RNA–Protein interactions for RNA: ENST00000455279.6

CCHCR1-209, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 676 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-209ENST00000455279 GLI3P10071 1580 aa29.19■■■□□ 2.26
CCHCR1-209ENST00000455279 POLR3AO14802 1390 aaPredicted RBP29.19■■■□□ 2.26
CCHCR1-209ENST00000455279 CCDC61Q9Y6R9 512 aa29.19■■■□□ 2.26
CCHCR1-209ENST00000455279 FAM83GA6ND36 823 aa29.18■■■□□ 2.26
CCHCR1-209ENST00000455279 SRPK2P78362 688 aaKnown RBP29.18■■■□□ 2.26
CCHCR1-209ENST00000455279 NUTM2GQ5VZR2 741 aa29.18■■■□□ 2.26
CCHCR1-209ENST00000455279 PLEKHG3A1L390 1219 aa29.17■■■□□ 2.26
CCHCR1-209ENST00000455279 UNC5CLQ8IV45 518 aa29.17■■■□□ 2.26
CCHCR1-209ENST00000455279 PPIP5K1Q6PFW1 1433 aa29.16■■■□□ 2.26
CCHCR1-209ENST00000455279 RALGAPBQ86X10 1494 aa29.15■■■□□ 2.26
CCHCR1-209ENST00000455279 GJD4Q96KN9 370 aaPredicted RBP29.14■■■□□ 2.26
CCHCR1-209ENST00000455279 TONSLQ96HA7 1378 aa29.13■■■□□ 2.25
CCHCR1-209ENST00000455279 NRAPQ86VF7 1730 aa29.11■■■□□ 2.25
CCHCR1-209ENST00000455279 PHRF1Q9P1Y6 1649 aaKnown RBP29.11■■■□□ 2.25
CCHCR1-209ENST00000455279 CABP1Q9NZU7 370 aa29.1■■■□□ 2.25
CCHCR1-209ENST00000455279 NWD2Q9ULI1 1742 aa29.1■■■□□ 2.25
CCHCR1-209ENST00000455279 CARD11Q9BXL7 1154 aa29.05■■■□□ 2.24
CCHCR1-209ENST00000455279 BTG4Q9NY30 223 aa29.05■■■□□ 2.24
CCHCR1-209ENST00000455279 COL14A1Q05707 1796 aaKnown RBP29.05■■■□□ 2.24
CCHCR1-209ENST00000455279 BRWD3Q6RI45 1802 aa29.04■■■□□ 2.24
CCHCR1-209ENST00000455279 EVC2Q86UK5 1308 aa29.04■■■□□ 2.24
CCHCR1-209ENST00000455279 VPS72Q15906 364 aa29.04■■■□□ 2.24
CCHCR1-209ENST00000455279 CHRNA2Q15822 529 aa29.03■■■□□ 2.24
CCHCR1-209ENST00000455279 KIAA0232Q92628 1395 aa29.02■■■□□ 2.24
CCHCR1-209ENST00000455279 NRKQ7Z2Y5 1582 aa29.02■■■□□ 2.24
CCHCR1-209ENST00000455279 ZC3H6P61129 1189 aaKnown RBP29.01■■■□□ 2.23
CCHCR1-209ENST00000455279 USP6P35125 1406 aa29.01■■■□□ 2.23
CCHCR1-209ENST00000455279 ABTB2Q8N961 1025 aa29■■■□□ 2.23
CCHCR1-209ENST00000455279 CCDC9Q9Y3X0 531 aaKnown RBP29■■■□□ 2.23
CCHCR1-209ENST00000455279 PRDM11Q9NQV5 511 aa28.99■■■□□ 2.23
CCHCR1-209ENST00000455279 SSH2Q76I76 1423 aa28.98■■■□□ 2.23
CCHCR1-209ENST00000455279 USP19O94966 1318 aa28.97■■■□□ 2.23
CCHCR1-209ENST00000455279 SEPT12Q8IYM1 358 aa28.96■■■□□ 2.23
CCHCR1-209ENST00000455279 ATAD2Q6PL18 1390 aa28.96■■■□□ 2.23
CCHCR1-209ENST00000455279 AKAP12Q02952 1782 aa28.96■■■□□ 2.23
CCHCR1-209ENST00000455279 PIK3C2AO00443 1686 aa28.95■■■□□ 2.22
CCHCR1-209ENST00000455279 PCGF6Q9BYE7 350 aa28.94■■■□□ 2.22
CCHCR1-209ENST00000455279 SBNO2Q9Y2G9 1366 aa28.92■■■□□ 2.22
CCHCR1-209ENST00000455279 FAM98CQ17RN3 349 aaKnown RBP28.91■■■□□ 2.22
CCHCR1-209ENST00000455279 ONECUT3O60422 494 aaPredicted RBP28.9■■■□□ 2.22
CCHCR1-209ENST00000455279 CAMTA1Q9Y6Y1 1673 aa28.89■■■□□ 2.22
CCHCR1-209ENST00000455279 CPSF1Q10570 1443 aaKnown RBP28.89■■■□□ 2.22
CCHCR1-209ENST00000455279 STRN4Q9NRL3 753 aa28.89■■■□□ 2.22
CCHCR1-209ENST00000455279 CD163L1Q9NR16 1453 aa28.89■■■□□ 2.22
CCHCR1-209ENST00000455279 LMO7Q8WWI1 1683 aa28.89■■■□□ 2.21
CCHCR1-209ENST00000455279 SPATA31A5Q5VU36 1347 aa28.89■■■□□ 2.21
CCHCR1-209ENST00000455279 SPATA31A7Q8IWB4 1347 aa28.89■■■□□ 2.21
CCHCR1-209ENST00000455279 EP400Q96L91 3159 aa28.88■■■□□ 2.21
CCHCR1-209ENST00000455279 GCP02774 474 aa28.88■■■□□ 2.21
CCHCR1-209ENST00000455279 NLRP13Q86W25 1043 aa28.88■■■□□ 2.21
CCHCR1-209ENST00000455279 TTC21BQ7Z4L5 1316 aa28.88■■■□□ 2.21
CCHCR1-209ENST00000455279 NLRP6P59044 892 aa28.87■■■□□ 2.21
CCHCR1-209ENST00000455279 SLIT3O75094 1523 aa28.86■■■□□ 2.21
CCHCR1-209ENST00000455279 TESK2Q96S53 571 aa28.86■■■□□ 2.21
CCHCR1-209ENST00000455279 ST20-MTHFSA0A0A6YYL1 179 aa28.85■■■□□ 2.21
CCHCR1-209ENST00000455279 ZRANB1Q9UGI0 708 aa28.85■■■□□ 2.21
CCHCR1-209ENST00000455279 BRD4O60885 1362 aaPredicted RBP28.85■■■□□ 2.21
CCHCR1-209ENST00000455279 CPDO75976 1380 aa28.85■■■□□ 2.21
CCHCR1-209ENST00000455279 MON2Q7Z3U7 1717 aa28.84■■■□□ 2.21
CCHCR1-209ENST00000455279 A0A0G2JS52 829 aa28.83■■■□□ 2.21
CCHCR1-209ENST00000455279 ZBTB7CA1YPR0 619 aa28.83■■■□□ 2.21
CCHCR1-209ENST00000455279 MYT1Q01538 1121 aa28.83■■■□□ 2.21
CCHCR1-209ENST00000455279 SLC12A5Q9H2X9 1139 aa28.83■■■□□ 2.21
CCHCR1-209ENST00000455279 THSD7AQ9UPZ6 1657 aa28.83■■■□□ 2.21
CCHCR1-209ENST00000455279 FAM182BQ5T319 152 aa28.82■■■□□ 2.2
CCHCR1-209ENST00000455279 SPATA31A1Q5TZJ5 1347 aa28.82■■■□□ 2.2
CCHCR1-209ENST00000455279 KTN1Q86UP2 1357 aaKnown RBP28.81■■■□□ 2.2
CCHCR1-209ENST00000455279 LARP1Q6PKG0 1096 aaKnown RBP28.81■■■□□ 2.2
CCHCR1-209ENST00000455279 KRT27Q7Z3Y8 459 aa28.8■■■□□ 2.2
CCHCR1-209ENST00000455279 TMC1Q8TDI8 760 aa28.79■■■□□ 2.2
CCHCR1-209ENST00000455279 ZNF692Q9BU19 519 aaPredicted RBP28.79■■■□□ 2.2
CCHCR1-209ENST00000455279 USP35Q9P2H5 1018 aa28.79■■■□□ 2.2
CCHCR1-209ENST00000455279 COL18A1P39060 1754 aa28.78■■■□□ 2.2
CCHCR1-209ENST00000455279 SOX12O15370 315 aa28.78■■■□□ 2.2
CCHCR1-209ENST00000455279 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.77■■■□□ 2.2
CCHCR1-209ENST00000455279 COL5A2P05997 1499 aaPredicted RBP28.76■■■□□ 2.19
CCHCR1-209ENST00000455279 NME9Q86XW9 330 aa28.75■■■□□ 2.19
CCHCR1-209ENST00000455279 USP47Q96K76 1375 aa28.75■■■□□ 2.19
CCHCR1-209ENST00000455279 EVA1CP58658 441 aa28.74■■■□□ 2.19
CCHCR1-209ENST00000455279 AXIN2Q9Y2T1 843 aa28.74■■■□□ 2.19
CCHCR1-209ENST00000455279 A0A1W2PP64 1363 aa28.74■■■□□ 2.19
CCHCR1-209ENST00000455279 TTC21AQ8NDW8 1320 aa28.73■■■□□ 2.19
CCHCR1-209ENST00000455279 DEFB132Q7Z7B7 95 aa28.73■■■□□ 2.19
CCHCR1-209ENST00000455279 NFAT5O94916 1531 aa28.73■■■□□ 2.19
CCHCR1-209ENST00000455279 RGPD5Q99666 1765 aa28.73■■■□□ 2.19
CCHCR1-209ENST00000455279 BLMP54132 1417 aaPredicted RBP28.71■■■□□ 2.19
CCHCR1-209ENST00000455279 AATKQ6ZMQ8 1374 aa28.7■■■□□ 2.18
CCHCR1-209ENST00000455279 ARHGEF25Q86VW2 580 aa28.69■■■□□ 2.18
CCHCR1-209ENST00000455279 USP54Q70EL1 1684 aa28.67■■■□□ 2.18
CCHCR1-209ENST00000455279 USP31Q70CQ4 1352 aa28.66■■■□□ 2.18
CCHCR1-209ENST00000455279 HDGFL2Q7Z4V5 671 aaPredicted RBP28.65■■■□□ 2.18
CCHCR1-209ENST00000455279 CCDC125Q86Z20 511 aa28.65■■■□□ 2.18
CCHCR1-209ENST00000455279 TCP11L2Q8N4U5 519 aa28.65■■■□□ 2.18
CCHCR1-209ENST00000455279 PUS7Q96PZ0 661 aaKnown RBP28.65■■■□□ 2.18
CCHCR1-209ENST00000455279 CLSPNQ9HAW4 1339 aa28.65■■■□□ 2.18
CCHCR1-209ENST00000455279 EDC4Q6P2E9 1401 aaKnown RBP28.64■■■□□ 2.18
CCHCR1-209ENST00000455279 BARGINQ6ZT62 677 aa28.64■■■□□ 2.18
CCHCR1-209ENST00000455279 CRB1P82279 1406 aa28.62■■■□□ 2.17
CCHCR1-209ENST00000455279 KCNH5Q8NCM2 988 aa28.61■■■□□ 2.17
CCHCR1-209ENST00000455279 CCER1Q8TC90 406 aaPredicted RBP28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms