RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 NME9Q86XW9 330 aa15.09■□□□□ 0.01
NDUFA3-209ENST00000451517 PMFBP1Q8TBY8 1022 aa15.09■□□□□ 0.01
NDUFA3-209ENST00000451517 TNNT2P45379 298 aaPredicted RBP15.08■□□□□ 0
NDUFA3-209ENST00000451517 NGDNQ8NEJ9 315 aaKnown RBP15.08■□□□□ 0
NDUFA3-209ENST00000451517 PHF8Q9UPP1 1060 aa15.08■□□□□ 0
NDUFA3-209ENST00000451517 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
NDUFA3-209ENST00000451517 TTC21AQ8NDW8 1320 aa15.07■□□□□ 0
NDUFA3-209ENST00000451517 BLMP54132 1417 aaPredicted RBP15.07■□□□□ 0
NDUFA3-209ENST00000451517 MTHFSP49914 203 aa15.06■□□□□ 0
NDUFA3-209ENST00000451517 OVOS2A0A0J9YW53 1432 aa15.06■□□□□ 0
NDUFA3-209ENST00000451517 OVOS2Q6IE36 1432 aa15.06■□□□□ 0
NDUFA3-209ENST00000451517 LRRC7Q96NW7 1537 aa15.06■□□□□ 0
NDUFA3-209ENST00000451517 COG3Q96JB2 828 aa15.05■□□□□ -0
NDUFA3-209ENST00000451517 ZRANB1Q9UGI0 708 aa15.05■□□□□ -0
NDUFA3-209ENST00000451517 ZNF335Q9H4Z2 1342 aaPredicted RBP15.05■□□□□ -0
NDUFA3-209ENST00000451517 AATKQ6ZMQ8 1374 aa15.05■□□□□ -0
NDUFA3-209ENST00000451517 C1orf167Q5SNV9 1468 aa15.05■□□□□ -0
NDUFA3-209ENST00000451517 MST1RQ04912 1400 aa15.04■□□□□ -0
NDUFA3-209ENST00000451517 USP31Q70CQ4 1352 aa15.04■□□□□ -0
NDUFA3-209ENST00000451517 ZBED9Q6R2W3 1325 aa15.04■□□□□ -0
NDUFA3-209ENST00000451517 WDR43Q15061 677 aaKnown RBP eCLIP15.04■□□□□ -0
NDUFA3-209ENST00000451517 CFAP53Q96M91 514 aa15.04■□□□□ -0
NDUFA3-209ENST00000451517 COL3A1P02461 1466 aaPredicted RBP15.03■□□□□ -0
NDUFA3-209ENST00000451517 SMG6Q86US8 1419 aaKnown RBP15.03■□□□□ -0
NDUFA3-209ENST00000451517 ATF3P18847 181 aa15.03■□□□□ -0
NDUFA3-209ENST00000451517 ESCO1Q5FWF5 840 aa15.03■□□□□ -0
NDUFA3-209ENST00000451517 ADAMTS8Q9UP79 889 aa15.03■□□□□ -0
NDUFA3-209ENST00000451517 XIRP1Q702N8 1843 aaKnown RBP15.03■□□□□ -0
NDUFA3-209ENST00000451517 SHPRHQ149N8 1683 aa15.03■□□□□ -0
NDUFA3-209ENST00000451517 MSH6P52701 1360 aa15.02■□□□□ -0
NDUFA3-209ENST00000451517 PNPLA6Q8IY17 1366 aa15.02■□□□□ -0
NDUFA3-209ENST00000451517 KIF1AQ12756 1690 aa15.02□□□□□ -0.01
NDUFA3-209ENST00000451517 PIK3C2AO00443 1686 aa15.01□□□□□ -0.01
NDUFA3-209ENST00000451517 USP54Q70EL1 1684 aa15.01□□□□□ -0.01
NDUFA3-209ENST00000451517 CADPS2Q86UW7 1296 aa15.01□□□□□ -0.01
NDUFA3-209ENST00000451517 POLKQ9UBT6 870 aa15.01□□□□□ -0.01
NDUFA3-209ENST00000451517 ORAI2Q96SN7 254 aa15□□□□□ -0.01
NDUFA3-209ENST00000451517 CDK12Q9NYV4 1490 aaPredicted RBP14.98□□□□□ -0.01
NDUFA3-209ENST00000451517 FBLN1P23142 703 aa14.97□□□□□ -0.01
NDUFA3-209ENST00000451517 PSME1Q06323 249 aa14.97□□□□□ -0.01
NDUFA3-209ENST00000451517 MARF1Q9Y4F3 1742 aaKnown RBP14.96□□□□□ -0.01
NDUFA3-209ENST00000451517 EMILIN1Q9Y6C2 1016 aa14.96□□□□□ -0.01
NDUFA3-209ENST00000451517 FOXO3O43524 673 aa14.95□□□□□ -0.02
NDUFA3-209ENST00000451517 TRPM3Q9HCF6 1732 aaPredicted RBP14.95□□□□□ -0.02
NDUFA3-209ENST00000451517 DIAPH1O60610 1272 aaKnown RBP14.94□□□□□ -0.02
NDUFA3-209ENST00000451517 NLRP6P59044 892 aa14.94□□□□□ -0.02
NDUFA3-209ENST00000451517 ABTB2Q8N961 1025 aa14.94□□□□□ -0.02
NDUFA3-209ENST00000451517 NUDCQ9Y266 331 aa14.94□□□□□ -0.02
NDUFA3-209ENST00000451517 MAP2P11137 1827 aaKnown RBP14.94□□□□□ -0.02
NDUFA3-209ENST00000451517 PAK3O75914 559 aaPredicted RBP14.93□□□□□ -0.02
NDUFA3-209ENST00000451517 RRS1Q15050 365 aaKnown RBP14.93□□□□□ -0.02
NDUFA3-209ENST00000451517 KRT28Q7Z3Y7 464 aa14.93□□□□□ -0.02
NDUFA3-209ENST00000451517 LTBP4Q8N2S1 1624 aa14.92□□□□□ -0.02
NDUFA3-209ENST00000451517 PPM1GO15355 546 aaPredicted RBP14.91□□□□□ -0.02
NDUFA3-209ENST00000451517 U2AF1L5P0DN76 240 aaPredicted RBP14.91□□□□□ -0.02
NDUFA3-209ENST00000451517 U2AF1Q01081 240 aaKnown RBP eCLIP14.91□□□□□ -0.02
NDUFA3-209ENST00000451517 CCDC146Q8IYE0 955 aa14.91□□□□□ -0.02
NDUFA3-209ENST00000451517 PEAK1Q9H792 1746 aa14.91□□□□□ -0.02
NDUFA3-209ENST00000451517 NPHP3Q7Z494 1330 aa14.91□□□□□ -0.02
NDUFA3-209ENST00000451517 SBNO1A3KN83 1393 aa14.9□□□□□ -0.02
NDUFA3-209ENST00000451517 KIF24Q5T7B8 1368 aa14.9□□□□□ -0.02
NDUFA3-209ENST00000451517 IL13P35225 146 aa14.9□□□□□ -0.02
NDUFA3-209ENST00000451517 NUTM2GQ5VZR2 741 aa14.9□□□□□ -0.02
NDUFA3-209ENST00000451517 BRINP3Q76B58 766 aa14.9□□□□□ -0.02
NDUFA3-209ENST00000451517 RUNDC1Q96C34 613 aa14.9□□□□□ -0.02
NDUFA3-209ENST00000451517 MAP3K19Q56UN5 1328 aa14.9□□□□□ -0.02
NDUFA3-209ENST00000451517 IQSEC2Q5JU85 1478 aa14.89□□□□□ -0.03
NDUFA3-209ENST00000451517 PXDNQ92626 1479 aa14.89□□□□□ -0.03
NDUFA3-209ENST00000451517 SLIT3O75094 1523 aa14.89□□□□□ -0.03
NDUFA3-209ENST00000451517 NFAT5O94916 1531 aa14.89□□□□□ -0.03
NDUFA3-209ENST00000451517 SENP3-EIF4A1A0A087X0R7 540 aa14.89□□□□□ -0.03
NDUFA3-209ENST00000451517 XPCQ01831 940 aaPredicted RBP14.89□□□□□ -0.03
NDUFA3-209ENST00000451517 PDE3BQ13370 1112 aa14.89□□□□□ -0.03
NDUFA3-209ENST00000451517 NGEFQ8N5V2 710 aa14.89□□□□□ -0.03
NDUFA3-209ENST00000451517 SLAIN2Q9P270 581 aa14.89□□□□□ -0.03
NDUFA3-209ENST00000451517 USP19O94966 1318 aa14.89□□□□□ -0.03
NDUFA3-209ENST00000451517 ALS2Q96Q42 1657 aa14.88□□□□□ -0.03
NDUFA3-209ENST00000451517 APAF1O14727 1248 aa14.88□□□□□ -0.03
NDUFA3-209ENST00000451517 U2SURPO15042 1029 aaKnown RBP14.88□□□□□ -0.03
NDUFA3-209ENST00000451517 FLT4P35916 1363 aa14.87□□□□□ -0.03
NDUFA3-209ENST00000451517 NCBP3Q53F19 620 aaKnown RBP14.87□□□□□ -0.03
NDUFA3-209ENST00000451517 ZNF521Q96K83 1311 aa14.87□□□□□ -0.03
NDUFA3-209ENST00000451517 RTL1A6NKG5 1358 aa14.86□□□□□ -0.03
NDUFA3-209ENST00000451517 SOX12O15370 315 aa14.86□□□□□ -0.03
NDUFA3-209ENST00000451517 KCNH5Q8NCM2 988 aa14.86□□□□□ -0.03
NDUFA3-209ENST00000451517 PLEKHF1Q96S99 279 aa14.86□□□□□ -0.03
NDUFA3-209ENST00000451517 SALL2Q9Y467 1007 aaPredicted RBP14.86□□□□□ -0.03
NDUFA3-209ENST00000451517 TNS3Q68CZ2 1445 aa14.85□□□□□ -0.03
NDUFA3-209ENST00000451517 FCHSD2O94868 740 aa14.85□□□□□ -0.03
NDUFA3-209ENST00000451517 EIF4A2Q14240 407 aaKnown RBP14.85□□□□□ -0.03
NDUFA3-209ENST00000451517 DDX17Q92841 729 aaKnown RBP14.85□□□□□ -0.03
NDUFA3-209ENST00000451517 RSPH6AQ9H0K4 717 aa14.85□□□□□ -0.03
NDUFA3-209ENST00000451517 PNNQ9H307 717 aaKnown RBP14.85□□□□□ -0.03
NDUFA3-209ENST00000451517 AMPHP49418 695 aa14.84□□□□□ -0.03
NDUFA3-209ENST00000451517 HSP90AB2PQ58FF8 381 aa14.84□□□□□ -0.03
NDUFA3-209ENST00000451517 TCP11L2Q8N4U5 519 aa14.84□□□□□ -0.03
NDUFA3-209ENST00000451517 PHRF1Q9P1Y6 1649 aaKnown RBP14.84□□□□□ -0.03
NDUFA3-209ENST00000451517 HOXC9P31274 260 aa14.83□□□□□ -0.04
NDUFA3-209ENST00000451517 PHF23Q9BUL5 403 aaPredicted RBP14.83□□□□□ -0.04
NDUFA3-209ENST00000451517 SOS2Q07890 1332 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms