RNA–Protein interactions for RNA: ENST00000452765.6

SH3BP2-204, Transcript of SH3 domain binding protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH3BP2, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-204ENST00000452765 USP6P35125 1406 aa28.17■■■□□ 2.1
SH3BP2-204ENST00000452765 TTC21BQ7Z4L5 1316 aa28.17■■■□□ 2.1
SH3BP2-204ENST00000452765 NSD2O96028 1365 aa28.15■■■□□ 2.1
SH3BP2-204ENST00000452765 HNRNPUQ00839 825 aaKnown RBP eCLIP28.15■■■□□ 2.1
SH3BP2-204ENST00000452765 POLR3AO14802 1390 aaPredicted RBP28.15■■■□□ 2.1
SH3BP2-204ENST00000452765 MTHFSP49914 203 aa28.15■■■□□ 2.1
SH3BP2-204ENST00000452765 XPCQ01831 940 aaPredicted RBP28.14■■■□□ 2.1
SH3BP2-204ENST00000452765 LRRC7Q96NW7 1537 aa28.13■■■□□ 2.09
SH3BP2-204ENST00000452765 ATF3P18847 181 aa28.13■■■□□ 2.09
SH3BP2-204ENST00000452765 NRKQ7Z2Y5 1582 aa28.12■■■□□ 2.09
SH3BP2-204ENST00000452765 ANKRD26Q9UPS8 1709 aa28.11■■■□□ 2.09
SH3BP2-204ENST00000452765 FOXO3O43524 673 aa28.11■■■□□ 2.09
SH3BP2-204ENST00000452765 NUTM2GQ5VZR2 741 aa28.11■■■□□ 2.09
SH3BP2-204ENST00000452765 DMRT2Q9Y5R5 561 aa28.11■■■□□ 2.09
SH3BP2-204ENST00000452765 SSH2Q76I76 1423 aa28.1■■■□□ 2.09
SH3BP2-204ENST00000452765 PAK3O75914 559 aaPredicted RBP28.09■■■□□ 2.09
SH3BP2-204ENST00000452765 MYT1Q01538 1121 aa28.09■■■□□ 2.09
SH3BP2-204ENST00000452765 DDX17Q92841 729 aaKnown RBP28.09■■■□□ 2.09
SH3BP2-204ENST00000452765 C1orf167Q5SNV9 1468 aa28.08■■■□□ 2.09
SH3BP2-204ENST00000452765 SOX12O15370 315 aa28.08■■■□□ 2.09
SH3BP2-204ENST00000452765 COG3Q96JB2 828 aa28.07■■■□□ 2.08
SH3BP2-204ENST00000452765 ADAMTS8Q9UP79 889 aa28.07■■■□□ 2.08
SH3BP2-204ENST00000452765 MSH6P52701 1360 aa28.06■■■□□ 2.08
SH3BP2-204ENST00000452765 MST1RQ04912 1400 aa28.06■■■□□ 2.08
SH3BP2-204ENST00000452765 PPM1GO15355 546 aaPredicted RBP28.06■■■□□ 2.08
SH3BP2-204ENST00000452765 PSME1Q06323 249 aa28.05■■■□□ 2.08
SH3BP2-204ENST00000452765 GTF3C3Q9Y5Q9 886 aa28.04■■■□□ 2.08
SH3BP2-204ENST00000452765 MAP2P11137 1827 aaKnown RBP28.04■■■□□ 2.08
SH3BP2-204ENST00000452765 PLEKHG5O94827 1062 aa28.03■■■□□ 2.08
SH3BP2-204ENST00000452765 RRS1Q15050 365 aaKnown RBP28.03■■■□□ 2.08
SH3BP2-204ENST00000452765 CADPS2Q86UW7 1296 aa28.02■■■□□ 2.08
SH3BP2-204ENST00000452765 EMILIN1Q9Y6C2 1016 aa28.02■■■□□ 2.08
SH3BP2-204ENST00000452765 NCOA3Q9Y6Q9 1424 aa28.02■■■□□ 2.08
SH3BP2-204ENST00000452765 POLKQ9UBT6 870 aa28.02■■■□□ 2.08
SH3BP2-204ENST00000452765 ABTB2Q8N961 1025 aa28■■■□□ 2.07
SH3BP2-204ENST00000452765 SALL2Q9Y467 1007 aaPredicted RBP28■■■□□ 2.07
SH3BP2-204ENST00000452765 WDR43Q15061 677 aaKnown RBP eCLIP27.99■■■□□ 2.07
SH3BP2-204ENST00000452765 PIK3C2AO00443 1686 aa27.99■■■□□ 2.07
SH3BP2-204ENST00000452765 NLRP6P59044 892 aa27.99■■■□□ 2.07
SH3BP2-204ENST00000452765 TTC21AQ8NDW8 1320 aa27.98■■■□□ 2.07
SH3BP2-204ENST00000452765 DCCP43146 1447 aa27.98■■■□□ 2.07
SH3BP2-204ENST00000452765 OVOS2A0A0J9YW53 1432 aa27.97■■■□□ 2.07
SH3BP2-204ENST00000452765 OVOS2Q6IE36 1432 aa27.97■■■□□ 2.07
SH3BP2-204ENST00000452765 CCDC146Q8IYE0 955 aa27.96■■■□□ 2.07
SH3BP2-204ENST00000452765 LMOD2Q6P5Q4 547 aa27.94■■■□□ 2.06
SH3BP2-204ENST00000452765 KRT28Q7Z3Y7 464 aa27.94■■■□□ 2.06
SH3BP2-204ENST00000452765 SHPRHQ149N8 1683 aa27.94■■■□□ 2.06
SH3BP2-204ENST00000452765 AEBP2Q6ZN18 517 aaPredicted RBP27.94■■■□□ 2.06
SH3BP2-204ENST00000452765 SLAIN2Q9P270 581 aa27.93■■■□□ 2.06
SH3BP2-204ENST00000452765 CFAP53Q96M91 514 aa27.92■■■□□ 2.06
SH3BP2-204ENST00000452765 BRINP3Q76B58 766 aa27.9■■■□□ 2.06
SH3BP2-204ENST00000452765 MARF1Q9Y4F3 1742 aaKnown RBP27.9■■■□□ 2.06
SH3BP2-204ENST00000452765 COL3A1P02461 1466 aaPredicted RBP27.88■■■□□ 2.05
SH3BP2-204ENST00000452765 USP31Q70CQ4 1352 aa27.88■■■□□ 2.05
SH3BP2-204ENST00000452765 U2SURPO15042 1029 aaKnown RBP27.87■■■□□ 2.05
SH3BP2-204ENST00000452765 AATKQ6ZMQ8 1374 aa27.87■■■□□ 2.05
SH3BP2-204ENST00000452765 LTBP4Q8N2S1 1624 aa27.87■■■□□ 2.05
SH3BP2-204ENST00000452765 KIF1AQ12756 1690 aa27.86■■■□□ 2.05
SH3BP2-204ENST00000452765 BLMP54132 1417 aaPredicted RBP27.86■■■□□ 2.05
SH3BP2-204ENST00000452765 U2AF1L5P0DN76 240 aaPredicted RBP27.85■■■□□ 2.05
SH3BP2-204ENST00000452765 U2AF1Q01081 240 aaKnown RBP eCLIP27.85■■■□□ 2.05
SH3BP2-204ENST00000452765 PNPLA6Q8IY17 1366 aa27.85■■■□□ 2.05
SH3BP2-204ENST00000452765 TRPM3Q9HCF6 1732 aaPredicted RBP27.84■■■□□ 2.05
SH3BP2-204ENST00000452765 MAP3K19Q56UN5 1328 aa27.84■■■□□ 2.05
SH3BP2-204ENST00000452765 ZBED9Q6R2W3 1325 aa27.84■■■□□ 2.05
SH3BP2-204ENST00000452765 DIAPH1O60610 1272 aaKnown RBP27.83■■■□□ 2.05
SH3BP2-204ENST00000452765 HSP90AB2PQ58FF8 381 aa27.83■■■□□ 2.04
SH3BP2-204ENST00000452765 PEAK1Q9H792 1746 aa27.82■■■□□ 2.04
SH3BP2-204ENST00000452765 NPHP3Q7Z494 1330 aa27.8■■■□□ 2.04
SH3BP2-204ENST00000452765 ZBTB7CA1YPR0 619 aa27.79■■■□□ 2.04
SH3BP2-204ENST00000452765 APAF1O14727 1248 aa27.79■■■□□ 2.04
SH3BP2-204ENST00000452765 SMG6Q86US8 1419 aaKnown RBP27.79■■■□□ 2.04
SH3BP2-204ENST00000452765 IL13P35225 146 aa27.77■■■□□ 2.04
SH3BP2-204ENST00000452765 CABLES1Q8TDN4 633 aa27.77■■■□□ 2.04
SH3BP2-204ENST00000452765 CDK12Q9NYV4 1490 aaPredicted RBP27.76■■■□□ 2.04
SH3BP2-204ENST00000452765 HMOX1P09601 288 aa27.76■■■□□ 2.03
SH3BP2-204ENST00000452765 NUDCQ9Y266 331 aa27.76■■■□□ 2.03
SH3BP2-204ENST00000452765 INSRP06213 1382 aa27.76■■■□□ 2.03
SH3BP2-204ENST00000452765 PXDNQ92626 1479 aa27.75■■■□□ 2.03
SH3BP2-204ENST00000452765 RRP7AQ9Y3A4 280 aaKnown RBP27.75■■■□□ 2.03
SH3BP2-204ENST00000452765 AMPHP49418 695 aa27.75■■■□□ 2.03
SH3BP2-204ENST00000452765 EIF4A2Q14240 407 aaKnown RBP27.74■■■□□ 2.03
SH3BP2-204ENST00000452765 NEUROD2Q15784 382 aa27.74■■■□□ 2.03
SH3BP2-204ENST00000452765 USP54Q70EL1 1684 aa27.73■■■□□ 2.03
SH3BP2-204ENST00000452765 GCP02774 474 aa27.73■■■□□ 2.03
SH3BP2-204ENST00000452765 ALS2Q96Q42 1657 aa27.73■■■□□ 2.03
SH3BP2-204ENST00000452765 CDCA7LQ96GN5 454 aa27.7■■■□□ 2.03
SH3BP2-204ENST00000452765 LTV1Q96GA3 475 aaPredicted RBP27.7■■■□□ 2.02
SH3BP2-204ENST00000452765 NFAT5O94916 1531 aa27.7■■■□□ 2.02
SH3BP2-204ENST00000452765 LTN1O94822 1766 aa27.7■■■□□ 2.02
SH3BP2-204ENST00000452765 SPATA31A3Q5VYP0 1347 aa27.69■■■□□ 2.02
SH3BP2-204ENST00000452765 RUNDC1Q96C34 613 aa27.69■■■□□ 2.02
SH3BP2-204ENST00000452765 HOXC9P31274 260 aa27.69■■■□□ 2.02
SH3BP2-204ENST00000452765 ZC3H6P61129 1189 aaKnown RBP27.69■■■□□ 2.02
SH3BP2-204ENST00000452765 TCP11L2Q8N4U5 519 aa27.69■■■□□ 2.02
SH3BP2-204ENST00000452765 SBNO1A3KN83 1393 aa27.68■■■□□ 2.02
SH3BP2-204ENST00000452765 PLEKHF1Q96S99 279 aa27.68■■■□□ 2.02
SH3BP2-204ENST00000452765 MED1Q15648 1581 aaPredicted RBP27.68■■■□□ 2.02
SH3BP2-204ENST00000452765 AEBP1Q8IUX7 1158 aa27.67■■■□□ 2.02
SH3BP2-204ENST00000452765 TNS3Q68CZ2 1445 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms