RNA–Protein interactions for RNA: ENST00000451943.6

DDB1-203, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,224 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-203ENST00000451943 NCOA3Q9Y6Q9 1424 aa11.35□□□□□ -0.59
DDB1-203ENST00000451943 PIK3R4Q99570 1358 aa11.34□□□□□ -0.59
DDB1-203ENST00000451943 TRMT2AQ8IZ69 625 aaKnown RBP11.34□□□□□ -0.59
DDB1-203ENST00000451943 CFAP53Q96M91 514 aa11.34□□□□□ -0.59
DDB1-203ENST00000451943 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
DDB1-203ENST00000451943 AMOTL2Q9Y2J4 779 aa11.34□□□□□ -0.59
DDB1-203ENST00000451943 SALL2Q9Y467 1007 aaPredicted RBP11.34□□□□□ -0.59
DDB1-203ENST00000451943 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
DDB1-203ENST00000451943 WASLO00401 505 aaPredicted RBP11.33□□□□□ -0.6
DDB1-203ENST00000451943 FYB1O15117 783 aa11.33□□□□□ -0.6
DDB1-203ENST00000451943 MTHFSP49914 203 aa11.33□□□□□ -0.6
DDB1-203ENST00000451943 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
DDB1-203ENST00000451943 DUSP27Q5VZP5 1158 aa11.33□□□□□ -0.6
DDB1-203ENST00000451943 WAPLQ7Z5K2 1190 aa11.33□□□□□ -0.6
DDB1-203ENST00000451943 C19orf44Q9H6X5 657 aa11.33□□□□□ -0.6
DDB1-203ENST00000451943 SLFN5Q08AF3 891 aa11.32□□□□□ -0.6
DDB1-203ENST00000451943 ROBO1Q9Y6N7 1651 aa11.32□□□□□ -0.6
DDB1-203ENST00000451943 CPSF1Q10570 1443 aaKnown RBP11.32□□□□□ -0.6
DDB1-203ENST00000451943 ADGRB2O60241 1585 aa11.32□□□□□ -0.6
DDB1-203ENST00000451943 APAF1O14727 1248 aa11.31□□□□□ -0.6
DDB1-203ENST00000451943 RUNDC1Q96C34 613 aa11.31□□□□□ -0.6
DDB1-203ENST00000451943 CABP1Q9NZU7 370 aa11.31□□□□□ -0.6
DDB1-203ENST00000451943 PTPRUQ92729 1446 aa11.31□□□□□ -0.6
DDB1-203ENST00000451943 PNPLA6Q8IY17 1366 aa11.3□□□□□ -0.6
DDB1-203ENST00000451943 DIP2AQ14689 1571 aa11.3□□□□□ -0.6
DDB1-203ENST00000451943 CDC42BPGQ6DT37 1551 aa11.3□□□□□ -0.6
DDB1-203ENST00000451943 CADPS2Q86UW7 1296 aa11.3□□□□□ -0.6
DDB1-203ENST00000451943 COL3A1P02461 1466 aaPredicted RBP11.3□□□□□ -0.6
DDB1-203ENST00000451943 EDC4Q6P2E9 1401 aaKnown RBP11.29□□□□□ -0.6
DDB1-203ENST00000451943 E9PSI1 815 aa11.29□□□□□ -0.6
DDB1-203ENST00000451943 CCDC27Q2M243 656 aa11.29□□□□□ -0.6
DDB1-203ENST00000451943 C14orf37Q86TY3 774 aa11.29□□□□□ -0.6
DDB1-203ENST00000451943 CCDC146Q8IYE0 955 aa11.29□□□□□ -0.6
DDB1-203ENST00000451943 ROBO2Q9HCK4 1378 aa11.28□□□□□ -0.6
DDB1-203ENST00000451943 KIF20BQ96Q89 1820 aa11.28□□□□□ -0.6
DDB1-203ENST00000451943 PPIP5K1Q6PFW1 1433 aa11.28□□□□□ -0.6
DDB1-203ENST00000451943 ATF3P18847 181 aa11.28□□□□□ -0.6
DDB1-203ENST00000451943 TNNT2P45379 298 aaPredicted RBP11.28□□□□□ -0.6
DDB1-203ENST00000451943 GGNBP2Q9H3C7 697 aa11.28□□□□□ -0.6
DDB1-203ENST00000451943 CCDC61Q9Y6R9 512 aa11.28□□□□□ -0.6
DDB1-203ENST00000451943 PTCH1Q13635 1447 aa11.27□□□□□ -0.6
DDB1-203ENST00000451943 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.27□□□□□ -0.61
DDB1-203ENST00000451943 B4GALNT3Q6L9W6 998 aa11.27□□□□□ -0.61
DDB1-203ENST00000451943 POTEAQ6S8J7 498 aa11.27□□□□□ -0.61
DDB1-203ENST00000451943 NUDT16Q96DE0 195 aaKnown RBP11.27□□□□□ -0.61
DDB1-203ENST00000451943 WDR63Q8IWG1 891 aa11.26□□□□□ -0.61
DDB1-203ENST00000451943 WWC1Q8IX03 1113 aa11.26□□□□□ -0.61
DDB1-203ENST00000451943 ZNF692Q9BU19 519 aaPredicted RBP11.26□□□□□ -0.61
DDB1-203ENST00000451943 JCADQ9P266 1359 aa11.26□□□□□ -0.61
DDB1-203ENST00000451943 BRINP3Q76B58 766 aa11.25□□□□□ -0.61
DDB1-203ENST00000451943 TCP11L2Q8N4U5 519 aa11.25□□□□□ -0.61
DDB1-203ENST00000451943 PHLPP1O60346 1717 aa11.25□□□□□ -0.61
DDB1-203ENST00000451943 MON2Q7Z3U7 1717 aa11.25□□□□□ -0.61
DDB1-203ENST00000451943 AATKQ6ZMQ8 1374 aa11.25□□□□□ -0.61
DDB1-203ENST00000451943 AKAP12Q02952 1782 aa11.24□□□□□ -0.61
DDB1-203ENST00000451943 PLEKHG3A1L390 1219 aa11.24□□□□□ -0.61
DDB1-203ENST00000451943 CCDC136Q96JN2 1154 aa11.24□□□□□ -0.61
DDB1-203ENST00000451943 PRR36Q9H6K5 1346 aa11.24□□□□□ -0.61
DDB1-203ENST00000451943 TOPAZ1Q8N9V7 1692 aa11.24□□□□□ -0.61
DDB1-203ENST00000451943 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.23□□□□□ -0.61
DDB1-203ENST00000451943 EXOC6Q8TAG9 804 aa11.23□□□□□ -0.61
DDB1-203ENST00000451943 PLEKHF1Q96S99 279 aa11.23□□□□□ -0.61
DDB1-203ENST00000451943 PNNQ9H307 717 aaKnown RBP11.23□□□□□ -0.61
DDB1-203ENST00000451943 SPINK5Q9NQ38 1064 aaPredicted RBP11.23□□□□□ -0.61
DDB1-203ENST00000451943 XRN1Q8IZH2 1706 aaKnown RBP11.23□□□□□ -0.61
DDB1-203ENST00000451943 DIAPH1O60610 1272 aaKnown RBP11.22□□□□□ -0.61
DDB1-203ENST00000451943 U2AF1L5P0DN76 240 aaPredicted RBP11.22□□□□□ -0.61
DDB1-203ENST00000451943 DCCP43146 1447 aa11.22□□□□□ -0.61
DDB1-203ENST00000451943 U2AF1Q01081 240 aaKnown RBP eCLIP11.22□□□□□ -0.61
DDB1-203ENST00000451943 COL16A1Q07092 1604 aaPredicted RBP11.22□□□□□ -0.61
DDB1-203ENST00000451943 SPATA31A6Q5VVP1 1343 aa11.21□□□□□ -0.61
DDB1-203ENST00000451943 PIAS4Q8N2W9 510 aaPredicted RBP11.21□□□□□ -0.61
DDB1-203ENST00000451943 POLKQ9UBT6 870 aa11.21□□□□□ -0.61
DDB1-203ENST00000451943 ITSN1Q15811 1721 aa11.21□□□□□ -0.62
DDB1-203ENST00000451943 AHDC1Q5TGY3 1603 aaPredicted RBP11.2□□□□□ -0.62
DDB1-203ENST00000451943 NRKQ7Z2Y5 1582 aa11.2□□□□□ -0.62
DDB1-203ENST00000451943 CDK12Q9NYV4 1490 aaPredicted RBP11.2□□□□□ -0.62
DDB1-203ENST00000451943 MST1RQ04912 1400 aa11.2□□□□□ -0.62
DDB1-203ENST00000451943 FCHSD2O94868 740 aa11.2□□□□□ -0.62
DDB1-203ENST00000451943 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.2□□□□□ -0.62
DDB1-203ENST00000451943 SSH2Q76I76 1423 aa11.19□□□□□ -0.62
DDB1-203ENST00000451943 ADGRL3Q9HAR2 1447 aa11.18□□□□□ -0.62
DDB1-203ENST00000451943 IL16Q14005 1332 aa11.18□□□□□ -0.62
DDB1-203ENST00000451943 PLIN1O60240 522 aa11.18□□□□□ -0.62
DDB1-203ENST00000451943 CT47B1P0C2W7 299 aaPredicted RBP11.18□□□□□ -0.62
DDB1-203ENST00000451943 TMPOP42166 694 aaKnown RBP11.18□□□□□ -0.62
DDB1-203ENST00000451943 NME9Q86XW9 330 aa11.18□□□□□ -0.62
DDB1-203ENST00000451943 COG3Q96JB2 828 aa11.18□□□□□ -0.62
DDB1-203ENST00000451943 CRBNQ96SW2 442 aa11.18□□□□□ -0.62
DDB1-203ENST00000451943 RBM19Q9Y4C8 960 aaKnown RBP11.18□□□□□ -0.62
DDB1-203ENST00000451943 USP6P35125 1406 aa11.18□□□□□ -0.62
DDB1-203ENST00000451943 ANKARQ7Z5J8 1434 aa11.18□□□□□ -0.62
DDB1-203ENST00000451943 LRP6O75581 1613 aa11.17□□□□□ -0.62
DDB1-203ENST00000451943 TTC21BQ7Z4L5 1316 aa11.17□□□□□ -0.62
DDB1-203ENST00000451943 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
DDB1-203ENST00000451943 DDX17Q92841 729 aaKnown RBP11.17□□□□□ -0.62
DDB1-203ENST00000451943 LRRC59Q96AG4 307 aaKnown RBP11.17□□□□□ -0.62
DDB1-203ENST00000451943 MYH16Q9H6N6 1097 aa11.17□□□□□ -0.62
DDB1-203ENST00000451943 OVOS2A0A0J9YW53 1432 aa11.17□□□□□ -0.62
DDB1-203ENST00000451943 OVOS2Q6IE36 1432 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms