RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 GJD4Q96KN9 370 aaPredicted RBP17.97■□□□□ 0.47
CPSF4-208ENST00000452047 PLEKHG5O94827 1062 aa17.96■□□□□ 0.47
CPSF4-208ENST00000452047 CCDC61Q9Y6R9 512 aa17.96■□□□□ 0.47
CPSF4-208ENST00000452047 PHRF1Q9P1Y6 1649 aaKnown RBP17.96■□□□□ 0.47
CPSF4-208ENST00000452047 COL14A1Q05707 1796 aaKnown RBP17.96■□□□□ 0.47
CPSF4-208ENST00000452047 ATAD2Q6PL18 1390 aa17.94■□□□□ 0.46
CPSF4-208ENST00000452047 PLEKHG3A1L390 1219 aa17.94■□□□□ 0.46
CPSF4-208ENST00000452047 ACEP12821 1306 aa17.94■□□□□ 0.46
CPSF4-208ENST00000452047 ROCK2O75116 1388 aaKnown RBP17.93■□□□□ 0.46
CPSF4-208ENST00000452047 FAM83GA6ND36 823 aa17.93■□□□□ 0.46
CPSF4-208ENST00000452047 PAK3O75914 559 aaPredicted RBP17.93■□□□□ 0.46
CPSF4-208ENST00000452047 BRWD3Q6RI45 1802 aa17.93■□□□□ 0.46
CPSF4-208ENST00000452047 PPIP5K1Q6PFW1 1433 aa17.92■□□□□ 0.46
CPSF4-208ENST00000452047 SRPK2P78362 688 aaKnown RBP17.91■□□□□ 0.46
CPSF4-208ENST00000452047 VPS72Q15906 364 aa17.91■□□□□ 0.46
CPSF4-208ENST00000452047 NBPF8Q3BBV2 869 aa17.91■□□□□ 0.46
CPSF4-208ENST00000452047 TRIM26Q12899 539 aaPredicted RBP17.9■□□□□ 0.46
CPSF4-208ENST00000452047 CABP2Q9NPB3 220 aa17.9■□□□□ 0.46
CPSF4-208ENST00000452047 NRKQ7Z2Y5 1582 aa17.89■□□□□ 0.45
CPSF4-208ENST00000452047 BTG4Q9NY30 223 aa17.87■□□□□ 0.45
CPSF4-208ENST00000452047 ONECUT3O60422 494 aaPredicted RBP17.86■□□□□ 0.45
CPSF4-208ENST00000452047 KIAA0232Q92628 1395 aa17.86■□□□□ 0.45
CPSF4-208ENST00000452047 USP6P35125 1406 aa17.85■□□□□ 0.45
CPSF4-208ENST00000452047 EVC2Q86UK5 1308 aa17.85■□□□□ 0.45
CPSF4-208ENST00000452047 TONSLQ96HA7 1378 aa17.85■□□□□ 0.45
CPSF4-208ENST00000452047 AKAP12Q02952 1782 aa17.84■□□□□ 0.45
CPSF4-208ENST00000452047 BRD4O60885 1362 aaPredicted RBP17.84■□□□□ 0.45
CPSF4-208ENST00000452047 SBNO2Q9Y2G9 1366 aa17.84■□□□□ 0.45
CPSF4-208ENST00000452047 USP19O94966 1318 aa17.84■□□□□ 0.45
CPSF4-208ENST00000452047 NUTM2GQ5VZR2 741 aa17.84■□□□□ 0.45
CPSF4-208ENST00000452047 PRDM11Q9NQV5 511 aa17.84■□□□□ 0.45
CPSF4-208ENST00000452047 SSH2Q76I76 1423 aa17.83■□□□□ 0.45
CPSF4-208ENST00000452047 SEPT12Q8IYM1 358 aa17.83■□□□□ 0.44
CPSF4-208ENST00000452047 CABP1Q9NZU7 370 aa17.83■□□□□ 0.44
CPSF4-208ENST00000452047 CCDC9Q9Y3X0 531 aaKnown RBP17.83■□□□□ 0.44
CPSF4-208ENST00000452047 PIK3C2AO00443 1686 aa17.83■□□□□ 0.44
CPSF4-208ENST00000452047 LMO7Q8WWI1 1683 aa17.83■□□□□ 0.44
CPSF4-208ENST00000452047 ABTB2Q8N961 1025 aa17.82■□□□□ 0.44
CPSF4-208ENST00000452047 THSD7AQ9UPZ6 1657 aa17.82■□□□□ 0.44
CPSF4-208ENST00000452047 SRCAPQ6ZRS2 3230 aa17.81■□□□□ 0.44
CPSF4-208ENST00000452047 CPDO75976 1380 aa17.8■□□□□ 0.44
CPSF4-208ENST00000452047 SPATA31A5Q5VU36 1347 aa17.8■□□□□ 0.44
CPSF4-208ENST00000452047 SPATA31A7Q8IWB4 1347 aa17.8■□□□□ 0.44
CPSF4-208ENST00000452047 ZC3H6P61129 1189 aaKnown RBP17.8■□□□□ 0.44
CPSF4-208ENST00000452047 CHRNA2Q15822 529 aa17.8■□□□□ 0.44
CPSF4-208ENST00000452047 SLIT3O75094 1523 aa17.8■□□□□ 0.44
CPSF4-208ENST00000452047 CARD11Q9BXL7 1154 aa17.79■□□□□ 0.44
CPSF4-208ENST00000452047 CAMTA1Q9Y6Y1 1673 aa17.79■□□□□ 0.44
CPSF4-208ENST00000452047 FAM98CQ17RN3 349 aaKnown RBP17.78■□□□□ 0.44
CPSF4-208ENST00000452047 NLRP13Q86W25 1043 aa17.78■□□□□ 0.44
CPSF4-208ENST00000452047 CCDC125Q86Z20 511 aa17.78■□□□□ 0.44
CPSF4-208ENST00000452047 MON2Q7Z3U7 1717 aa17.78■□□□□ 0.44
CPSF4-208ENST00000452047 BLMP54132 1417 aaPredicted RBP17.77■□□□□ 0.44
CPSF4-208ENST00000452047 CPSF1Q10570 1443 aaKnown RBP17.77■□□□□ 0.44
CPSF4-208ENST00000452047 GCP02774 474 aa17.76■□□□□ 0.43
CPSF4-208ENST00000452047 KRT27Q7Z3Y8 459 aa17.76■□□□□ 0.43
CPSF4-208ENST00000452047 SPATA31A1Q5TZJ5 1347 aa17.75■□□□□ 0.43
CPSF4-208ENST00000452047 A0A0G2JS52 829 aa17.73■□□□□ 0.43
CPSF4-208ENST00000452047 MYT1Q01538 1121 aa17.73■□□□□ 0.43
CPSF4-208ENST00000452047 ZNF692Q9BU19 519 aaPredicted RBP17.73■□□□□ 0.43
CPSF4-208ENST00000452047 STRN4Q9NRL3 753 aa17.73■□□□□ 0.43
CPSF4-208ENST00000452047 COL5A2P05997 1499 aaPredicted RBP17.73■□□□□ 0.43
CPSF4-208ENST00000452047 CD163L1Q9NR16 1453 aa17.73■□□□□ 0.43
CPSF4-208ENST00000452047 COL18A1P39060 1754 aa17.73■□□□□ 0.43
CPSF4-208ENST00000452047 TTC21BQ7Z4L5 1316 aa17.72■□□□□ 0.43
CPSF4-208ENST00000452047 USP54Q70EL1 1684 aa17.72■□□□□ 0.43
CPSF4-208ENST00000452047 NLRP6P59044 892 aa17.72■□□□□ 0.43
CPSF4-208ENST00000452047 TTC21AQ8NDW8 1320 aa17.71■□□□□ 0.42
CPSF4-208ENST00000452047 KTN1Q86UP2 1357 aaKnown RBP17.7■□□□□ 0.42
CPSF4-208ENST00000452047 RGPD1P0DJD0 1748 aa17.69■□□□□ 0.42
CPSF4-208ENST00000452047 AATKQ6ZMQ8 1374 aa17.69■□□□□ 0.42
CPSF4-208ENST00000452047 NFAT5O94916 1531 aa17.69■□□□□ 0.42
CPSF4-208ENST00000452047 LARP1Q6PKG0 1096 aaKnown RBP17.69■□□□□ 0.42
CPSF4-208ENST00000452047 TESK2Q96S53 571 aa17.68■□□□□ 0.42
CPSF4-208ENST00000452047 TNS1Q9HBL0 1735 aaKnown RBP17.68■□□□□ 0.42
CPSF4-208ENST00000452047 PARP4Q9UKK3 1724 aaKnown RBP17.67■□□□□ 0.42
CPSF4-208ENST00000452047 EVA1CP58658 441 aa17.67■□□□□ 0.42
CPSF4-208ENST00000452047 BARGINQ6ZT62 677 aa17.67■□□□□ 0.42
CPSF4-208ENST00000452047 RGPD5Q99666 1765 aa17.66■□□□□ 0.42
CPSF4-208ENST00000452047 FAM182BQ5T319 152 aa17.66■□□□□ 0.42
CPSF4-208ENST00000452047 DEFB132Q7Z7B7 95 aa17.66■□□□□ 0.42
CPSF4-208ENST00000452047 PUS7Q96PZ0 661 aaKnown RBP17.66■□□□□ 0.42
CPSF4-208ENST00000452047 USP35Q9P2H5 1018 aa17.66■□□□□ 0.42
CPSF4-208ENST00000452047 WNK3Q9BYP7 1800 aa17.65■□□□□ 0.42
CPSF4-208ENST00000452047 CRB1P82279 1406 aa17.65■□□□□ 0.42
CPSF4-208ENST00000452047 ST20-MTHFSA0A0A6YYL1 179 aa17.65■□□□□ 0.42
CPSF4-208ENST00000452047 ABCC6O95255 1503 aa17.64■□□□□ 0.41
CPSF4-208ENST00000452047 SF3B2Q13435 895 aaKnown RBP17.64■□□□□ 0.41
CPSF4-208ENST00000452047 ARHGEF25Q86VW2 580 aa17.64■□□□□ 0.41
CPSF4-208ENST00000452047 TCP11L2Q8N4U5 519 aa17.64■□□□□ 0.41
CPSF4-208ENST00000452047 SLC12A5Q9H2X9 1139 aa17.64■□□□□ 0.41
CPSF4-208ENST00000452047 A0A1W2PP64 1363 aa17.64■□□□□ 0.41
CPSF4-208ENST00000452047 USP31Q70CQ4 1352 aa17.64■□□□□ 0.41
CPSF4-208ENST00000452047 EDC4Q6P2E9 1401 aaKnown RBP17.64■□□□□ 0.41
CPSF4-208ENST00000452047 KCNH5Q8NCM2 988 aa17.63■□□□□ 0.41
CPSF4-208ENST00000452047 THRAP3Q9Y2W1 955 aaKnown RBP17.63■□□□□ 0.41
CPSF4-208ENST00000452047 LRRC37A3O60309 1634 aa17.62■□□□□ 0.41
CPSF4-208ENST00000452047 ZBTB7CA1YPR0 619 aa17.62■□□□□ 0.41
CPSF4-208ENST00000452047 TMC1Q8TDI8 760 aa17.62■□□□□ 0.41
CPSF4-208ENST00000452047 ZRANB1Q9UGI0 708 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms