RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 SOBPA7XYQ1 873 aa8.52□□□□□ -1.04
PCGEM1-201ENST00000454040 DXOO77932 396 aaKnown RBP8.52□□□□□ -1.05
PCGEM1-201ENST00000454040 Q3C1V9 767 aa8.52□□□□□ -1.05
PCGEM1-201ENST00000454040 PURBQ96QR8 312 aaKnown RBP8.52□□□□□ -1.05
PCGEM1-201ENST00000454040 MSTNO14793 375 aa8.51□□□□□ -1.05
PCGEM1-201ENST00000454040 GCGRP47871 477 aa8.51□□□□□ -1.05
PCGEM1-201ENST00000454040 KRT76Q01546 638 aa8.51□□□□□ -1.05
PCGEM1-201ENST00000454040 GRIPAP1Q4V328 841 aa8.51□□□□□ -1.05
PCGEM1-201ENST00000454040 ZNF385CQ66K41 422 aaPredicted RBP8.51□□□□□ -1.05
PCGEM1-201ENST00000454040 CCDC24Q8N4L8 307 aa8.51□□□□□ -1.05
PCGEM1-201ENST00000454040 EHBP1Q8NDI1 1231 aa8.51□□□□□ -1.05
PCGEM1-201ENST00000454040 CNTNAP3BQ96NU0 1288 aa8.51□□□□□ -1.05
PCGEM1-201ENST00000454040 CNTNAP3Q9BZ76 1288 aa8.51□□□□□ -1.05
PCGEM1-201ENST00000454040 APBB1O00213 710 aa8.5□□□□□ -1.05
PCGEM1-201ENST00000454040 SVOPQ8N4V2 548 aa8.5□□□□□ -1.05
PCGEM1-201ENST00000454040 WDR70Q9NW82 654 aa8.5□□□□□ -1.05
PCGEM1-201ENST00000454040 MARSP56192 900 aaKnown RBP8.49□□□□□ -1.05
PCGEM1-201ENST00000454040 SCARF2Q96GP6 870 aaPredicted RBP8.49□□□□□ -1.05
PCGEM1-201ENST00000454040 NACADO15069 1562 aa8.49□□□□□ -1.05
PCGEM1-201ENST00000454040 Q8N3U1 123 aa8.48□□□□□ -1.05
PCGEM1-201ENST00000454040 ABCC9O60706 1549 aa8.47□□□□□ -1.05
PCGEM1-201ENST00000454040 MAN1A2O60476 641 aa8.47□□□□□ -1.05
PCGEM1-201ENST00000454040 ARHGEF15O94989 841 aa8.46□□□□□ -1.06
PCGEM1-201ENST00000454040 METTL3Q86U44 580 aaKnown RBP8.46□□□□□ -1.06
PCGEM1-201ENST00000454040 USB1Q9BQ65 265 aaKnown RBP8.46□□□□□ -1.06
PCGEM1-201ENST00000454040 GPBP1L1Q9HC44 474 aaPredicted RBP8.46□□□□□ -1.06
PCGEM1-201ENST00000454040 DDX11L8A8MPP1 907 aa8.45□□□□□ -1.06
PCGEM1-201ENST00000454040 IL27Q8NEV9 243 aa8.45□□□□□ -1.06
PCGEM1-201ENST00000454040 ZMYND10O75800 440 aa8.44□□□□□ -1.06
PCGEM1-201ENST00000454040 GPR161Q8N6U8 529 aaKnown RBP8.44□□□□□ -1.06
PCGEM1-201ENST00000454040 FCHSD2O94868 740 aa8.44□□□□□ -1.06
PCGEM1-201ENST00000454040 SPOCK3Q9BQ16 436 aa8.44□□□□□ -1.06
PCGEM1-201ENST00000454040 NUTM2FA1L443 756 aa8.43□□□□□ -1.06
PCGEM1-201ENST00000454040 SULF1Q8IWU6 871 aa8.43□□□□□ -1.06
PCGEM1-201ENST00000454040 RGS22Q8NE09 1264 aa8.43□□□□□ -1.06
PCGEM1-201ENST00000454040 MLLT3P42568 568 aaPredicted RBP8.42□□□□□ -1.06
PCGEM1-201ENST00000454040 PLA2G4EQ3MJ16 856 aa8.42□□□□□ -1.06
PCGEM1-201ENST00000454040 LCE3BQ5TA77 95 aa8.42□□□□□ -1.06
PCGEM1-201ENST00000454040 RAD21O60216 631 aa8.41□□□□□ -1.06
PCGEM1-201ENST00000454040 COL25A1Q9BXS0 654 aaPredicted RBP8.41□□□□□ -1.06
PCGEM1-201ENST00000454040 PLEKHG3A1L390 1219 aa8.4□□□□□ -1.06
PCGEM1-201ENST00000454040 SLURP2P0DP57 97 aa8.4□□□□□ -1.06
PCGEM1-201ENST00000454040 TIMP2P16035 220 aa8.4□□□□□ -1.06
PCGEM1-201ENST00000454040 NNTQ13423 1086 aa8.4□□□□□ -1.06
PCGEM1-201ENST00000454040 K7ELQ4 463 aaPredicted RBP8.39□□□□□ -1.07
PCGEM1-201ENST00000454040 CCDC82Q8N4S0 544 aa8.39□□□□□ -1.07
PCGEM1-201ENST00000454040 ADH1CP00326 375 aa8.39□□□□□ -1.07
PCGEM1-201ENST00000454040 WHAMMQ8TF30 809 aa8.39□□□□□ -1.07
PCGEM1-201ENST00000454040 SCRIBQ14160 1630 aa8.38□□□□□ -1.07
PCGEM1-201ENST00000454040 TESPA1A2RU30 521 aaPredicted RBP8.38□□□□□ -1.07
PCGEM1-201ENST00000454040 WDR4P57081 412 aaKnown RBP8.38□□□□□ -1.07
PCGEM1-201ENST00000454040 MPNDQ8N594 471 aa8.38□□□□□ -1.07
PCGEM1-201ENST00000454040 SEMA3EO15041 775 aa8.37□□□□□ -1.07
PCGEM1-201ENST00000454040 ZNF428Q96B54 188 aa8.37□□□□□ -1.07
PCGEM1-201ENST00000454040 MTMR7Q9Y216 660 aa8.37□□□□□ -1.07
PCGEM1-201ENST00000454040 SH3BP2P78314 561 aa8.35□□□□□ -1.07
PCGEM1-201ENST00000454040 BARGINQ6ZT62 677 aa8.35□□□□□ -1.07
PCGEM1-201ENST00000454040 GALNT6Q8NCL4 622 aa8.35□□□□□ -1.07
PCGEM1-201ENST00000454040 NANOS1Q8WY41 292 aaKnown RBP8.35□□□□□ -1.07
PCGEM1-201ENST00000454040 RSF1Q96T23 1441 aaPredicted RBP8.35□□□□□ -1.07
PCGEM1-201ENST00000454040 PROCP04070 461 aa8.35□□□□□ -1.07
PCGEM1-201ENST00000454040 DCAF5Q96JK2 942 aa8.35□□□□□ -1.07
PCGEM1-201ENST00000454040 TRAIPQ9BWF2 469 aa8.35□□□□□ -1.07
PCGEM1-201ENST00000454040 KLF16Q9BXK1 252 aaPredicted RBP8.35□□□□□ -1.07
PCGEM1-201ENST00000454040 KDM4CQ9H3R0 1056 aa8.35□□□□□ -1.07
PCGEM1-201ENST00000454040 TLL2Q9Y6L7 1015 aa8.35□□□□□ -1.07
PCGEM1-201ENST00000454040 RB1CC1Q8TDY2 1594 aa8.34□□□□□ -1.08
PCGEM1-201ENST00000454040 ITGB2P05107 769 aa8.33□□□□□ -1.08
PCGEM1-201ENST00000454040 JUNDP17535 347 aa8.33□□□□□ -1.08
PCGEM1-201ENST00000454040 RNFT1Q5M7Z0 435 aa8.33□□□□□ -1.08
PCGEM1-201ENST00000454040 C6orf118Q5T5N4 469 aa8.33□□□□□ -1.08
PCGEM1-201ENST00000454040 PTCRAQ6ISU1 281 aaPredicted RBP8.33□□□□□ -1.08
PCGEM1-201ENST00000454040 BTBD11A6QL63 1104 aa8.32□□□□□ -1.08
PCGEM1-201ENST00000454040 ARHGEF1Q92888 912 aaKnown RBP8.32□□□□□ -1.08
PCGEM1-201ENST00000454040 KRTAP4-12Q9BQ66 201 aa8.32□□□□□ -1.08
PCGEM1-201ENST00000454040 FOXD4L5Q5VV16 416 aaPredicted RBP8.31□□□□□ -1.08
PCGEM1-201ENST00000454040 FOXD4L4Q8WXT5 416 aaPredicted RBP8.31□□□□□ -1.08
PCGEM1-201ENST00000454040 PHF20L1A8MW92 1017 aa8.31□□□□□ -1.08
PCGEM1-201ENST00000454040 CDK11BP21127 795 aaKnown RBP8.31□□□□□ -1.08
PCGEM1-201ENST00000454040 AK7Q96M32 723 aa8.31□□□□□ -1.08
PCGEM1-201ENST00000454040 CDK11AQ9UQ88 783 aaPredicted RBP8.31□□□□□ -1.08
PCGEM1-201ENST00000454040 UPP2O95045 317 aa8.3□□□□□ -1.08
PCGEM1-201ENST00000454040 HMGB1P09429 215 aaKnown RBP8.3□□□□□ -1.08
PCGEM1-201ENST00000454040 VARSP26640 1264 aaKnown RBP8.3□□□□□ -1.08
PCGEM1-201ENST00000454040 HIC1Q14526 733 aa8.3□□□□□ -1.08
PCGEM1-201ENST00000454040 NUDT12Q9BQG2 462 aa8.3□□□□□ -1.08
PCGEM1-201ENST00000454040 SOS2Q07890 1332 aaPredicted RBP8.3□□□□□ -1.08
PCGEM1-201ENST00000454040 BMP2P12643 396 aa8.29□□□□□ -1.08
PCGEM1-201ENST00000454040 RBM25P49756 843 aaKnown RBP8.29□□□□□ -1.08
PCGEM1-201ENST00000454040 AEBP1Q8IUX7 1158 aa8.29□□□□□ -1.08
PCGEM1-201ENST00000454040 DNMT3LQ9UJW3 386 aa8.29□□□□□ -1.08
PCGEM1-201ENST00000454040 MAP3K10Q02779 954 aa8.28□□□□□ -1.08
PCGEM1-201ENST00000454040 HSP90B1P14625 803 aaKnown RBP8.27□□□□□ -1.09
PCGEM1-201ENST00000454040 KRTAP9-9Q9BYP9 154 aa8.27□□□□□ -1.09
PCGEM1-201ENST00000454040 KRTAP9-4Q9BYQ2 154 aa8.27□□□□□ -1.09
PCGEM1-201ENST00000454040 TRAK2O60296 914 aa8.27□□□□□ -1.09
PCGEM1-201ENST00000454040 ZIC2O95409 532 aaPredicted RBP8.27□□□□□ -1.09
PCGEM1-201ENST00000454040 MFAP1P55081 439 aaKnown RBP8.27□□□□□ -1.09
PCGEM1-201ENST00000454040 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.27□□□□□ -1.09
PCGEM1-201ENST00000454040 TMCO4Q5TGY1 634 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms