RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ARHGEF5Q12774 1597 aa7.49□□□□□ -1.21
HMGB1P4-201ENST00000455362 PLEKHH2Q8IVE3 1493 aa7.49□□□□□ -1.21
HMGB1P4-201ENST00000455362 ROCK1Q13464 1354 aa7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 HFM1A2PYH4 1435 aa7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 TSPY4P0CV99 314 aa7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 TSPY10P0CW01 314 aa7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 GLI2P10070 1586 aa7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 HOXB1P14653 301 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 RFC5P40937 340 aa7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 PRIM1P49642 420 aaKnown RBP7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 FAM69CQ0P6D2 419 aa7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 NAIPQ13075 1403 aa7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 DIXDC1Q155Q3 683 aa7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 TMEM259Q4ZIN3 620 aa7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 KHSRPQ92945 711 aaKnown RBP eCLIP7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 GDPD2Q9HCC8 539 aa7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 ANO8Q9HCE9 1232 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 RRP7BPQ9NSQ0 103 aa7.48□□□□□ -1.21
HMGB1P4-201ENST00000455362 ARHGEF12Q9NZN5 1544 aa7.47□□□□□ -1.21
HMGB1P4-201ENST00000455362 RAB3GAP2Q9H2M9 1393 aa7.47□□□□□ -1.21
HMGB1P4-201ENST00000455362 NCOA1Q15788 1441 aa7.47□□□□□ -1.21
HMGB1P4-201ENST00000455362 POTEB3A0JP26 581 aa7.47□□□□□ -1.21
HMGB1P4-201ENST00000455362 ABL2P42684 1182 aa7.47□□□□□ -1.21
HMGB1P4-201ENST00000455362 CLK2P49760 499 aaKnown RBP7.47□□□□□ -1.21
HMGB1P4-201ENST00000455362 DOK7Q18PE1 504 aa7.47□□□□□ -1.21
HMGB1P4-201ENST00000455362 POTEBQ6S5H4 581 aa7.47□□□□□ -1.21
HMGB1P4-201ENST00000455362 CCER1Q8TC90 406 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P4-201ENST00000455362 ZSWIM6Q9HCJ5 1215 aa7.47□□□□□ -1.21
HMGB1P4-201ENST00000455362 FANCAO15360 1455 aa7.47□□□□□ -1.21
HMGB1P4-201ENST00000455362 ARSIQ5FYB1 569 aa7.46□□□□□ -1.22
HMGB1P4-201ENST00000455362 CERKQ8TCT0 537 aa7.46□□□□□ -1.22
HMGB1P4-201ENST00000455362 RBM33Q96EV2 1170 aaKnown RBP7.46□□□□□ -1.22
HMGB1P4-201ENST00000455362 CDHR5Q9HBB8 845 aa7.46□□□□□ -1.22
HMGB1P4-201ENST00000455362 PCDHGA4Q9Y5G9 962 aa7.46□□□□□ -1.22
HMGB1P4-201ENST00000455362 IVNS1ABPQ9Y6Y0 642 aa7.46□□□□□ -1.22
HMGB1P4-201ENST00000455362 CCDC141Q6ZP82 1450 aa7.46□□□□□ -1.22
HMGB1P4-201ENST00000455362 CROCC2H7BZ55 1655 aa7.46□□□□□ -1.22
HMGB1P4-201ENST00000455362 SYCP2Q9BX26 1530 aa7.46□□□□□ -1.22
HMGB1P4-201ENST00000455362 ANKRD30AQ9BXX3 1397 aa7.46□□□□□ -1.22
HMGB1P4-201ENST00000455362 MAP3K4Q9Y6R4 1608 aa7.45□□□□□ -1.22
HMGB1P4-201ENST00000455362 C9orf84Q5VXU9 1444 aa7.45□□□□□ -1.22
HMGB1P4-201ENST00000455362 ADGBQ8N7X0 1667 aa7.45□□□□□ -1.22
HMGB1P4-201ENST00000455362 ADGRL2O95490 1459 aa7.45□□□□□ -1.22
HMGB1P4-201ENST00000455362 SHANK2Q9UPX8 1470 aa7.45□□□□□ -1.22
HMGB1P4-201ENST00000455362 MYSM1Q5VVJ2 828 aa7.45□□□□□ -1.22
HMGB1P4-201ENST00000455362 TYW1BQ6NUM6 668 aa7.45□□□□□ -1.22
HMGB1P4-201ENST00000455362 AFAP1Q8N556 730 aa7.45□□□□□ -1.22
HMGB1P4-201ENST00000455362 NPDC1Q9NQX5 325 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P4-201ENST00000455362 ABCC1P33527 1531 aa7.45□□□□□ -1.22
HMGB1P4-201ENST00000455362 DIP2BQ9P265 1576 aa7.45□□□□□ -1.22
HMGB1P4-201ENST00000455362 SCAPERQ9BY12 1400 aa7.44□□□□□ -1.22
HMGB1P4-201ENST00000455362 TRAPPC8Q9Y2L5 1435 aa7.44□□□□□ -1.22
HMGB1P4-201ENST00000455362 RFX1P22670 979 aa7.44□□□□□ -1.22
HMGB1P4-201ENST00000455362 SND1Q7KZF4 910 aaKnown RBP eCLIP7.44□□□□□ -1.22
HMGB1P4-201ENST00000455362 FAM217BQ9NTX9 383 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P4-201ENST00000455362 GCC2Q8IWJ2 1684 aa7.44□□□□□ -1.22
HMGB1P4-201ENST00000455362 ADGRL1O94910 1474 aa7.43□□□□□ -1.22
HMGB1P4-201ENST00000455362 NEO1Q92859 1461 aa7.43□□□□□ -1.22
HMGB1P4-201ENST00000455362 KIF13AQ9H1H9 1805 aa7.43□□□□□ -1.22
HMGB1P4-201ENST00000455362 CFAP74Q9C0B2 1584 aa7.43□□□□□ -1.22
HMGB1P4-201ENST00000455362 MAST1Q9Y2H9 1570 aa7.43□□□□□ -1.22
HMGB1P4-201ENST00000455362 POM121CA8CG34 1229 aa7.43□□□□□ -1.22
HMGB1P4-201ENST00000455362 SPAG9O60271 1321 aaKnown RBP7.43□□□□□ -1.22
HMGB1P4-201ENST00000455362 DHX57Q6P158 1386 aaKnown RBP7.43□□□□□ -1.22
HMGB1P4-201ENST00000455362 TSPOAP1O95153 1857 aa7.43□□□□□ -1.22
HMGB1P4-201ENST00000455362 KDM6BO15054 1643 aa7.42□□□□□ -1.22
HMGB1P4-201ENST00000455362 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P4-201ENST00000455362 ZEB1P37275 1124 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P4-201ENST00000455362 METTL3Q86U44 580 aaKnown RBP7.42□□□□□ -1.22
HMGB1P4-201ENST00000455362 KIF15Q9NS87 1388 aa7.42□□□□□ -1.22
HMGB1P4-201ENST00000455362 RTEL1-TNFRSF6BF6WH68 1400 aa7.42□□□□□ -1.22
HMGB1P4-201ENST00000455362 MTMR14Q8NCE2 650 aa7.41□□□□□ -1.22
HMGB1P4-201ENST00000455362 MARVELD3Q96A59 401 aa7.41□□□□□ -1.22
HMGB1P4-201ENST00000455362 PHOX2BQ99453 314 aa7.41□□□□□ -1.22
HMGB1P4-201ENST00000455362 PCDHGA10Q9Y5H3 936 aa7.41□□□□□ -1.22
HMGB1P4-201ENST00000455362 PPRC1Q5VV67 1664 aaKnown RBP7.41□□□□□ -1.22
HMGB1P4-201ENST00000455362 RAPGEF3O95398 923 aa7.4□□□□□ -1.22
HMGB1P4-201ENST00000455362 TSR1Q2NL82 804 aaKnown RBP7.4□□□□□ -1.22
HMGB1P4-201ENST00000455362 TRIM52Q96A61 297 aa7.4□□□□□ -1.22
HMGB1P4-201ENST00000455362 CLSPNQ9HAW4 1339 aa7.4□□□□□ -1.22
HMGB1P4-201ENST00000455362 ANKRD50Q9ULJ7 1429 aa7.4□□□□□ -1.22
HMGB1P4-201ENST00000455362 PLXNC1O60486 1568 aa7.39□□□□□ -1.23
HMGB1P4-201ENST00000455362 DENND4BO75064 1496 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P4-201ENST00000455362 ZNF518AQ6AHZ1 1483 aa7.39□□□□□ -1.23
HMGB1P4-201ENST00000455362 TEX14Q8IWB6 1497 aa7.39□□□□□ -1.23
HMGB1P4-201ENST00000455362 POGZQ7Z3K3 1410 aa7.39□□□□□ -1.23
HMGB1P4-201ENST00000455362 EIF5BO60841 1220 aaKnown RBP7.39□□□□□ -1.23
HMGB1P4-201ENST00000455362 NUDT7P0C024 238 aa7.39□□□□□ -1.23
HMGB1P4-201ENST00000455362 ZNF710Q8N1W2 664 aa7.39□□□□□ -1.23
HMGB1P4-201ENST00000455362 RBM46Q8TBY0 533 aaKnown RBP7.39□□□□□ -1.23
HMGB1P4-201ENST00000455362 TBC1D2Q9BYX2 928 aa7.39□□□□□ -1.23
HMGB1P4-201ENST00000455362 HDGFL1Q5TGJ6 251 aa7.38□□□□□ -1.23
HMGB1P4-201ENST00000455362 PPP2R2DQ66LE6 453 aa7.38□□□□□ -1.23
HMGB1P4-201ENST00000455362 PXYLP1Q8TE99 480 aa7.38□□□□□ -1.23
HMGB1P4-201ENST00000455362 MPHOSPH9Q99550 1183 aa7.38□□□□□ -1.23
HMGB1P4-201ENST00000455362 VRTNQ9H8Y1 702 aa7.38□□□□□ -1.23
HMGB1P4-201ENST00000455362 RBM27Q9P2N5 1060 aaKnown RBP7.38□□□□□ -1.23
HMGB1P4-201ENST00000455362 TBC1D2BQ9UPU7 963 aa7.38□□□□□ -1.23
HMGB1P4-201ENST00000455362 KIDINS220Q9ULH0 1771 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms