RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 ANTXR1Q9H6X2 564 aa16.33■□□□□ 0.2
LINC00473-202ENST00000455853 C14orf93Q9H972 538 aaKnown RBP16.33■□□□□ 0.2
LINC00473-202ENST00000455853 RSPH6AQ9H0K4 717 aa16.32■□□□□ 0.2
LINC00473-202ENST00000455853 PDZRN3Q9UPQ7 1066 aa16.32■□□□□ 0.2
LINC00473-202ENST00000455853 ZNF335Q9H4Z2 1342 aaPredicted RBP16.32■□□□□ 0.2
LINC00473-202ENST00000455853 MVPQ14764 893 aaKnown RBP16.31■□□□□ 0.2
LINC00473-202ENST00000455853 ZKSCAN2Q63HK3 967 aa16.31■□□□□ 0.2
LINC00473-202ENST00000455853 ANKLE2Q86XL3 938 aa16.31■□□□□ 0.2
LINC00473-202ENST00000455853 ANKRD36BQ8N2N9 1353 aa16.31■□□□□ 0.2
LINC00473-202ENST00000455853 SEC24BO95487 1268 aa16.3■□□□□ 0.2
LINC00473-202ENST00000455853 PCDHB15Q9Y5E8 787 aa16.3■□□□□ 0.2
LINC00473-202ENST00000455853 ARHGEF28Q8N1W1 1705 aaKnown RBP16.3■□□□□ 0.2
LINC00473-202ENST00000455853 ANKRD26Q9UPS8 1709 aa16.3■□□□□ 0.2
LINC00473-202ENST00000455853 ABCC11Q96J66 1382 aa16.29■□□□□ 0.2
LINC00473-202ENST00000455853 LTBP4Q8N2S1 1624 aa16.29■□□□□ 0.2
LINC00473-202ENST00000455853 IL16Q14005 1332 aa16.28■□□□□ 0.2
LINC00473-202ENST00000455853 HDAC1Q13547 482 aaPredicted RBP16.28■□□□□ 0.2
LINC00473-202ENST00000455853 EVC2Q86UK5 1308 aa16.28■□□□□ 0.2
LINC00473-202ENST00000455853 IDI1Q13907 227 aa16.27■□□□□ 0.2
LINC00473-202ENST00000455853 DZIP1LQ8IYY4 767 aaKnown RBP16.27■□□□□ 0.2
LINC00473-202ENST00000455853 CFAP65Q6ZU64 1925 aaKnown RBP16.27■□□□□ 0.2
LINC00473-202ENST00000455853 RLBP1P12271 317 aa16.26■□□□□ 0.19
LINC00473-202ENST00000455853 MTHFSP49914 203 aa16.26■□□□□ 0.19
LINC00473-202ENST00000455853 FTSJ3Q8IY81 847 aaKnown RBP16.26■□□□□ 0.19
LINC00473-202ENST00000455853 TBC1D2Q9BYX2 928 aa16.26■□□□□ 0.19
LINC00473-202ENST00000455853 CHMP5Q9NZZ3 219 aa16.26■□□□□ 0.19
LINC00473-202ENST00000455853 DDX19BQ9UMR2 479 aa16.26■□□□□ 0.19
LINC00473-202ENST00000455853 PIK3C2BO00750 1634 aa16.25■□□□□ 0.19
LINC00473-202ENST00000455853 SLKQ9H2G2 1235 aaPredicted RBP16.25■□□□□ 0.19
LINC00473-202ENST00000455853 ISY1Q9ULR0 285 aaKnown RBP16.25■□□□□ 0.19
LINC00473-202ENST00000455853 MED14O60244 1454 aa16.24■□□□□ 0.19
LINC00473-202ENST00000455853 NEUROD2Q15784 382 aa16.24■□□□□ 0.19
LINC00473-202ENST00000455853 SLC12A5Q9H2X9 1139 aa16.24■□□□□ 0.19
LINC00473-202ENST00000455853 PNNQ9H307 717 aaKnown RBP16.24■□□□□ 0.19
LINC00473-202ENST00000455853 POGKQ9P215 609 aa16.24■□□□□ 0.19
LINC00473-202ENST00000455853 NPHP4O75161 1426 aaPredicted RBP16.24■□□□□ 0.19
LINC00473-202ENST00000455853 TULP4Q9NRJ4 1543 aa16.23■□□□□ 0.19
LINC00473-202ENST00000455853 PRKCSHP14314 528 aaPredicted RBP16.23■□□□□ 0.19
LINC00473-202ENST00000455853 LTKP29376 864 aa16.23■□□□□ 0.19
LINC00473-202ENST00000455853 STAG3Q9UJ98 1225 aa16.23■□□□□ 0.19
LINC00473-202ENST00000455853 TRAK1Q9UPV9 953 aa16.23■□□□□ 0.19
LINC00473-202ENST00000455853 RRP7AQ9Y3A4 280 aaKnown RBP16.23■□□□□ 0.19
LINC00473-202ENST00000455853 UBR1Q8IWV7 1749 aa16.22■□□□□ 0.19
LINC00473-202ENST00000455853 C22orf23Q9BZE7 217 aa16.22■□□□□ 0.19
LINC00473-202ENST00000455853 PTMSP20962 102 aa16.22■□□□□ 0.19
LINC00473-202ENST00000455853 MCM4P33991 863 aa16.22■□□□□ 0.19
LINC00473-202ENST00000455853 TXNDC2Q86VQ3 553 aa16.22■□□□□ 0.19
LINC00473-202ENST00000455853 GOLGA6L3A6NEY3 463 aa16.21■□□□□ 0.19
LINC00473-202ENST00000455853 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
LINC00473-202ENST00000455853 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
LINC00473-202ENST00000455853 CHMP4BQ9H444 224 aaKnown RBP16.21■□□□□ 0.19
LINC00473-202ENST00000455853 ARHGAP23Q9P227 1491 aa16.2■□□□□ 0.18
LINC00473-202ENST00000455853 KIF16BQ96L93 1317 aa16.2■□□□□ 0.18
LINC00473-202ENST00000455853 IPO8O15397 1037 aaKnown RBP16.2■□□□□ 0.18
LINC00473-202ENST00000455853 ZFYVE9O95405 1425 aa16.2■□□□□ 0.18
LINC00473-202ENST00000455853 FSD2A1L4K1 749 aa16.19■□□□□ 0.18
LINC00473-202ENST00000455853 DDX11L8A8MPP1 907 aa16.19■□□□□ 0.18
LINC00473-202ENST00000455853 EIF5BO60841 1220 aaKnown RBP16.19■□□□□ 0.18
LINC00473-202ENST00000455853 SMC5Q8IY18 1101 aa16.19■□□□□ 0.18
LINC00473-202ENST00000455853 ZNF428Q96B54 188 aa16.19■□□□□ 0.18
LINC00473-202ENST00000455853 SLC52A1Q9NWF4 448 aa16.19■□□□□ 0.18
LINC00473-202ENST00000455853 COL3A1P02461 1466 aaPredicted RBP16.19■□□□□ 0.18
LINC00473-202ENST00000455853 TMEM2Q9UHN6 1383 aa16.19■□□□□ 0.18
LINC00473-202ENST00000455853 VGFO15240 615 aaPredicted RBP16.19■□□□□ 0.18
LINC00473-202ENST00000455853 TNNT2P45379 298 aaPredicted RBP16.19■□□□□ 0.18
LINC00473-202ENST00000455853 ATF7IPQ6VMQ6 1270 aa16.19■□□□□ 0.18
LINC00473-202ENST00000455853 HSCBQ8IWL3 235 aa16.19■□□□□ 0.18
LINC00473-202ENST00000455853 SMC4Q9NTJ3 1288 aa16.19■□□□□ 0.18
LINC00473-202ENST00000455853 SLIT1O75093 1534 aa16.19■□□□□ 0.18
LINC00473-202ENST00000455853 NEXMIFQ5QGS0 1516 aa16.19■□□□□ 0.18
LINC00473-202ENST00000455853 NCOA3Q9Y6Q9 1424 aa16.18■□□□□ 0.18
LINC00473-202ENST00000455853 CDC42BPGQ6DT37 1551 aa16.18■□□□□ 0.18
LINC00473-202ENST00000455853 CHGAP10645 457 aaKnown RBP16.17■□□□□ 0.18
LINC00473-202ENST00000455853 ALDH1L2Q3SY69 923 aa16.17■□□□□ 0.18
LINC00473-202ENST00000455853 SNX21Q969T3 373 aa16.17■□□□□ 0.18
LINC00473-202ENST00000455853 CIZ1Q9ULV3 898 aaPredicted RBP16.17■□□□□ 0.18
LINC00473-202ENST00000455853 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
LINC00473-202ENST00000455853 TNNQ9UQP3 1299 aa16.17■□□□□ 0.18
LINC00473-202ENST00000455853 EID1Q9Y6B2 187 aa16.17■□□□□ 0.18
LINC00473-202ENST00000455853 ATAD2Q6PL18 1390 aa16.16■□□□□ 0.18
LINC00473-202ENST00000455853 TMPOP42166 694 aaKnown RBP16.16■□□□□ 0.18
LINC00473-202ENST00000455853 PLEKHF1Q96S99 279 aa16.16■□□□□ 0.18
LINC00473-202ENST00000455853 RBM25P49756 843 aaKnown RBP16.15■□□□□ 0.18
LINC00473-202ENST00000455853 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.15■□□□□ 0.18
LINC00473-202ENST00000455853 KIF20BQ96Q89 1820 aa16.15■□□□□ 0.18
LINC00473-202ENST00000455853 TRIM27P14373 513 aa16.15■□□□□ 0.18
LINC00473-202ENST00000455853 MRE11P49959 708 aa16.15■□□□□ 0.18
LINC00473-202ENST00000455853 BRPF1P55201 1214 aaPredicted RBP16.15■□□□□ 0.18
LINC00473-202ENST00000455853 EXOSC9Q06265 439 aaKnown RBP16.14■□□□□ 0.17
LINC00473-202ENST00000455853 MFAP1P55081 439 aaKnown RBP16.13■□□□□ 0.17
LINC00473-202ENST00000455853 ITPRIPQ8IWB1 547 aa16.13■□□□□ 0.17
LINC00473-202ENST00000455853 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
LINC00473-202ENST00000455853 PPIP5K1Q6PFW1 1433 aa16.13■□□□□ 0.17
LINC00473-202ENST00000455853 TRAK2O60296 914 aa16.12■□□□□ 0.17
LINC00473-202ENST00000455853 SSH1Q8WYL5 1049 aa16.12■□□□□ 0.17
LINC00473-202ENST00000455853 CFAP44Q96MT7 982 aa16.12■□□□□ 0.17
LINC00473-202ENST00000455853 ZBTB40Q9NUA8 1239 aa16.12■□□□□ 0.17
LINC00473-202ENST00000455853 TERF2IPQ9NYB0 399 aa16.12■□□□□ 0.17
LINC00473-202ENST00000455853 NUCB1Q02818 461 aa16.12■□□□□ 0.17
LINC00473-202ENST00000455853 SKOR2Q2VWA4 1001 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms