RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 QRICH2Q9H0J4 1663 aa30.96■■■□□ 2.55
C9orf3-208ENST00000451893 RALGAPBQ86X10 1494 aa30.95■■■□□ 2.55
C9orf3-208ENST00000451893 A0A0G2JS52 829 aa30.94■■■□□ 2.54
C9orf3-208ENST00000451893 MYT1Q01538 1121 aa30.94■■■□□ 2.54
C9orf3-208ENST00000451893 TOPAZ1Q8N9V7 1692 aa30.93■■■□□ 2.54
C9orf3-208ENST00000451893 ROCK2O75116 1388 aaKnown RBP30.92■■■□□ 2.54
C9orf3-208ENST00000451893 VPS72Q15906 364 aa30.91■■■□□ 2.54
C9orf3-208ENST00000451893 ACEP12821 1306 aa30.91■■■□□ 2.54
C9orf3-208ENST00000451893 GLI3P10071 1580 aa30.91■■■□□ 2.54
C9orf3-208ENST00000451893 TRPM1Q7Z4N2 1603 aa30.91■■■□□ 2.54
C9orf3-208ENST00000451893 FAM83GA6ND36 823 aa30.9■■■□□ 2.54
C9orf3-208ENST00000451893 COL14A1Q05707 1796 aaKnown RBP30.89■■■□□ 2.54
C9orf3-208ENST00000451893 BTG4Q9NY30 223 aa30.89■■■□□ 2.54
C9orf3-208ENST00000451893 CABP2Q9NPB3 220 aa30.88■■■□□ 2.53
C9orf3-208ENST00000451893 PRDM11Q9NQV5 511 aa30.88■■■□□ 2.53
C9orf3-208ENST00000451893 NUTM2GQ5VZR2 741 aa30.87■■■□□ 2.53
C9orf3-208ENST00000451893 PPIP5K1Q6PFW1 1433 aa30.87■■■□□ 2.53
C9orf3-208ENST00000451893 NBPF8Q3BBV2 869 aa30.86■■■□□ 2.53
C9orf3-208ENST00000451893 POLR3AO14802 1390 aaPredicted RBP30.85■■■□□ 2.53
C9orf3-208ENST00000451893 PLEKHG3A1L390 1219 aa30.84■■■□□ 2.53
C9orf3-208ENST00000451893 EVC2Q86UK5 1308 aa30.83■■■□□ 2.53
C9orf3-208ENST00000451893 SEPT12Q8IYM1 358 aa30.83■■■□□ 2.53
C9orf3-208ENST00000451893 ABTB2Q8N961 1025 aa30.83■■■□□ 2.53
C9orf3-208ENST00000451893 CRYBG1Q9Y4K1 1723 aa30.82■■■□□ 2.52
C9orf3-208ENST00000451893 NRAPQ86VF7 1730 aa30.81■■■□□ 2.52
C9orf3-208ENST00000451893 TONSLQ96HA7 1378 aa30.81■■■□□ 2.52
C9orf3-208ENST00000451893 PHRF1Q9P1Y6 1649 aaKnown RBP30.81■■■□□ 2.52
C9orf3-208ENST00000451893 BRWD3Q6RI45 1802 aa30.81■■■□□ 2.52
C9orf3-208ENST00000451893 CCDC125Q86Z20 511 aa30.8■■■□□ 2.52
C9orf3-208ENST00000451893 ZC3H6P61129 1189 aaKnown RBP30.78■■■□□ 2.52
C9orf3-208ENST00000451893 SF3B2Q13435 895 aaKnown RBP30.78■■■□□ 2.52
C9orf3-208ENST00000451893 KIAA0232Q92628 1395 aa30.78■■■□□ 2.52
C9orf3-208ENST00000451893 FAM98CQ17RN3 349 aaKnown RBP30.76■■■□□ 2.51
C9orf3-208ENST00000451893 CHRNA2Q15822 529 aa30.75■■■□□ 2.51
C9orf3-208ENST00000451893 STRN4Q9NRL3 753 aa30.75■■■□□ 2.51
C9orf3-208ENST00000451893 CABP1Q9NZU7 370 aa30.75■■■□□ 2.51
C9orf3-208ENST00000451893 KRT27Q7Z3Y8 459 aa30.74■■■□□ 2.51
C9orf3-208ENST00000451893 NLRP13Q86W25 1043 aa30.74■■■□□ 2.51
C9orf3-208ENST00000451893 EVA1CP58658 441 aa30.72■■■□□ 2.51
C9orf3-208ENST00000451893 CARD11Q9BXL7 1154 aa30.71■■■□□ 2.51
C9orf3-208ENST00000451893 BRD4O60885 1362 aaPredicted RBP30.7■■■□□ 2.51
C9orf3-208ENST00000451893 ZBTB7CA1YPR0 619 aa30.69■■■□□ 2.5
C9orf3-208ENST00000451893 NRKQ7Z2Y5 1582 aa30.68■■■□□ 2.5
C9orf3-208ENST00000451893 BLMP54132 1417 aaPredicted RBP30.68■■■□□ 2.5
C9orf3-208ENST00000451893 ONECUT3O60422 494 aaPredicted RBP30.68■■■□□ 2.5
C9orf3-208ENST00000451893 SPATA31A5Q5VU36 1347 aa30.68■■■□□ 2.5
C9orf3-208ENST00000451893 SPATA31A7Q8IWB4 1347 aa30.68■■■□□ 2.5
C9orf3-208ENST00000451893 USP6P35125 1406 aa30.66■■■□□ 2.5
C9orf3-208ENST00000451893 NLRP6P59044 892 aa30.65■■■□□ 2.5
C9orf3-208ENST00000451893 ZRANB1Q9UGI0 708 aa30.65■■■□□ 2.5
C9orf3-208ENST00000451893 USP35Q9P2H5 1018 aa30.64■■■□□ 2.5
C9orf3-208ENST00000451893 ZEB1P37275 1124 aaPredicted RBP30.63■■■□□ 2.49
C9orf3-208ENST00000451893 GCP02774 474 aa30.62■■■□□ 2.49
C9orf3-208ENST00000451893 USP19O94966 1318 aa30.62■■■□□ 2.49
C9orf3-208ENST00000451893 ZNF692Q9BU19 519 aaPredicted RBP30.61■■■□□ 2.49
C9orf3-208ENST00000451893 EP400Q96L91 3159 aa30.6■■■□□ 2.49
C9orf3-208ENST00000451893 SPATA31A1Q5TZJ5 1347 aa30.59■■■□□ 2.49
C9orf3-208ENST00000451893 CPDO75976 1380 aa30.58■■■□□ 2.49
C9orf3-208ENST00000451893 CCER1Q8TC90 406 aaPredicted RBP30.58■■■□□ 2.49
C9orf3-208ENST00000451893 SSH2Q76I76 1423 aa30.57■■■□□ 2.48
C9orf3-208ENST00000451893 AKAP12Q02952 1782 aa30.57■■■□□ 2.48
C9orf3-208ENST00000451893 KTN1Q86UP2 1357 aaKnown RBP30.54■■■□□ 2.48
C9orf3-208ENST00000451893 BAG6P46379 1132 aa30.54■■■□□ 2.48
C9orf3-208ENST00000451893 DEFB132Q7Z7B7 95 aa30.54■■■□□ 2.48
C9orf3-208ENST00000451893 TMC1Q8TDI8 760 aa30.54■■■□□ 2.48
C9orf3-208ENST00000451893 THSD7AQ9UPZ6 1657 aa30.54■■■□□ 2.48
C9orf3-208ENST00000451893 PIK3C2AO00443 1686 aa30.53■■■□□ 2.48
C9orf3-208ENST00000451893 SBNO2Q9Y2G9 1366 aa30.53■■■□□ 2.48
C9orf3-208ENST00000451893 CAMTA1Q9Y6Y1 1673 aa30.52■■■□□ 2.48
C9orf3-208ENST00000451893 SOX12O15370 315 aa30.52■■■□□ 2.48
C9orf3-208ENST00000451893 LARP1Q6PKG0 1096 aaKnown RBP30.52■■■□□ 2.48
C9orf3-208ENST00000451893 TTC21BQ7Z4L5 1316 aa30.51■■■□□ 2.48
C9orf3-208ENST00000451893 TTC21AQ8NDW8 1320 aa30.51■■■□□ 2.48
C9orf3-208ENST00000451893 FAM182BQ5T319 152 aa30.51■■■□□ 2.47
C9orf3-208ENST00000451893 LMO7Q8WWI1 1683 aa30.51■■■□□ 2.47
C9orf3-208ENST00000451893 PDE3BQ13370 1112 aa30.5■■■□□ 2.47
C9orf3-208ENST00000451893 TCP11L2Q8N4U5 519 aa30.5■■■□□ 2.47
C9orf3-208ENST00000451893 RGPD1P0DJD0 1748 aa30.5■■■□□ 2.47
C9orf3-208ENST00000451893 SLIT3O75094 1523 aa30.49■■■□□ 2.47
C9orf3-208ENST00000451893 KCNH5Q8NCM2 988 aa30.49■■■□□ 2.47
C9orf3-208ENST00000451893 HDGFL2Q7Z4V5 671 aaPredicted RBP30.48■■■□□ 2.47
C9orf3-208ENST00000451893 CLSPNQ9HAW4 1339 aa30.47■■■□□ 2.47
C9orf3-208ENST00000451893 COL5A2P05997 1499 aaPredicted RBP30.46■■■□□ 2.47
C9orf3-208ENST00000451893 BARGINQ6ZT62 677 aa30.46■■■□□ 2.47
C9orf3-208ENST00000451893 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.46■■■□□ 2.47
C9orf3-208ENST00000451893 MON2Q7Z3U7 1717 aa30.45■■■□□ 2.47
C9orf3-208ENST00000451893 THRAP3Q9Y2W1 955 aaKnown RBP30.45■■■□□ 2.47
C9orf3-208ENST00000451893 AATKQ6ZMQ8 1374 aa30.43■■■□□ 2.46
C9orf3-208ENST00000451893 CPSF1Q10570 1443 aaKnown RBP30.43■■■□□ 2.46
C9orf3-208ENST00000451893 FAM196AQ6ZSG2 479 aa30.43■■■□□ 2.46
C9orf3-208ENST00000451893 TOM1L2Q6ZVM7 507 aa30.43■■■□□ 2.46
C9orf3-208ENST00000451893 CRB1P82279 1406 aa30.42■■■□□ 2.46
C9orf3-208ENST00000451893 CSB-PGBD3P0DP91 1061 aa30.41■■■□□ 2.46
C9orf3-208ENST00000451893 TERF2IPQ9NYB0 399 aa30.41■■■□□ 2.46
C9orf3-208ENST00000451893 SLC24A1O60721 1099 aa30.4■■■□□ 2.46
C9orf3-208ENST00000451893 ST20-MTHFSA0A0A6YYL1 179 aa30.37■■■□□ 2.45
C9orf3-208ENST00000451893 TRIM37O94972 964 aa30.37■■■□□ 2.45
C9orf3-208ENST00000451893 EN1Q05925 392 aaPredicted RBP30.37■■■□□ 2.45
C9orf3-208ENST00000451893 SLC12A5Q9H2X9 1139 aa30.36■■■□□ 2.45
C9orf3-208ENST00000451893 RGPD5Q99666 1765 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms