RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 FNBP4Q8N3X1 1017 aaPredicted RBP25.02■■□□□ 1.6
COPS7A-202ENST00000455113 SBNO2Q9Y2G9 1366 aa25.02■■□□□ 1.6
COPS7A-202ENST00000455113 CABP1Q9NZU7 370 aa25.01■■□□□ 1.59
COPS7A-202ENST00000455113 ALS2Q96Q42 1657 aa25■■□□□ 1.59
COPS7A-202ENST00000455113 SLC24A1O60721 1099 aa25■■□□□ 1.59
COPS7A-202ENST00000455113 TRPC5Q9UL62 973 aaPredicted RBP25■■□□□ 1.59
COPS7A-202ENST00000455113 ATAD2Q6PL18 1390 aa24.99■■□□□ 1.59
COPS7A-202ENST00000455113 RBM6P78332 1123 aaKnown RBP24.98■■□□□ 1.59
COPS7A-202ENST00000455113 ABTB2Q8N961 1025 aa24.96■■□□□ 1.59
COPS7A-202ENST00000455113 BRD4O60885 1362 aaPredicted RBP24.95■■□□□ 1.59
COPS7A-202ENST00000455113 ABCA3Q99758 1704 aa24.94■■□□□ 1.58
COPS7A-202ENST00000455113 ZNF692Q9BU19 519 aaPredicted RBP24.94■■□□□ 1.58
COPS7A-202ENST00000455113 ST20-MTHFSA0A0A6YYL1 179 aa24.93■■□□□ 1.58
COPS7A-202ENST00000455113 NUTM2GQ5VZR2 741 aa24.92■■□□□ 1.58
COPS7A-202ENST00000455113 UNC5CLQ8IV45 518 aa24.92■■□□□ 1.58
COPS7A-202ENST00000455113 BCL9LQ86UU0 1499 aa24.9■■□□□ 1.58
COPS7A-202ENST00000455113 CDK12Q9NYV4 1490 aaPredicted RBP24.9■■□□□ 1.58
COPS7A-202ENST00000455113 NLRP13Q86W25 1043 aa24.9■■□□□ 1.58
COPS7A-202ENST00000455113 USP6P35125 1406 aa24.9■■□□□ 1.58
COPS7A-202ENST00000455113 USP47Q96K76 1375 aa24.89■■□□□ 1.58
COPS7A-202ENST00000455113 SLIT2O94813 1529 aa24.89■■□□□ 1.58
COPS7A-202ENST00000455113 TMC1Q8TDI8 760 aa24.89■■□□□ 1.57
COPS7A-202ENST00000455113 ATRNO75882 1429 aa24.88■■□□□ 1.57
COPS7A-202ENST00000455113 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.87■■□□□ 1.57
COPS7A-202ENST00000455113 FAM83GA6ND36 823 aa24.87■■□□□ 1.57
COPS7A-202ENST00000455113 PUS7Q96PZ0 661 aaKnown RBP24.87■■□□□ 1.57
COPS7A-202ENST00000455113 PRDM11Q9NQV5 511 aa24.87■■□□□ 1.57
COPS7A-202ENST00000455113 NWD2Q9ULI1 1742 aa24.86■■□□□ 1.57
COPS7A-202ENST00000455113 PLCH1Q4KWH8 1693 aa24.85■■□□□ 1.57
COPS7A-202ENST00000455113 GJD4Q96KN9 370 aaPredicted RBP24.85■■□□□ 1.57
COPS7A-202ENST00000455113 CCDC9Q9Y3X0 531 aaKnown RBP24.85■■□□□ 1.57
COPS7A-202ENST00000455113 CRYBG1Q9Y4K1 1723 aa24.85■■□□□ 1.57
COPS7A-202ENST00000455113 NLRP6P59044 892 aa24.84■■□□□ 1.57
COPS7A-202ENST00000455113 TMF1P82094 1093 aa24.84■■□□□ 1.57
COPS7A-202ENST00000455113 TESK2Q96S53 571 aa24.84■■□□□ 1.57
COPS7A-202ENST00000455113 KTN1Q86UP2 1357 aaKnown RBP24.84■■□□□ 1.57
COPS7A-202ENST00000455113 COL14A1Q05707 1796 aaKnown RBP24.84■■□□□ 1.57
COPS7A-202ENST00000455113 HDGFL2Q7Z4V5 671 aaPredicted RBP24.83■■□□□ 1.57
COPS7A-202ENST00000455113 BTG4Q9NY30 223 aa24.83■■□□□ 1.57
COPS7A-202ENST00000455113 PHRF1Q9P1Y6 1649 aaKnown RBP24.83■■□□□ 1.57
COPS7A-202ENST00000455113 AKAP12Q02952 1782 aa24.83■■□□□ 1.56
COPS7A-202ENST00000455113 ZC3H6P61129 1189 aaKnown RBP24.82■■□□□ 1.56
COPS7A-202ENST00000455113 TERF2IPQ9NYB0 399 aa24.81■■□□□ 1.56
COPS7A-202ENST00000455113 TTC21AQ8NDW8 1320 aa24.81■■□□□ 1.56
COPS7A-202ENST00000455113 RGS12O14924 1447 aa24.81■■□□□ 1.56
COPS7A-202ENST00000455113 CPSF1Q10570 1443 aaKnown RBP24.81■■□□□ 1.56
COPS7A-202ENST00000455113 KIAA0232Q92628 1395 aa24.8■■□□□ 1.56
COPS7A-202ENST00000455113 VPS72Q15906 364 aa24.8■■□□□ 1.56
COPS7A-202ENST00000455113 CDCA8Q53HL2 280 aa24.8■■□□□ 1.56
COPS7A-202ENST00000455113 TTC21BQ7Z4L5 1316 aa24.79■■□□□ 1.56
COPS7A-202ENST00000455113 SLC12A5Q9H2X9 1139 aa24.79■■□□□ 1.56
COPS7A-202ENST00000455113 NINLQ9Y2I6 1382 aa24.79■■□□□ 1.56
COPS7A-202ENST00000455113 USP19O94966 1318 aa24.79■■□□□ 1.56
COPS7A-202ENST00000455113 GCP02774 474 aa24.78■■□□□ 1.56
COPS7A-202ENST00000455113 SSH2Q76I76 1423 aa24.78■■□□□ 1.56
COPS7A-202ENST00000455113 CHRNA2Q15822 529 aa24.76■■□□□ 1.55
COPS7A-202ENST00000455113 NRKQ7Z2Y5 1582 aa24.75■■□□□ 1.55
COPS7A-202ENST00000455113 MON2Q7Z3U7 1717 aa24.75■■□□□ 1.55
COPS7A-202ENST00000455113 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.75■■□□□ 1.55
COPS7A-202ENST00000455113 KCNH5Q8NCM2 988 aa24.74■■□□□ 1.55
COPS7A-202ENST00000455113 PIK3C2AO00443 1686 aa24.74■■□□□ 1.55
COPS7A-202ENST00000455113 EVA1CP58658 441 aa24.73■■□□□ 1.55
COPS7A-202ENST00000455113 CPDO75976 1380 aa24.73■■□□□ 1.55
COPS7A-202ENST00000455113 NRAPQ86VF7 1730 aa24.72■■□□□ 1.55
COPS7A-202ENST00000455113 ZBTB7CA1YPR0 619 aa24.72■■□□□ 1.55
COPS7A-202ENST00000455113 STRN4Q9NRL3 753 aa24.72■■□□□ 1.55
COPS7A-202ENST00000455113 CD163L1Q9NR16 1453 aa24.71■■□□□ 1.55
COPS7A-202ENST00000455113 GLI3P10071 1580 aa24.71■■□□□ 1.55
COPS7A-202ENST00000455113 A0A0G2JS52 829 aa24.71■■□□□ 1.55
COPS7A-202ENST00000455113 EIF4G2P78344 907 aaKnown RBP eCLIP24.71■■□□□ 1.55
COPS7A-202ENST00000455113 MYT1Q01538 1121 aa24.71■■□□□ 1.55
COPS7A-202ENST00000455113 A0A1W2PP64 1363 aa24.71■■□□□ 1.55
COPS7A-202ENST00000455113 EDC4Q6P2E9 1401 aaKnown RBP24.7■■□□□ 1.54
COPS7A-202ENST00000455113 SLIT3O75094 1523 aa24.69■■□□□ 1.54
COPS7A-202ENST00000455113 SOX12O15370 315 aa24.67■■□□□ 1.54
COPS7A-202ENST00000455113 SEPT12Q8IYM1 358 aa24.66■■□□□ 1.54
COPS7A-202ENST00000455113 UPF1Q92900 1129 aaKnown RBP eCLIP24.66■■□□□ 1.54
COPS7A-202ENST00000455113 SPATA31A5Q5VU36 1347 aa24.65■■□□□ 1.54
COPS7A-202ENST00000455113 SPATA31A7Q8IWB4 1347 aa24.65■■□□□ 1.54
COPS7A-202ENST00000455113 NME9Q86XW9 330 aa24.65■■□□□ 1.54
COPS7A-202ENST00000455113 ANKRD36BQ8N2N9 1353 aa24.65■■□□□ 1.54
COPS7A-202ENST00000455113 ONECUT3O60422 494 aaPredicted RBP24.64■■□□□ 1.54
COPS7A-202ENST00000455113 FAM98CQ17RN3 349 aaKnown RBP24.64■■□□□ 1.54
COPS7A-202ENST00000455113 USP31Q70CQ4 1352 aa24.63■■□□□ 1.53
COPS7A-202ENST00000455113 AATKQ6ZMQ8 1374 aa24.63■■□□□ 1.53
COPS7A-202ENST00000455113 USP35Q9P2H5 1018 aa24.62■■□□□ 1.53
COPS7A-202ENST00000455113 CAMTA1Q9Y6Y1 1673 aa24.62■■□□□ 1.53
COPS7A-202ENST00000455113 LMO7Q8WWI1 1683 aa24.61■■□□□ 1.53
COPS7A-202ENST00000455113 SPATA31A1Q5TZJ5 1347 aa24.61■■□□□ 1.53
COPS7A-202ENST00000455113 HSPA5P11021 654 aaKnown RBP24.61■■□□□ 1.53
COPS7A-202ENST00000455113 POLR3GLQ9BT43 218 aa24.61■■□□□ 1.53
COPS7A-202ENST00000455113 ARHGEF25Q86VW2 580 aa24.6■■□□□ 1.53
COPS7A-202ENST00000455113 ZRANB1Q9UGI0 708 aa24.6■■□□□ 1.53
COPS7A-202ENST00000455113 LARP1Q6PKG0 1096 aaKnown RBP24.58■■□□□ 1.53
COPS7A-202ENST00000455113 KRT27Q7Z3Y8 459 aa24.58■■□□□ 1.53
COPS7A-202ENST00000455113 COG3Q96JB2 828 aa24.58■■□□□ 1.53
COPS7A-202ENST00000455113 USP54Q70EL1 1684 aa24.58■■□□□ 1.52
COPS7A-202ENST00000455113 COL5A2P05997 1499 aaPredicted RBP24.57■■□□□ 1.52
COPS7A-202ENST00000455113 BRWD3Q6RI45 1802 aa24.57■■□□□ 1.52
COPS7A-202ENST00000455113 TCP11L2Q8N4U5 519 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms