RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 HRCP23327 699 aa34.64■■■■□ 3.14
LYSMD2-202ENST00000454181 FAM98CQ17RN3 349 aaKnown RBP34.64■■■■□ 3.14
LYSMD2-202ENST00000454181 TRPM3Q9HCF6 1732 aaPredicted RBP34.6■■■■□ 3.13
LYSMD2-202ENST00000454181 NUDT16Q96DE0 195 aaKnown RBP34.59■■■■□ 3.13
LYSMD2-202ENST00000454181 PRDM11Q9NQV5 511 aa34.59■■■■□ 3.13
LYSMD2-202ENST00000454181 BAG6P46379 1132 aa34.56■■■■□ 3.12
LYSMD2-202ENST00000454181 ALS2Q96Q42 1657 aa34.56■■■■□ 3.12
LYSMD2-202ENST00000454181 COL14A1Q05707 1796 aaKnown RBP34.56■■■■□ 3.12
LYSMD2-202ENST00000454181 CDK19Q9BWU1 502 aa34.52■■■■□ 3.12
LYSMD2-202ENST00000454181 SPATA31A5Q5VU36 1347 aa34.52■■■■□ 3.12
LYSMD2-202ENST00000454181 SPATA31A7Q8IWB4 1347 aa34.52■■■■□ 3.12
LYSMD2-202ENST00000454181 NRAPQ86VF7 1730 aa34.51■■■■□ 3.12
LYSMD2-202ENST00000454181 ATP7BP35670 1465 aa34.47■■■■□ 3.11
LYSMD2-202ENST00000454181 CCDC61Q9Y6R9 512 aa34.46■■■■□ 3.11
LYSMD2-202ENST00000454181 ITSN1Q15811 1721 aa34.46■■■■□ 3.11
LYSMD2-202ENST00000454181 ARHGEF28Q8N1W1 1705 aaKnown RBP34.46■■■■□ 3.11
LYSMD2-202ENST00000454181 NUTM2GQ5VZR2 741 aa34.45■■■■□ 3.11
LYSMD2-202ENST00000454181 KIAA0232Q92628 1395 aa34.45■■■■□ 3.11
LYSMD2-202ENST00000454181 CHRNA2Q15822 529 aa34.44■■■■□ 3.1
LYSMD2-202ENST00000454181 STRN4Q9NRL3 753 aa34.44■■■■□ 3.1
LYSMD2-202ENST00000454181 ZC3H6P61129 1189 aaKnown RBP34.43■■■■□ 3.1
LYSMD2-202ENST00000454181 FAM182BQ5T319 152 aa34.43■■■■□ 3.1
LYSMD2-202ENST00000454181 ACEP12821 1306 aa34.42■■■■□ 3.1
LYSMD2-202ENST00000454181 NBPF8Q3BBV2 869 aa34.42■■■■□ 3.1
LYSMD2-202ENST00000454181 EVA1CP58658 441 aa34.4■■■■□ 3.1
LYSMD2-202ENST00000454181 SPATA31A1Q5TZJ5 1347 aa34.39■■■■□ 3.1
LYSMD2-202ENST00000454181 EN1Q05925 392 aaPredicted RBP34.39■■■■□ 3.1
LYSMD2-202ENST00000454181 PSDA5PKW4 1024 aaPredicted RBP34.38■■■■□ 3.09
LYSMD2-202ENST00000454181 POLR3AO14802 1390 aaPredicted RBP34.37■■■■□ 3.09
LYSMD2-202ENST00000454181 PLEKHG3A1L390 1219 aa34.37■■■■□ 3.09
LYSMD2-202ENST00000454181 ABTB2Q8N961 1025 aa34.37■■■■□ 3.09
LYSMD2-202ENST00000454181 CRYBG1Q9Y4K1 1723 aa34.37■■■■□ 3.09
LYSMD2-202ENST00000454181 SRPK2P78362 688 aaKnown RBP34.35■■■■□ 3.09
LYSMD2-202ENST00000454181 USP35Q9P2H5 1018 aa34.35■■■■□ 3.09
LYSMD2-202ENST00000454181 NBPF1Q3BBV0 1214 aa34.34■■■■□ 3.09
LYSMD2-202ENST00000454181 FAM196AQ6ZSG2 479 aa34.32■■■■□ 3.08
LYSMD2-202ENST00000454181 KIAA1210Q9ULL0 1709 aa34.3■■■■□ 3.08
LYSMD2-202ENST00000454181 THSD7AQ9UPZ6 1657 aa34.3■■■■□ 3.08
LYSMD2-202ENST00000454181 RGPD1P0DJD0 1748 aa34.3■■■■□ 3.08
LYSMD2-202ENST00000454181 PHRF1Q9P1Y6 1649 aaKnown RBP34.29■■■■□ 3.08
LYSMD2-202ENST00000454181 CENPJQ9HC77 1338 aaPredicted RBP34.29■■■■□ 3.08
LYSMD2-202ENST00000454181 PDE3BQ13370 1112 aa34.28■■■■□ 3.08
LYSMD2-202ENST00000454181 NLRP13Q86W25 1043 aa34.28■■■■□ 3.08
LYSMD2-202ENST00000454181 TRIM37O94972 964 aa34.27■■■■□ 3.08
LYSMD2-202ENST00000454181 BARGINQ6ZT62 677 aa34.25■■■■□ 3.07
LYSMD2-202ENST00000454181 CABP2Q9NPB3 220 aa34.25■■■■□ 3.07
LYSMD2-202ENST00000454181 TOPAZ1Q8N9V7 1692 aa34.25■■■■□ 3.07
LYSMD2-202ENST00000454181 PPIP5K1Q6PFW1 1433 aa34.24■■■■□ 3.07
LYSMD2-202ENST00000454181 SSH2Q76I76 1423 aa34.24■■■■□ 3.07
LYSMD2-202ENST00000454181 DISP2A7MBM2 1401 aa34.23■■■■□ 3.07
LYSMD2-202ENST00000454181 R3HDM1Q15032 1099 aaKnown RBP34.23■■■■□ 3.07
LYSMD2-202ENST00000454181 EZH2Q15910 746 aaKnown RBP34.23■■■■□ 3.07
LYSMD2-202ENST00000454181 LARP1Q6PKG0 1096 aaKnown RBP34.22■■■■□ 3.07
LYSMD2-202ENST00000454181 TCP11L2Q8N4U5 519 aa34.22■■■■□ 3.07
LYSMD2-202ENST00000454181 LRP5O75197 1615 aa34.22■■■■□ 3.07
LYSMD2-202ENST00000454181 CPDO75976 1380 aa34.22■■■■□ 3.07
LYSMD2-202ENST00000454181 APBA3O96018 575 aa34.21■■■■□ 3.07
LYSMD2-202ENST00000454181 GCP02774 474 aa34.21■■■■□ 3.07
LYSMD2-202ENST00000454181 USP19O94966 1318 aa34.21■■■■□ 3.07
LYSMD2-202ENST00000454181 BRD4O60885 1362 aaPredicted RBP34.18■■■■□ 3.06
LYSMD2-202ENST00000454181 ZBTB7CA1YPR0 619 aa34.17■■■■□ 3.06
LYSMD2-202ENST00000454181 NRKQ7Z2Y5 1582 aa34.17■■■■□ 3.06
LYSMD2-202ENST00000454181 CAMTA1Q9Y6Y1 1673 aa34.17■■■■□ 3.06
LYSMD2-202ENST00000454181 CAMKK2Q96RR4 588 aa34.16■■■■□ 3.06
LYSMD2-202ENST00000454181 THRAP3Q9Y2W1 955 aaKnown RBP34.16■■■■□ 3.06
LYSMD2-202ENST00000454181 CABP1Q9NZU7 370 aa34.15■■■■□ 3.06
LYSMD2-202ENST00000454181 NLRP6P59044 892 aa34.14■■■■□ 3.06
LYSMD2-202ENST00000454181 TNS1Q9HBL0 1735 aaKnown RBP34.13■■■■□ 3.05
LYSMD2-202ENST00000454181 PARD3Q8TEW0 1356 aa34.13■■■■□ 3.05
LYSMD2-202ENST00000454181 L3MBTL2Q969R5 705 aa34.11■■■■□ 3.05
LYSMD2-202ENST00000454181 EVC2Q86UK5 1308 aa34.09■■■■□ 3.05
LYSMD2-202ENST00000454181 USP6P35125 1406 aa34.07■■■■□ 3.04
LYSMD2-202ENST00000454181 LMO7Q8WWI1 1683 aa34.07■■■■□ 3.04
LYSMD2-202ENST00000454181 C11orf95C9JLR9 678 aaPredicted RBP34.07■■■■□ 3.04
LYSMD2-202ENST00000454181 NBPF14Q5TI25 921 aa34.07■■■■□ 3.04
LYSMD2-202ENST00000454181 COL5A2P05997 1499 aaPredicted RBP34.06■■■■□ 3.04
LYSMD2-202ENST00000454181 QRICH2Q9H0J4 1663 aa34.06■■■■□ 3.04
LYSMD2-202ENST00000454181 CRB1P82279 1406 aa34.04■■■■□ 3.04
LYSMD2-202ENST00000454181 AATKQ6ZMQ8 1374 aa34.02■■■■□ 3.04
LYSMD2-202ENST00000454181 TOM1L2Q6ZVM7 507 aa34.02■■■■□ 3.04
LYSMD2-202ENST00000454181 ZNF692Q9BU19 519 aaPredicted RBP34■■■■□ 3.03
LYSMD2-202ENST00000454181 NEUROD1Q13562 356 aa33.99■■■■□ 3.03
LYSMD2-202ENST00000454181 SIN3AQ96ST3 1273 aa33.99■■■■□ 3.03
LYSMD2-202ENST00000454181 ROCK2O75116 1388 aaKnown RBP33.98■■■■□ 3.03
LYSMD2-202ENST00000454181 DDB1Q16531 1140 aa33.97■■■■□ 3.03
LYSMD2-202ENST00000454181 KCNH5Q8NCM2 988 aa33.95■■■■□ 3.03
LYSMD2-202ENST00000454181 SLIT3O75094 1523 aa33.94■■■■□ 3.02
LYSMD2-202ENST00000454181 TTC21BQ7Z4L5 1316 aa33.93■■■■□ 3.02
LYSMD2-202ENST00000454181 OVOS2A0A0G2JMS6 1433 aa33.93■■■■□ 3.02
LYSMD2-202ENST00000454181 OVOS2A0A0J9YW53 1432 aa33.93■■■■□ 3.02
LYSMD2-202ENST00000454181 OVOS2Q6IE36 1432 aa33.93■■■■□ 3.02
LYSMD2-202ENST00000454181 PARP4Q9UKK3 1724 aaKnown RBP33.92■■■■□ 3.02
LYSMD2-202ENST00000454181 WDR17Q8IZU2 1322 aa33.91■■■■□ 3.02
LYSMD2-202ENST00000454181 SOX12O15370 315 aa33.91■■■■□ 3.02
LYSMD2-202ENST00000454181 CSB-PGBD3P0DP91 1061 aa33.91■■■■□ 3.02
LYSMD2-202ENST00000454181 CDCA7Q9BWT1 371 aaPredicted RBP33.9■■■■□ 3.02
LYSMD2-202ENST00000454181 AXIN2Q9Y2T1 843 aa33.89■■■■□ 3.02
LYSMD2-202ENST00000454181 TTC21AQ8NDW8 1320 aa33.88■■■■□ 3.01
LYSMD2-202ENST00000454181 ARHGEF25Q86VW2 580 aa33.88■■■■□ 3.01
LYSMD2-202ENST00000454181 TRPM1Q7Z4N2 1603 aa33.88■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms