q9NZU7 370 aa18.55■□□□□ 0.56
TREX1-203ENST00000456089 PIK3C2AO00443 1686 aa18.54■□□□□ 0.56
TREX1-203ENST00000456089 AKAP12Q02952 1782 aa18.54■□□□□ 0.56
TREX1-203ENST00000456089 ROCK2O75116 1388 aaKnown RBP18.54■□□□□ 0.56
TREX1-203ENST00000456089 USP19O94966 1318 aa18.53■□□□□ 0.56
TREX1-203ENST00000456089 ZBTB7CA1YPR0 619 aa18.53■□□□□ 0.56
TREX1-203ENST00000456089 SSH2Q76I76 1423 aa18.52■□□□□ 0.56
TREX1-203ENST00000456089 EVA1CP58658 441 aa18.52■□□□□ 0.56
TREX1-203ENST00000456089 RGPD5Q99666 1765 aa18.52■□□□□ 0.55
TREX1-203ENST00000456089 USP6P35125 1406 aa18.51■□□□□ 0.55
TREX1-203ENST00000456089 LARP1Q6PKG0 1096 aaKnown RBP18.51■□□□□ 0.55
TREX1-203ENST00000456089 GCP02774 474 aa18.5■□□□□ 0.55
TREX1-203ENST00000456089 NLRP13Q86W25 1043 aa18.5■□□□□ 0.55
TREX1-203ENST00000456089 EVC2Q86UK5 1308 aa18.49■□□□□ 0.55
TREX1-203ENST00000456089 EN1Q05925 392 aaPredicted RBP18.49■□□□□ 0.55
TREX1-203ENST00000456089 CPDO75976 1380 aa18.49■□□□□ 0.55
TREX1-203ENST00000456089 BAG6P46379 1132 aa18.48■□□□□ 0.55
TREX1-203ENST00000456089 NLRP6P59044 892 aa18.48■□□□□ 0.55
TREX1-203ENST00000456089 SLIT3O75094 1523 aa18.48■□□□□ 0.55
TREX1-203ENST00000456089 COL18A1P39060 1754 aa18.47■□□□□ 0.55
TREX1-203ENST00000456089 PSDA5PKW4 1024 aaPredicted RBP18.47■□□□□ 0.55
TREX1-203ENST00000456089 COL5A2P05997 1499 aaPredicted RBP18.46■□□□□ 0.55
TREX1-203ENST00000456089 TRIM37O94972 964 aa18.45■□□□□ 0.54
TREX1-203ENST00000456089 MON2Q7Z3U7 1717 aa18.45■□□□□ 0.54
TREX1-203ENST00000456089 PARP4Q9UKK3 1724 aaKnown RBP18.45■□□□□ 0.54
TREX1-203ENST00000456089 WNK3Q9BYP7 1800 aa18.44■□□□□ 0.54
TREX1-203ENST00000456089 SOX12O15370 315 aa18.44■□□□□ 0.54
TREX1-203ENST00000456089 BRD4O60885 1362 aaPredicted RBP18.43■□□□□ 0.54
TREX1-203ENST00000456089 TCP11L2Q8N4U5 519 aa18.43■□□□□ 0.54
TREX1-203ENST00000456089 EZH2Q15910 746 aaKnown RBP18.42■□□□□ 0.54
TREX1-203ENST00000456089 BARGINQ6ZT62 677 aa18.42■□□□□ 0.54
TREX1-203ENST00000456089 TTC21BQ7Z4L5 1316 aa18.42■□□□□ 0.54
TREX1-203ENST00000456089 PDE3BQ13370 1112 aa18.41■□□□□ 0.54
TREX1-203ENST00000456089 FAM196AQ6ZSG2 479 aa18.41■□□□□ 0.54
TREX1-203ENST00000456089 SBF2Q86WG5 1849 aa18.41■□□□□ 0.54
TREX1-203ENST00000456089 LRRC37A3O60309 1634 aa18.41■□□□□ 0.54
TREX1-203ENST00000456089 CARD11Q9BXL7 1154 aa18.4■□□□□ 0.54
TREX1-203ENST00000456089 LRP5O75197 1615 aa18.4■□□□□ 0.54
TREX1-203ENST00000456089 RREB1Q92766 1687 aa18.4■□□□□ 0.54
TREX1-203ENST00000456089 CRB1P82279 1406 aa18.4■□□□□ 0.54
TREX1-203ENST00000456089 AXIN2Q9Y2T1 843 aa18.39■□□□□ 0.53
TREX1-203ENST00000456089 AATKQ6ZMQ8 1374 aa18.39■□□□□ 0.53
TREX1-203ENST00000456089 KTN1Q86UP2 1357 aaKnown RBP18.39■□□□□ 0.53
TREX1-203ENST00000456089 DISP2A7MBM2 1401 aa18.39■□□□□ 0.53
TREX1-203ENST00000456089 CPSF1Q10570 1443 aaKnown RBP18.39■□□□□ 0.53
TREX1-203ENST00000456089 NUP188Q5SRE5 1749 aa18.38■□□□□ 0.53
TREX1-203ENST00000456089 APBA3O96018 575 aa18.38■□□□□ 0.53
TREX1-203ENST00000456089 R3HDM1Q15032 1099 aaKnown RBP18.38■□□□□ 0.53
TREX1-203ENST00000456089 TONSLQ96HA7 1378 aa18.38■□□□□ 0.53
TREX1-203ENST00000456089 PEAK1Q9H792 1746 aa18.37■□□□□ 0.53
TREX1-203ENST00000456089 LTN1O94822 1766 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms