RNA–Protein interactions for RNA: ENST00000453863.5

RNF220-206, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-206ENST00000453863 NWD2Q9ULI1 1742 aa12.78□□□□□ -0.36
RNF220-206ENST00000453863 PHRF1Q9P1Y6 1649 aaKnown RBP12.77□□□□□ -0.36
RNF220-206ENST00000453863 PLCH1Q4KWH8 1693 aa12.77□□□□□ -0.36
RNF220-206ENST00000453863 CRYBG1Q9Y4K1 1723 aa12.77□□□□□ -0.36
RNF220-206ENST00000453863 AKAP12Q02952 1782 aa12.77□□□□□ -0.36
RNF220-206ENST00000453863 SOCS7O14512 581 aa12.77□□□□□ -0.37
RNF220-206ENST00000453863 NINLQ9Y2I6 1382 aa12.77□□□□□ -0.37
RNF220-206ENST00000453863 USP6P35125 1406 aa12.77□□□□□ -0.37
RNF220-206ENST00000453863 CDK12Q9NYV4 1490 aaPredicted RBP12.77□□□□□ -0.37
RNF220-206ENST00000453863 POTEAQ6S8J7 498 aa12.76□□□□□ -0.37
RNF220-206ENST00000453863 COL14A1Q05707 1796 aaKnown RBP12.76□□□□□ -0.37
RNF220-206ENST00000453863 MON2Q7Z3U7 1717 aa12.75□□□□□ -0.37
RNF220-206ENST00000453863 CABP1Q9NZU7 370 aa12.75□□□□□ -0.37
RNF220-206ENST00000453863 USP21Q9UK80 565 aa12.75□□□□□ -0.37
RNF220-206ENST00000453863 NRKQ7Z2Y5 1582 aa12.74□□□□□ -0.37
RNF220-206ENST00000453863 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
RNF220-206ENST00000453863 RXRBP28702 533 aa12.74□□□□□ -0.37
RNF220-206ENST00000453863 CDCA8Q53HL2 280 aa12.74□□□□□ -0.37
RNF220-206ENST00000453863 PUS7Q96PZ0 661 aaKnown RBP12.74□□□□□ -0.37
RNF220-206ENST00000453863 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
RNF220-206ENST00000453863 TRPC5Q9UL62 973 aaPredicted RBP12.74□□□□□ -0.37
RNF220-206ENST00000453863 SLIT2O94813 1529 aa12.73□□□□□ -0.37
RNF220-206ENST00000453863 ST20-MTHFSA0A0A6YYL1 179 aa12.73□□□□□ -0.37
RNF220-206ENST00000453863 TMF1P82094 1093 aa12.73□□□□□ -0.37
RNF220-206ENST00000453863 FNBP4Q8N3X1 1017 aaPredicted RBP12.73□□□□□ -0.37
RNF220-206ENST00000453863 ABTB2Q8N961 1025 aa12.73□□□□□ -0.37
RNF220-206ENST00000453863 ATRNO75882 1429 aa12.72□□□□□ -0.37
RNF220-206ENST00000453863 KTN1Q86UP2 1357 aaKnown RBP12.72□□□□□ -0.37
RNF220-206ENST00000453863 TTC21AQ8NDW8 1320 aa12.72□□□□□ -0.37
RNF220-206ENST00000453863 RBM6P78332 1123 aaKnown RBP12.72□□□□□ -0.37
RNF220-206ENST00000453863 HDGFL2Q7Z4V5 671 aaPredicted RBP12.72□□□□□ -0.37
RNF220-206ENST00000453863 NLRP13Q86W25 1043 aa12.72□□□□□ -0.37
RNF220-206ENST00000453863 CABLES1Q8TDN4 633 aa12.72□□□□□ -0.37
RNF220-206ENST00000453863 QTRT2Q9H974 415 aaKnown RBP12.72□□□□□ -0.37
RNF220-206ENST00000453863 TERF2IPQ9NYB0 399 aa12.72□□□□□ -0.37
RNF220-206ENST00000453863 PIK3C2AO00443 1686 aa12.71□□□□□ -0.37
RNF220-206ENST00000453863 TMC1Q8TDI8 760 aa12.71□□□□□ -0.37
RNF220-206ENST00000453863 PRDM11Q9NQV5 511 aa12.71□□□□□ -0.37
RNF220-206ENST00000453863 CPSF1Q10570 1443 aaKnown RBP12.71□□□□□ -0.38
RNF220-206ENST00000453863 USP19O94966 1318 aa12.7□□□□□ -0.38
RNF220-206ENST00000453863 UNC5CLQ8IV45 518 aa12.7□□□□□ -0.38
RNF220-206ENST00000453863 NRAPQ86VF7 1730 aa12.7□□□□□ -0.38
RNF220-206ENST00000453863 BCL9LQ86UU0 1499 aa12.7□□□□□ -0.38
RNF220-206ENST00000453863 TESK2Q96S53 571 aa12.69□□□□□ -0.38
RNF220-206ENST00000453863 EDC4Q6P2E9 1401 aaKnown RBP12.69□□□□□ -0.38
RNF220-206ENST00000453863 SLIT3O75094 1523 aa12.68□□□□□ -0.38
RNF220-206ENST00000453863 USP54Q70EL1 1684 aa12.68□□□□□ -0.38
RNF220-206ENST00000453863 NUTM2GQ5VZR2 741 aa12.68□□□□□ -0.38
RNF220-206ENST00000453863 RGS12O14924 1447 aa12.68□□□□□ -0.38
RNF220-206ENST00000453863 SSH2Q76I76 1423 aa12.68□□□□□ -0.38
RNF220-206ENST00000453863 CPDO75976 1380 aa12.68□□□□□ -0.38
RNF220-206ENST00000453863 KIAA0232Q92628 1395 aa12.68□□□□□ -0.38
RNF220-206ENST00000453863 TTC21BQ7Z4L5 1316 aa12.67□□□□□ -0.38
RNF220-206ENST00000453863 NLRP6P59044 892 aa12.67□□□□□ -0.38
RNF220-206ENST00000453863 EIF4G2P78344 907 aaKnown RBP eCLIP12.67□□□□□ -0.38
RNF220-206ENST00000453863 CCDC9Q9Y3X0 531 aaKnown RBP12.67□□□□□ -0.38
RNF220-206ENST00000453863 A0A1W2PP64 1363 aa12.67□□□□□ -0.38
RNF220-206ENST00000453863 CD163L1Q9NR16 1453 aa12.65□□□□□ -0.38
RNF220-206ENST00000453863 VPS72Q15906 364 aa12.65□□□□□ -0.38
RNF220-206ENST00000453863 KCNH5Q8NCM2 988 aa12.65□□□□□ -0.38
RNF220-206ENST00000453863 GJD4Q96KN9 370 aaPredicted RBP12.65□□□□□ -0.38
RNF220-206ENST00000453863 BTG4Q9NY30 223 aa12.65□□□□□ -0.38
RNF220-206ENST00000453863 ABCC6O95255 1503 aa12.65□□□□□ -0.38
RNF220-206ENST00000453863 ANKRD36BQ8N2N9 1353 aa12.65□□□□□ -0.38
RNF220-206ENST00000453863 GLI3P10071 1580 aa12.64□□□□□ -0.39
RNF220-206ENST00000453863 FAM83GA6ND36 823 aa12.64□□□□□ -0.39
RNF220-206ENST00000453863 MYOM1P52179 1685 aa12.64□□□□□ -0.39
RNF220-206ENST00000453863 LMO7Q8WWI1 1683 aa12.64□□□□□ -0.39
RNF220-206ENST00000453863 GCP02774 474 aa12.63□□□□□ -0.39
RNF220-206ENST00000453863 ZC3H6P61129 1189 aaKnown RBP12.63□□□□□ -0.39
RNF220-206ENST00000453863 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.63□□□□□ -0.39
RNF220-206ENST00000453863 SLC12A5Q9H2X9 1139 aa12.63□□□□□ -0.39
RNF220-206ENST00000453863 USP31Q70CQ4 1352 aa12.62□□□□□ -0.39
RNF220-206ENST00000453863 A0A0G2JS52 829 aa12.62□□□□□ -0.39
RNF220-206ENST00000453863 MYT1Q01538 1121 aa12.62□□□□□ -0.39
RNF220-206ENST00000453863 KIF20BQ96Q89 1820 aa12.62□□□□□ -0.39
RNF220-206ENST00000453863 AATKQ6ZMQ8 1374 aa12.61□□□□□ -0.39
RNF220-206ENST00000453863 ZBTB7CA1YPR0 619 aa12.61□□□□□ -0.39
RNF220-206ENST00000453863 CHRNA2Q15822 529 aa12.61□□□□□ -0.39
RNF220-206ENST00000453863 NFAT5O94916 1531 aa12.61□□□□□ -0.39
RNF220-206ENST00000453863 EVA1CP58658 441 aa12.6□□□□□ -0.39
RNF220-206ENST00000453863 OVOS2A0A0J9YW53 1432 aa12.6□□□□□ -0.39
RNF220-206ENST00000453863 OVOS2Q6IE36 1432 aa12.6□□□□□ -0.39
RNF220-206ENST00000453863 LTN1O94822 1766 aa12.59□□□□□ -0.39
RNF220-206ENST00000453863 HSPA5P11021 654 aaKnown RBP12.59□□□□□ -0.39
RNF220-206ENST00000453863 STRN4Q9NRL3 753 aa12.59□□□□□ -0.39
RNF220-206ENST00000453863 COL5A2P05997 1499 aaPredicted RBP12.59□□□□□ -0.39
RNF220-206ENST00000453863 CAMTA1Q9Y6Y1 1673 aa12.58□□□□□ -0.4
RNF220-206ENST00000453863 SOX12O15370 315 aa12.58□□□□□ -0.4
RNF220-206ENST00000453863 NME9Q86XW9 330 aa12.58□□□□□ -0.4
RNF220-206ENST00000453863 COG3Q96JB2 828 aa12.58□□□□□ -0.4
RNF220-206ENST00000453863 SPATA31A5Q5VU36 1347 aa12.58□□□□□ -0.4
RNF220-206ENST00000453863 SPATA31A7Q8IWB4 1347 aa12.58□□□□□ -0.4
RNF220-206ENST00000453863 THSD7AQ9UPZ6 1657 aa12.57□□□□□ -0.4
RNF220-206ENST00000453863 CRB1P82279 1406 aa12.57□□□□□ -0.4
RNF220-206ENST00000453863 POLR3GLQ9BT43 218 aa12.57□□□□□ -0.4
RNF220-206ENST00000453863 FAM208AQ9UK61 1670 aaKnown RBP12.56□□□□□ -0.4
RNF220-206ENST00000453863 SPATA31A1Q5TZJ5 1347 aa12.56□□□□□ -0.4
RNF220-206ENST00000453863 COL18A1P39060 1754 aa12.56□□□□□ -0.4
RNF220-206ENST00000453863 BRWD3Q6RI45 1802 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms