RNA–Protein interactions for RNA: ENST00000455371.5

PITRM1-208, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 2

Gene PITRM1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-208ENST00000455371 KRT28Q7Z3Y7 464 aa10.94□□□□□ -0.66
PITRM1-208ENST00000455371 NUDT16Q96DE0 195 aaKnown RBP10.94□□□□□ -0.66
PITRM1-208ENST00000455371 C8orf37Q96NL8 207 aa10.94□□□□□ -0.66
PITRM1-208ENST00000455371 LTN1O94822 1766 aa10.94□□□□□ -0.66
PITRM1-208ENST00000455371 KIF20BQ96Q89 1820 aa10.93□□□□□ -0.66
PITRM1-208ENST00000455371 SLIT2O94813 1529 aa10.93□□□□□ -0.66
PITRM1-208ENST00000455371 BCL9LQ86UU0 1499 aa10.93□□□□□ -0.66
PITRM1-208ENST00000455371 COL18A1P39060 1754 aa10.93□□□□□ -0.66
PITRM1-208ENST00000455371 USP6P35125 1406 aa10.92□□□□□ -0.66
PITRM1-208ENST00000455371 SBNO2Q9Y2G9 1366 aa10.92□□□□□ -0.66
PITRM1-208ENST00000455371 CARD11Q9BXL7 1154 aa10.92□□□□□ -0.66
PITRM1-208ENST00000455371 SLIT3O75094 1523 aa10.92□□□□□ -0.66
PITRM1-208ENST00000455371 ATRNO75882 1429 aa10.92□□□□□ -0.66
PITRM1-208ENST00000455371 ACEP12821 1306 aa10.91□□□□□ -0.66
PITRM1-208ENST00000455371 SSH2Q76I76 1423 aa10.91□□□□□ -0.66
PITRM1-208ENST00000455371 ARHGEF10O15013 1369 aa10.9□□□□□ -0.66
PITRM1-208ENST00000455371 USP47Q96K76 1375 aa10.9□□□□□ -0.66
PITRM1-208ENST00000455371 SRPK2P78362 688 aaKnown RBP10.9□□□□□ -0.66
PITRM1-208ENST00000455371 NFAT5O94916 1531 aa10.89□□□□□ -0.67
PITRM1-208ENST00000455371 NUTM2GQ5VZR2 741 aa10.89□□□□□ -0.67
PITRM1-208ENST00000455371 LMOD2Q6P5Q4 547 aa10.89□□□□□ -0.67
PITRM1-208ENST00000455371 NGDNQ8NEJ9 315 aaKnown RBP10.89□□□□□ -0.67
PITRM1-208ENST00000455371 THSD7AQ9UPZ6 1657 aa10.89□□□□□ -0.67
PITRM1-208ENST00000455371 SOCS7O14512 581 aa10.88□□□□□ -0.67
PITRM1-208ENST00000455371 PSME1Q06323 249 aa10.88□□□□□ -0.67
PITRM1-208ENST00000455371 CPSF1Q10570 1443 aaKnown RBP10.88□□□□□ -0.67
PITRM1-208ENST00000455371 TESK2Q96S53 571 aa10.88□□□□□ -0.67
PITRM1-208ENST00000455371 CCER1Q8TC90 406 aaPredicted RBP10.87□□□□□ -0.67
PITRM1-208ENST00000455371 CCDC61Q9Y6R9 512 aa10.87□□□□□ -0.67
PITRM1-208ENST00000455371 CDK12Q9NYV4 1490 aaPredicted RBP10.87□□□□□ -0.67
PITRM1-208ENST00000455371 EVC2Q86UK5 1308 aa10.86□□□□□ -0.67
PITRM1-208ENST00000455371 CAMTA1Q9Y6Y1 1673 aa10.86□□□□□ -0.67
PITRM1-208ENST00000455371 RGPD2P0DJD1 1756 aa10.86□□□□□ -0.67
PITRM1-208ENST00000455371 PLEKHG3A1L390 1219 aa10.86□□□□□ -0.67
PITRM1-208ENST00000455371 NGLY1Q96IV0 654 aa10.86□□□□□ -0.67
PITRM1-208ENST00000455371 CABP1Q9NZU7 370 aa10.86□□□□□ -0.67
PITRM1-208ENST00000455371 USP19O94966 1318 aa10.85□□□□□ -0.67
PITRM1-208ENST00000455371 CLSPNQ9HAW4 1339 aa10.85□□□□□ -0.67
PITRM1-208ENST00000455371 ANKRD26Q9UPS8 1709 aa10.85□□□□□ -0.67
PITRM1-208ENST00000455371 ST20-MTHFSA0A0A6YYL1 179 aa10.85□□□□□ -0.67
PITRM1-208ENST00000455371 PAK3O75914 559 aaPredicted RBP10.85□□□□□ -0.67
PITRM1-208ENST00000455371 A0A1W2PP64 1363 aa10.85□□□□□ -0.67
PITRM1-208ENST00000455371 ATAD2Q6PL18 1390 aa10.85□□□□□ -0.67
PITRM1-208ENST00000455371 KIAA0232Q92628 1395 aa10.85□□□□□ -0.67
PITRM1-208ENST00000455371 LRRC37A3O60309 1634 aa10.84□□□□□ -0.67
PITRM1-208ENST00000455371 FNBP4Q8N3X1 1017 aaPredicted RBP10.84□□□□□ -0.67
PITRM1-208ENST00000455371 USP21Q9UK80 565 aa10.84□□□□□ -0.67
PITRM1-208ENST00000455371 TNS1Q9HBL0 1735 aaKnown RBP10.84□□□□□ -0.67
PITRM1-208ENST00000455371 EP400Q96L91 3159 aa10.83□□□□□ -0.68
PITRM1-208ENST00000455371 ZNF772Q68DY9 489 aaPredicted RBP10.83□□□□□ -0.68
PITRM1-208ENST00000455371 ZRANB1Q9UGI0 708 aa10.83□□□□□ -0.68
PITRM1-208ENST00000455371 PEAK1Q9H792 1746 aa10.83□□□□□ -0.68
PITRM1-208ENST00000455371 CHRNA2Q15822 529 aa10.82□□□□□ -0.68
PITRM1-208ENST00000455371 OVOS2A0A0J9YW53 1432 aa10.82□□□□□ -0.68
PITRM1-208ENST00000455371 OVOS2Q6IE36 1432 aa10.82□□□□□ -0.68
PITRM1-208ENST00000455371 PARP4Q9UKK3 1724 aaKnown RBP10.81□□□□□ -0.68
PITRM1-208ENST00000455371 KTN1Q86UP2 1357 aaKnown RBP10.81□□□□□ -0.68
PITRM1-208ENST00000455371 FAM83GA6ND36 823 aa10.81□□□□□ -0.68
PITRM1-208ENST00000455371 HAP1P54257 671 aaPredicted RBP10.81□□□□□ -0.68
PITRM1-208ENST00000455371 COL5A2P05997 1499 aaPredicted RBP10.81□□□□□ -0.68
PITRM1-208ENST00000455371 ZC3H6P61129 1189 aaKnown RBP10.8□□□□□ -0.68
PITRM1-208ENST00000455371 QTRT2Q9H974 415 aaKnown RBP10.8□□□□□ -0.68
PITRM1-208ENST00000455371 TTC21BQ7Z4L5 1316 aa10.8□□□□□ -0.68
PITRM1-208ENST00000455371 SHANK3Q9BYB0 1731 aa10.79□□□□□ -0.68
PITRM1-208ENST00000455371 EDC4Q6P2E9 1401 aaKnown RBP10.79□□□□□ -0.68
PITRM1-208ENST00000455371 RXRBP28702 533 aa10.79□□□□□ -0.68
PITRM1-208ENST00000455371 SLC12A5Q9H2X9 1139 aa10.79□□□□□ -0.68
PITRM1-208ENST00000455371 FAM208AQ9UK61 1670 aaKnown RBP10.79□□□□□ -0.68
PITRM1-208ENST00000455371 RBM6P78332 1123 aaKnown RBP10.78□□□□□ -0.68
PITRM1-208ENST00000455371 NME9Q86XW9 330 aa10.78□□□□□ -0.68
PITRM1-208ENST00000455371 POTEDQ86YR6 584 aa10.78□□□□□ -0.68
PITRM1-208ENST00000455371 UNC5CLQ8IV45 518 aa10.78□□□□□ -0.68
PITRM1-208ENST00000455371 ABTB2Q8N961 1025 aa10.78□□□□□ -0.68
PITRM1-208ENST00000455371 TRPC5Q9UL62 973 aaPredicted RBP10.78□□□□□ -0.68
PITRM1-208ENST00000455371 SBF2Q86WG5 1849 aa10.78□□□□□ -0.68
PITRM1-208ENST00000455371 CPDO75976 1380 aa10.77□□□□□ -0.68
PITRM1-208ENST00000455371 SOX12O15370 315 aa10.77□□□□□ -0.69
PITRM1-208ENST00000455371 PRDM11Q9NQV5 511 aa10.77□□□□□ -0.69
PITRM1-208ENST00000455371 BTG4Q9NY30 223 aa10.77□□□□□ -0.69
PITRM1-208ENST00000455371 RGPD1P0DJD0 1748 aa10.77□□□□□ -0.69
PITRM1-208ENST00000455371 ABCC6O95255 1503 aa10.77□□□□□ -0.69
PITRM1-208ENST00000455371 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.76□□□□□ -0.69
PITRM1-208ENST00000455371 TMC1Q8TDI8 760 aa10.76□□□□□ -0.69
PITRM1-208ENST00000455371 BRD4O60885 1362 aaPredicted RBP10.76□□□□□ -0.69
PITRM1-208ENST00000455371 ANKRD36BQ8N2N9 1353 aa10.76□□□□□ -0.69
PITRM1-208ENST00000455371 MAP2P11137 1827 aaKnown RBP10.75□□□□□ -0.69
PITRM1-208ENST00000455371 ZBTB7CA1YPR0 619 aa10.75□□□□□ -0.69
PITRM1-208ENST00000455371 HSPA5P11021 654 aaKnown RBP10.75□□□□□ -0.69
PITRM1-208ENST00000455371 NLRP6P59044 892 aa10.75□□□□□ -0.69
PITRM1-208ENST00000455371 GJD4Q96KN9 370 aaPredicted RBP10.75□□□□□ -0.69
PITRM1-208ENST00000455371 USP31Q70CQ4 1352 aa10.75□□□□□ -0.69
PITRM1-208ENST00000455371 GCP02774 474 aa10.74□□□□□ -0.69
PITRM1-208ENST00000455371 VPS72Q15906 364 aa10.74□□□□□ -0.69
PITRM1-208ENST00000455371 TIMELESSQ9UNS1 1208 aa10.74□□□□□ -0.69
PITRM1-208ENST00000455371 TTC21AQ8NDW8 1320 aa10.74□□□□□ -0.69
PITRM1-208ENST00000455371 NINLQ9Y2I6 1382 aa10.74□□□□□ -0.69
PITRM1-208ENST00000455371 NSD3Q9BZ95 1437 aa10.74□□□□□ -0.69
PITRM1-208ENST00000455371 STRN4Q9NRL3 753 aa10.73□□□□□ -0.69
PITRM1-208ENST00000455371 CCDC9Q9Y3X0 531 aaKnown RBP10.73□□□□□ -0.69
PITRM1-208ENST00000455371 SPATA31A5Q5VU36 1347 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms