RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 TTC21BQ7Z4L5 1316 aa22.73■■□□□ 1.23
LINC00963-208ENST00000454968 TTC21AQ8NDW8 1320 aa22.73■■□□□ 1.23
LINC00963-208ENST00000454968 PIK3C2AO00443 1686 aa22.73■■□□□ 1.23
LINC00963-208ENST00000454968 NHSL1Q5SYE7 1610 aa22.72■■□□□ 1.23
LINC00963-208ENST00000454968 MARF1Q9Y4F3 1742 aaKnown RBP22.72■■□□□ 1.23
LINC00963-208ENST00000454968 USP31Q70CQ4 1352 aa22.7■■□□□ 1.22
LINC00963-208ENST00000454968 CCER2I3L3R5 266 aa22.7■■□□□ 1.22
LINC00963-208ENST00000454968 BRINP3Q76B58 766 aa22.7■■□□□ 1.22
LINC00963-208ENST00000454968 OVOS2A0A0J9YW53 1432 aa22.7■■□□□ 1.22
LINC00963-208ENST00000454968 OVOS2Q6IE36 1432 aa22.7■■□□□ 1.22
LINC00963-208ENST00000454968 ALS2Q96Q42 1657 aa22.69■■□□□ 1.22
LINC00963-208ENST00000454968 PXDNQ92626 1479 aa22.69■■□□□ 1.22
LINC00963-208ENST00000454968 CC2D1BQ5T0F9 858 aaKnown RBP22.69■■□□□ 1.22
LINC00963-208ENST00000454968 MYBBP1AQ9BQG0 1328 aaKnown RBP22.67■■□□□ 1.22
LINC00963-208ENST00000454968 FOXO3O43524 673 aa22.66■■□□□ 1.22
LINC00963-208ENST00000454968 NPHP3Q7Z494 1330 aa22.66■■□□□ 1.22
LINC00963-208ENST00000454968 SCAF1Q9H7N4 1312 aaKnown RBP22.66■■□□□ 1.22
LINC00963-208ENST00000454968 ROBO1Q9Y6N7 1651 aa22.65■■□□□ 1.22
LINC00963-208ENST00000454968 SBNO1A3KN83 1393 aa22.65■■□□□ 1.22
LINC00963-208ENST00000454968 NME9Q86XW9 330 aa22.65■■□□□ 1.22
LINC00963-208ENST00000454968 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.65■■□□□ 1.22
LINC00963-208ENST00000454968 AHDC1Q5TGY3 1603 aaPredicted RBP22.64■■□□□ 1.21
LINC00963-208ENST00000454968 GGNBP2Q9H3C7 697 aa22.64■■□□□ 1.21
LINC00963-208ENST00000454968 PSME1Q06323 249 aa22.63■■□□□ 1.21
LINC00963-208ENST00000454968 SOS2Q07890 1332 aaPredicted RBP22.63■■□□□ 1.21
LINC00963-208ENST00000454968 PPP2R1AP30153 589 aa22.61■■□□□ 1.21
LINC00963-208ENST00000454968 KRT28Q7Z3Y7 464 aa22.61■■□□□ 1.21
LINC00963-208ENST00000454968 AATKQ6ZMQ8 1374 aa22.61■■□□□ 1.21
LINC00963-208ENST00000454968 MORC1Q86VD1 984 aa22.6■■□□□ 1.21
LINC00963-208ENST00000454968 NLRP13Q86W25 1043 aa22.6■■□□□ 1.21
LINC00963-208ENST00000454968 MAP2P11137 1827 aaKnown RBP22.6■■□□□ 1.21
LINC00963-208ENST00000454968 CERKQ8TCT0 537 aa22.59■■□□□ 1.21
LINC00963-208ENST00000454968 CRYBG1Q9Y4K1 1723 aa22.58■■□□□ 1.21
LINC00963-208ENST00000454968 SMG6Q86US8 1419 aaKnown RBP22.58■■□□□ 1.21
LINC00963-208ENST00000454968 ZRANB1Q9UGI0 708 aa22.58■■□□□ 1.21
LINC00963-208ENST00000454968 MED1Q15648 1581 aaPredicted RBP22.58■■□□□ 1.2
LINC00963-208ENST00000454968 SLIT3O75094 1523 aa22.58■■□□□ 1.2
LINC00963-208ENST00000454968 TNS3Q68CZ2 1445 aa22.58■■□□□ 1.2
LINC00963-208ENST00000454968 TOM1O60784 492 aa22.57■■□□□ 1.2
LINC00963-208ENST00000454968 COG3Q96JB2 828 aa22.57■■□□□ 1.2
LINC00963-208ENST00000454968 SPATA31A3Q5VYP0 1347 aa22.55■■□□□ 1.2
LINC00963-208ENST00000454968 CCDC184Q52MB2 194 aa22.55■■□□□ 1.2
LINC00963-208ENST00000454968 DDX17Q92841 729 aaKnown RBP22.55■■□□□ 1.2
LINC00963-208ENST00000454968 USP19O94966 1318 aa22.54■■□□□ 1.2
LINC00963-208ENST00000454968 NFAT5O94916 1531 aa22.54■■□□□ 1.2
LINC00963-208ENST00000454968 CNGB1Q14028 1251 aaPredicted RBP22.54■■□□□ 1.2
LINC00963-208ENST00000454968 ABTB2Q8N961 1025 aa22.54■■□□□ 1.2
LINC00963-208ENST00000454968 PHRF1Q9P1Y6 1649 aaKnown RBP22.54■■□□□ 1.2
LINC00963-208ENST00000454968 XPCQ01831 940 aaPredicted RBP22.53■■□□□ 1.2
LINC00963-208ENST00000454968 INSRP06213 1382 aa22.53■■□□□ 1.2
LINC00963-208ENST00000454968 PNPLA6Q8IY17 1366 aa22.52■■□□□ 1.2
LINC00963-208ENST00000454968 COL16A1Q07092 1604 aaPredicted RBP22.51■■□□□ 1.19
LINC00963-208ENST00000454968 PAK3O75914 559 aaPredicted RBP22.51■■□□□ 1.19
LINC00963-208ENST00000454968 NLRP6P59044 892 aa22.51■■□□□ 1.19
LINC00963-208ENST00000454968 ARHGEF10O15013 1369 aa22.51■■□□□ 1.19
LINC00963-208ENST00000454968 COL3A1P02461 1466 aaPredicted RBP22.5■■□□□ 1.19
LINC00963-208ENST00000454968 CDK12Q9NYV4 1490 aaPredicted RBP22.49■■□□□ 1.19
LINC00963-208ENST00000454968 COL22A1Q8NFW1 1626 aaPredicted RBP22.49■■□□□ 1.19
LINC00963-208ENST00000454968 ABCA3Q99758 1704 aa22.49■■□□□ 1.19
LINC00963-208ENST00000454968 POLKQ9UBT6 870 aa22.48■■□□□ 1.19
LINC00963-208ENST00000454968 SHPRHQ149N8 1683 aa22.48■■□□□ 1.19
LINC00963-208ENST00000454968 PHLPP1O60346 1717 aa22.48■■□□□ 1.19
LINC00963-208ENST00000454968 PEAK1Q9H792 1746 aa22.48■■□□□ 1.19
LINC00963-208ENST00000454968 MRS2Q9HD23 443 aa22.48■■□□□ 1.19
LINC00963-208ENST00000454968 KIF24Q5T7B8 1368 aa22.48■■□□□ 1.19
LINC00963-208ENST00000454968 LTN1O94822 1766 aa22.47■■□□□ 1.19
LINC00963-208ENST00000454968 MTHFSP49914 203 aa22.47■■□□□ 1.19
LINC00963-208ENST00000454968 UBAP1LF5GYI3 381 aa22.46■■□□□ 1.19
LINC00963-208ENST00000454968 TNNT2P45379 298 aaPredicted RBP22.46■■□□□ 1.19
LINC00963-208ENST00000454968 PNISRQ8TF01 805 aaKnown RBP22.46■■□□□ 1.19
LINC00963-208ENST00000454968 KCNH5Q8NCM2 988 aa22.44■■□□□ 1.18
LINC00963-208ENST00000454968 FBLN1P23142 703 aa22.43■■□□□ 1.18
LINC00963-208ENST00000454968 NUTM2GQ5VZR2 741 aa22.42■■□□□ 1.18
LINC00963-208ENST00000454968 GCP02774 474 aa22.41■■□□□ 1.18
LINC00963-208ENST00000454968 ABCC6O95255 1503 aa22.41■■□□□ 1.18
LINC00963-208ENST00000454968 MAP3K19Q56UN5 1328 aa22.41■■□□□ 1.18
LINC00963-208ENST00000454968 LRRC59Q96AG4 307 aaKnown RBP22.4■■□□□ 1.18
LINC00963-208ENST00000454968 EMILIN1Q9Y6C2 1016 aa22.4■■□□□ 1.18
LINC00963-208ENST00000454968 RTL1A6NKG5 1358 aa22.4■■□□□ 1.18
LINC00963-208ENST00000454968 COL18A1P39060 1754 aa22.39■■□□□ 1.18
LINC00963-208ENST00000454968 RRS1Q15050 365 aaKnown RBP22.39■■□□□ 1.17
LINC00963-208ENST00000454968 CPDO75976 1380 aa22.38■■□□□ 1.17
LINC00963-208ENST00000454968 FLT4P35916 1363 aa22.38■■□□□ 1.17
LINC00963-208ENST00000454968 PIP4K2BP78356 416 aa22.37■■□□□ 1.17
LINC00963-208ENST00000454968 ARHGEF25Q86VW2 580 aa22.37■■□□□ 1.17
LINC00963-208ENST00000454968 CFAP53Q96M91 514 aa22.37■■□□□ 1.17
LINC00963-208ENST00000454968 RGPD1P0DJD0 1748 aa22.37■■□□□ 1.17
LINC00963-208ENST00000454968 LMOD2Q6P5Q4 547 aa22.36■■□□□ 1.17
LINC00963-208ENST00000454968 LMO7Q8WWI1 1683 aa22.32■■□□□ 1.16
LINC00963-208ENST00000454968 HOXC9P31274 260 aa22.31■■□□□ 1.16
LINC00963-208ENST00000454968 IL13P35225 146 aa22.31■■□□□ 1.16
LINC00963-208ENST00000454968 IP6K1Q92551 441 aa22.31■■□□□ 1.16
LINC00963-208ENST00000454968 BLMP54132 1417 aaPredicted RBP22.31■■□□□ 1.16
LINC00963-208ENST00000454968 RGPD5Q99666 1765 aa22.31■■□□□ 1.16
LINC00963-208ENST00000454968 CABLES1Q8TDN4 633 aa22.31■■□□□ 1.16
LINC00963-208ENST00000454968 SOX12O15370 315 aa22.3■■□□□ 1.16
LINC00963-208ENST00000454968 DIAPH1O60610 1272 aaKnown RBP22.3■■□□□ 1.16
LINC00963-208ENST00000454968 HSP90AB2PQ58FF8 381 aa22.3■■□□□ 1.16
LINC00963-208ENST00000454968 ADAMTS8Q9UP79 889 aa22.28■■□□□ 1.16
LINC00963-208ENST00000454968 CAMTA1Q9Y6Y1 1673 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms