RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 PPIP5K1Q6PFW1 1433 aa15.37■□□□□ 0.05
LMCD1-205ENST00000454244 NUTM2GQ5VZR2 741 aa15.37■□□□□ 0.05
LMCD1-205ENST00000454244 RALGAPBQ86X10 1494 aa15.37■□□□□ 0.05
LMCD1-205ENST00000454244 ALS2Q96Q42 1657 aa15.37■□□□□ 0.05
LMCD1-205ENST00000454244 EVC2Q86UK5 1308 aa15.37■□□□□ 0.05
LMCD1-205ENST00000454244 ITSN1Q15811 1721 aa15.37■□□□□ 0.05
LMCD1-205ENST00000454244 VPS72Q15906 364 aa15.36■□□□□ 0.05
LMCD1-205ENST00000454244 CCDC9Q9Y3X0 531 aaKnown RBP15.36■□□□□ 0.05
LMCD1-205ENST00000454244 TOPAZ1Q8N9V7 1692 aa15.35■□□□□ 0.05
LMCD1-205ENST00000454244 ABCA3Q99758 1704 aa15.35■□□□□ 0.05
LMCD1-205ENST00000454244 BTG4Q9NY30 223 aa15.35■□□□□ 0.05
LMCD1-205ENST00000454244 CABP1Q9NZU7 370 aa15.35■□□□□ 0.05
LMCD1-205ENST00000454244 ATAD2Q6PL18 1390 aa15.35■□□□□ 0.05
LMCD1-205ENST00000454244 QRICH2Q9H0J4 1663 aa15.35■□□□□ 0.05
LMCD1-205ENST00000454244 ABTB2Q8N961 1025 aa15.34■□□□□ 0.05
LMCD1-205ENST00000454244 CARD11Q9BXL7 1154 aa15.34■□□□□ 0.05
LMCD1-205ENST00000454244 PRDM11Q9NQV5 511 aa15.34■□□□□ 0.05
LMCD1-205ENST00000454244 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.34■□□□□ 0.05
LMCD1-205ENST00000454244 GLI3P10071 1580 aa15.33■□□□□ 0.05
LMCD1-205ENST00000454244 KIAA0232Q92628 1395 aa15.32■□□□□ 0.04
LMCD1-205ENST00000454244 ZC3H6P61129 1189 aaKnown RBP15.31■□□□□ 0.04
LMCD1-205ENST00000454244 CHRNA2Q15822 529 aa15.31■□□□□ 0.04
LMCD1-205ENST00000454244 SEPT12Q8IYM1 358 aa15.31■□□□□ 0.04
LMCD1-205ENST00000454244 PLCH1Q4KWH8 1693 aa15.31■□□□□ 0.04
LMCD1-205ENST00000454244 NLRP13Q86W25 1043 aa15.3■□□□□ 0.04
LMCD1-205ENST00000454244 NWD2Q9ULI1 1742 aa15.29■□□□□ 0.04
LMCD1-205ENST00000454244 USP6P35125 1406 aa15.29■□□□□ 0.04
LMCD1-205ENST00000454244 BRD4O60885 1362 aaPredicted RBP15.29■□□□□ 0.04
LMCD1-205ENST00000454244 USP19O94966 1318 aa15.29■□□□□ 0.04
LMCD1-205ENST00000454244 COL14A1Q05707 1796 aaKnown RBP15.29■□□□□ 0.04
LMCD1-205ENST00000454244 A0A0G2JS52 829 aa15.28■□□□□ 0.04
LMCD1-205ENST00000454244 ONECUT3O60422 494 aaPredicted RBP15.28■□□□□ 0.04
LMCD1-205ENST00000454244 MYT1Q01538 1121 aa15.28■□□□□ 0.04
LMCD1-205ENST00000454244 CRYBG1Q9Y4K1 1723 aa15.28■□□□□ 0.04
LMCD1-205ENST00000454244 SBNO2Q9Y2G9 1366 aa15.27■□□□□ 0.04
LMCD1-205ENST00000454244 FAM98CQ17RN3 349 aaKnown RBP15.27■□□□□ 0.04
LMCD1-205ENST00000454244 SPATA31A5Q5VU36 1347 aa15.26■□□□□ 0.03
LMCD1-205ENST00000454244 SPATA31A7Q8IWB4 1347 aa15.26■□□□□ 0.03
LMCD1-205ENST00000454244 GCP02774 474 aa15.26■□□□□ 0.03
LMCD1-205ENST00000454244 NLRP6P59044 892 aa15.26■□□□□ 0.03
LMCD1-205ENST00000454244 STRN4Q9NRL3 753 aa15.26■□□□□ 0.03
LMCD1-205ENST00000454244 NRAPQ86VF7 1730 aa15.26■□□□□ 0.03
LMCD1-205ENST00000454244 SSH2Q76I76 1423 aa15.26■□□□□ 0.03
LMCD1-205ENST00000454244 PHRF1Q9P1Y6 1649 aaKnown RBP15.25■□□□□ 0.03
LMCD1-205ENST00000454244 ZNF692Q9BU19 519 aaPredicted RBP15.25■□□□□ 0.03
LMCD1-205ENST00000454244 CPDO75976 1380 aa15.24■□□□□ 0.03
LMCD1-205ENST00000454244 TTC21BQ7Z4L5 1316 aa15.24■□□□□ 0.03
LMCD1-205ENST00000454244 KRT27Q7Z3Y8 459 aa15.24■□□□□ 0.03
LMCD1-205ENST00000454244 PCGF6Q9BYE7 350 aa15.24■□□□□ 0.03
LMCD1-205ENST00000454244 NRKQ7Z2Y5 1582 aa15.24■□□□□ 0.03
LMCD1-205ENST00000454244 ZBTB7CA1YPR0 619 aa15.23■□□□□ 0.03
LMCD1-205ENST00000454244 EVA1CP58658 441 aa15.23■□□□□ 0.03
LMCD1-205ENST00000454244 CCDC125Q86Z20 511 aa15.23■□□□□ 0.03
LMCD1-205ENST00000454244 SPATA31A1Q5TZJ5 1347 aa15.22■□□□□ 0.03
LMCD1-205ENST00000454244 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
LMCD1-205ENST00000454244 CPSF1Q10570 1443 aaKnown RBP15.22■□□□□ 0.03
LMCD1-205ENST00000454244 ST20-MTHFSA0A0A6YYL1 179 aa15.21■□□□□ 0.03
LMCD1-205ENST00000454244 KTN1Q86UP2 1357 aaKnown RBP15.21■□□□□ 0.02
LMCD1-205ENST00000454244 TTC21AQ8NDW8 1320 aa15.2■□□□□ 0.02
LMCD1-205ENST00000454244 LARP1Q6PKG0 1096 aaKnown RBP15.2■□□□□ 0.02
LMCD1-205ENST00000454244 SLC12A5Q9H2X9 1139 aa15.2■□□□□ 0.02
LMCD1-205ENST00000454244 USP35Q9P2H5 1018 aa15.2■□□□□ 0.02
LMCD1-205ENST00000454244 CAMTA1Q9Y6Y1 1673 aa15.19■□□□□ 0.02
LMCD1-205ENST00000454244 BLMP54132 1417 aaPredicted RBP15.19■□□□□ 0.02
LMCD1-205ENST00000454244 TESK2Q96S53 571 aa15.19■□□□□ 0.02
LMCD1-205ENST00000454244 SLIT3O75094 1523 aa15.18■□□□□ 0.02
LMCD1-205ENST00000454244 SOX12O15370 315 aa15.18■□□□□ 0.02
LMCD1-205ENST00000454244 HDGFL2Q7Z4V5 671 aaPredicted RBP15.18■□□□□ 0.02
LMCD1-205ENST00000454244 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.18■□□□□ 0.02
LMCD1-205ENST00000454244 PUS7Q96PZ0 661 aaKnown RBP15.18■□□□□ 0.02
LMCD1-205ENST00000454244 BRWD3Q6RI45 1802 aa15.17■□□□□ 0.02
LMCD1-205ENST00000454244 PIK3C2AO00443 1686 aa15.17■□□□□ 0.02
LMCD1-205ENST00000454244 AATKQ6ZMQ8 1374 aa15.17■□□□□ 0.02
LMCD1-205ENST00000454244 SF3B2Q13435 895 aaKnown RBP15.17■□□□□ 0.02
LMCD1-205ENST00000454244 FAM182BQ5T319 152 aa15.17■□□□□ 0.02
LMCD1-205ENST00000454244 KCNH5Q8NCM2 988 aa15.17■□□□□ 0.02
LMCD1-205ENST00000454244 CLSPNQ9HAW4 1339 aa15.17■□□□□ 0.02
LMCD1-205ENST00000454244 CD163L1Q9NR16 1453 aa15.16■□□□□ 0.02
LMCD1-205ENST00000454244 BARGINQ6ZT62 677 aa15.16■□□□□ 0.02
LMCD1-205ENST00000454244 DEFB132Q7Z7B7 95 aa15.16■□□□□ 0.02
LMCD1-205ENST00000454244 TCP11L2Q8N4U5 519 aa15.16■□□□□ 0.02
LMCD1-205ENST00000454244 ZRANB1Q9UGI0 708 aa15.16■□□□□ 0.02
LMCD1-205ENST00000454244 LMO7Q8WWI1 1683 aa15.16■□□□□ 0.02
LMCD1-205ENST00000454244 COL5A2P05997 1499 aaPredicted RBP15.15■□□□□ 0.02
LMCD1-205ENST00000454244 USP47Q96K76 1375 aa15.15■□□□□ 0.02
LMCD1-205ENST00000454244 ARHGEF25Q86VW2 580 aa15.15■□□□□ 0.02
LMCD1-205ENST00000454244 NME9Q86XW9 330 aa15.15■□□□□ 0.02
LMCD1-205ENST00000454244 TERF2IPQ9NYB0 399 aa15.15■□□□□ 0.02
LMCD1-205ENST00000454244 TIMELESSQ9UNS1 1208 aa15.15■□□□□ 0.02
LMCD1-205ENST00000454244 AKAP12Q02952 1782 aa15.14■□□□□ 0.01
LMCD1-205ENST00000454244 THSD7AQ9UPZ6 1657 aa15.14■□□□□ 0.01
LMCD1-205ENST00000454244 SLC24A1O60721 1099 aa15.14■□□□□ 0.01
LMCD1-205ENST00000454244 A0A1W2PP64 1363 aa15.13■□□□□ 0.01
LMCD1-205ENST00000454244 USP31Q70CQ4 1352 aa15.13■□□□□ 0.01
LMCD1-205ENST00000454244 AXIN2Q9Y2T1 843 aa15.13■□□□□ 0.01
LMCD1-205ENST00000454244 THRAP3Q9Y2W1 955 aaKnown RBP15.13■□□□□ 0.01
LMCD1-205ENST00000454244 EDC4Q6P2E9 1401 aaKnown RBP15.12■□□□□ 0.01
LMCD1-205ENST00000454244 TOM1L2Q6ZVM7 507 aa15.12■□□□□ 0.01
LMCD1-205ENST00000454244 CRB1P82279 1406 aa15.11■□□□□ 0.01
LMCD1-205ENST00000454244 TMF1P82094 1093 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms