RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 SNRPBP14678 240 aaKnown RBP6.36□□□□□ -1.39
LRCH3-209ENST00000452660 PARP9Q8IXQ6 854 aa6.36□□□□□ -1.39
LRCH3-209ENST00000452660 ZBTB3Q9H5J0 574 aa6.36□□□□□ -1.39
LRCH3-209ENST00000452660 CAPN5O15484 640 aaPredicted RBP6.35□□□□□ -1.39
LRCH3-209ENST00000452660 F12P00748 615 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-209ENST00000452660 FAM174AQ8TBP5 190 aa6.34□□□□□ -1.39
LRCH3-209ENST00000452660 SLC16A10Q8TF71 515 aa6.34□□□□□ -1.39
LRCH3-209ENST00000452660 BAP1Q92560 729 aa6.34□□□□□ -1.39
LRCH3-209ENST00000452660 CDK15Q96Q40 435 aa6.34□□□□□ -1.39
LRCH3-209ENST00000452660 ARMC2Q8NEN0 867 aa6.33□□□□□ -1.4
LRCH3-209ENST00000452660 NXF1Q9UBU9 619 aaKnown RBP6.33□□□□□ -1.4
LRCH3-209ENST00000452660 HRCP23327 699 aa6.32□□□□□ -1.4
LRCH3-209ENST00000452660 TRIM46Q7Z4K8 759 aa6.32□□□□□ -1.4
LRCH3-209ENST00000452660 RIC3Q7Z5B4 369 aa6.32□□□□□ -1.4
LRCH3-209ENST00000452660 CFAP99D6REC4 459 aa6.31□□□□□ -1.4
LRCH3-209ENST00000452660 ADH1CP00326 375 aa6.31□□□□□ -1.4
LRCH3-209ENST00000452660 NR5A1Q13285 461 aa6.31□□□□□ -1.4
LRCH3-209ENST00000452660 CTHP32929 405 aa6.3□□□□□ -1.4
LRCH3-209ENST00000452660 NNTQ13423 1086 aa6.3□□□□□ -1.4
LRCH3-209ENST00000452660 BPHLQ86WA6 291 aaPredicted RBP6.3□□□□□ -1.4
LRCH3-209ENST00000452660 GPKOWQ92917 476 aaPredicted RBP eCLIP6.3□□□□□ -1.4
LRCH3-209ENST00000452660 IRF7Q92985 503 aa6.3□□□□□ -1.4
LRCH3-209ENST00000452660 KLF16Q9BXK1 252 aaPredicted RBP6.3□□□□□ -1.4
LRCH3-209ENST00000452660 PCDHB15Q9Y5E8 787 aa6.3□□□□□ -1.4
LRCH3-209ENST00000452660 LILRB3O75022 631 aa6.29□□□□□ -1.4
LRCH3-209ENST00000452660 LINC01559Q495D7 138 aa6.29□□□□□ -1.4
LRCH3-209ENST00000452660 RSPH6AQ9H0K4 717 aa6.29□□□□□ -1.4
LRCH3-209ENST00000452660 MAP4K5Q9Y4K4 846 aa6.29□□□□□ -1.4
LRCH3-209ENST00000452660 TLL2Q9Y6L7 1015 aa6.29□□□□□ -1.4
LRCH3-209ENST00000452660 FAM181BA6NEQ2 426 aa6.28□□□□□ -1.4
LRCH3-209ENST00000452660 H3BM21 787 aa6.28□□□□□ -1.4
LRCH3-209ENST00000452660 TIMP2P16035 220 aa6.28□□□□□ -1.4
LRCH3-209ENST00000452660 PDE4DQ08499 809 aa6.28□□□□□ -1.4
LRCH3-209ENST00000452660 SCARF1Q14162 830 aa6.28□□□□□ -1.4
LRCH3-209ENST00000452660 NBPF14Q5TI25 921 aa6.28□□□□□ -1.4
LRCH3-209ENST00000452660 MYSM1Q5VVJ2 828 aa6.28□□□□□ -1.4
LRCH3-209ENST00000452660 MRPL14Q6P1L8 145 aaKnown RBP6.28□□□□□ -1.4
LRCH3-209ENST00000452660 TRMT44Q8IYL2 757 aaKnown RBP6.28□□□□□ -1.4
LRCH3-209ENST00000452660 C1QTNF2Q9BXJ5 285 aa6.28□□□□□ -1.4
LRCH3-209ENST00000452660 LCE2CQ5TA81 110 aa6.27□□□□□ -1.41
LRCH3-209ENST00000452660 HELBQ8NG08 1087 aaPredicted RBP6.27□□□□□ -1.41
LRCH3-209ENST00000452660 BMP1P13497 986 aa6.26□□□□□ -1.41
LRCH3-209ENST00000452660 WDR4P57081 412 aaKnown RBP6.26□□□□□ -1.41
LRCH3-209ENST00000452660 SH3RF1Q7Z6J0 888 aa6.26□□□□□ -1.41
LRCH3-209ENST00000452660 ZFP42Q96MM3 310 aa6.26□□□□□ -1.41
LRCH3-209ENST00000452660 MAP10Q9P2G4 905 aa6.26□□□□□ -1.41
LRCH3-209ENST00000452660 VSIG8P0DPA2 414 aa6.25□□□□□ -1.41
LRCH3-209ENST00000452660 FOXJ1Q92949 421 aa6.25□□□□□ -1.41
LRCH3-209ENST00000452660 NUTM2BA6NNL0 878 aaPredicted RBP6.24□□□□□ -1.41
LRCH3-209ENST00000452660 NUTM2EB1AL46 878 aaPredicted RBP6.24□□□□□ -1.41
LRCH3-209ENST00000452660 GRM5P41594 1212 aa6.24□□□□□ -1.41
LRCH3-209ENST00000452660 CLK2P49760 499 aaKnown RBP6.24□□□□□ -1.41
LRCH3-209ENST00000452660 NUTM2DQ5VT03 806 aaPredicted RBP6.24□□□□□ -1.41
LRCH3-209ENST00000452660 NUTM2AQ8IVF1 878 aaPredicted RBP6.24□□□□□ -1.41
LRCH3-209ENST00000452660 CABLES1Q8TDN4 633 aa6.24□□□□□ -1.41
LRCH3-209ENST00000452660 LIMD1Q9UGP4 676 aa6.24□□□□□ -1.41
LRCH3-209ENST00000452660 CDV3Q9UKY7 258 aaKnown RBP6.24□□□□□ -1.41
LRCH3-209ENST00000452660 ZC3H4Q9UPT8 1303 aaKnown RBP6.24□□□□□ -1.41
LRCH3-209ENST00000452660 SH3BP5LQ7L8J4 393 aa6.23□□□□□ -1.41
LRCH3-209ENST00000452660 PER1O15534 1290 aaPredicted RBP6.22□□□□□ -1.41
LRCH3-209ENST00000452660 AGERQ15109 404 aa6.22□□□□□ -1.41
LRCH3-209ENST00000452660 QPCTQ16769 361 aa6.22□□□□□ -1.41
LRCH3-209ENST00000452660 C4orf48Q5BLP8 95 aa6.22□□□□□ -1.41
LRCH3-209ENST00000452660 EMILIN1Q9Y6C2 1016 aa6.22□□□□□ -1.41
LRCH3-209ENST00000452660 UPP2O95045 317 aa6.21□□□□□ -1.42
LRCH3-209ENST00000452660 ZIC2O95409 532 aaPredicted RBP6.21□□□□□ -1.42
LRCH3-209ENST00000452660 GMPRP36959 345 aa6.21□□□□□ -1.42
LRCH3-209ENST00000452660 PDXDC2PQ6P474 469 aa6.21□□□□□ -1.42
LRCH3-209ENST00000452660 MEIOBQ8N635 442 aa6.21□□□□□ -1.42
LRCH3-209ENST00000452660 NR3C2P08235 984 aa6.2□□□□□ -1.42
LRCH3-209ENST00000452660 PPP2R2DQ66LE6 453 aa6.2□□□□□ -1.42
LRCH3-209ENST00000452660 ZSCAN1Q8NBB4 408 aa6.2□□□□□ -1.42
LRCH3-209ENST00000452660 ITPKCQ96DU7 683 aa6.2□□□□□ -1.42
LRCH3-209ENST00000452660 PURBQ96QR8 312 aaKnown RBP6.2□□□□□ -1.42
LRCH3-209ENST00000452660 GPSM3Q9Y4H4 160 aa6.2□□□□□ -1.42
LRCH3-209ENST00000452660 LORP23490 312 aaPredicted RBP6.19□□□□□ -1.42
LRCH3-209ENST00000452660 ARID5BQ14865 1188 aa6.19□□□□□ -1.42
LRCH3-209ENST00000452660 SKIV2LQ15477 1246 aaKnown RBP6.19□□□□□ -1.42
LRCH3-209ENST00000452660 CSPP1Q1MSJ5 1256 aa6.19□□□□□ -1.42
LRCH3-209ENST00000452660 TSEN34Q9BSV6 310 aaKnown RBP6.19□□□□□ -1.42
LRCH3-209ENST00000452660 SLC24A3Q9HC58 644 aa6.19□□□□□ -1.42
LRCH3-209ENST00000452660 SH3D19Q5HYK7 790 aa6.18□□□□□ -1.42
LRCH3-209ENST00000452660 RTL5Q5HYW3 569 aaPredicted RBP6.18□□□□□ -1.42
LRCH3-209ENST00000452660 CCDC116Q8IYX3 515 aa6.18□□□□□ -1.42
LRCH3-209ENST00000452660 LINC00528Q8N1L1 170 aa6.18□□□□□ -1.42
LRCH3-209ENST00000452660 ZFAND3Q9H8U3 227 aa6.18□□□□□ -1.42
LRCH3-209ENST00000452660 DHX9Q08211 1270 aaKnown RBP6.17□□□□□ -1.42
LRCH3-209ENST00000452660 VASH1Q7L8A9 365 aaPredicted RBP6.17□□□□□ -1.42
LRCH3-209ENST00000452660 TRIM52Q96A61 297 aa6.17□□□□□ -1.42
LRCH3-209ENST00000452660 DDRGK1Q96HY6 314 aa6.17□□□□□ -1.42
LRCH3-209ENST00000452660 PGPEP1Q9NXJ5 209 aa6.17□□□□□ -1.42
LRCH3-209ENST00000452660 SOS2Q07890 1332 aaPredicted RBP6.17□□□□□ -1.42
LRCH3-209ENST00000452660 ERBB4Q15303 1308 aa6.17□□□□□ -1.42
LRCH3-209ENST00000452660 MAN1A2O60476 641 aa6.16□□□□□ -1.42
LRCH3-209ENST00000452660 FSHRP23945 695 aa6.16□□□□□ -1.42
LRCH3-209ENST00000452660 ERFEQ4G0M1 354 aa6.16□□□□□ -1.42
LRCH3-209ENST00000452660 Q6ZVU0 165 aa6.16□□□□□ -1.42
LRCH3-209ENST00000452660 PNMA1Q8ND90 353 aa6.16□□□□□ -1.42
LRCH3-209ENST00000452660 TSC1Q92574 1164 aa6.16□□□□□ -1.42
LRCH3-209ENST00000452660 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms