RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 NWD1Q149M9 1564 aa11.06□□□□□ -0.64
NECAP1-202ENST00000450991 NKTRP30414 1462 aaKnown RBP11.05□□□□□ -0.64
NECAP1-202ENST00000450991 NME9Q86XW9 330 aa11.05□□□□□ -0.64
NECAP1-202ENST00000450991 ZRANB1Q9UGI0 708 aa11.05□□□□□ -0.64
NECAP1-202ENST00000450991 EDC4Q6P2E9 1401 aaKnown RBP11.05□□□□□ -0.64
NECAP1-202ENST00000450991 PLEKHG3A1L390 1219 aa11.04□□□□□ -0.64
NECAP1-202ENST00000450991 NGDNQ8NEJ9 315 aaKnown RBP11.04□□□□□ -0.64
NECAP1-202ENST00000450991 ADGRL3Q9HAR2 1447 aa11.04□□□□□ -0.64
NECAP1-202ENST00000450991 FBLN1P23142 703 aa11.04□□□□□ -0.64
NECAP1-202ENST00000450991 ADAMTS8Q9UP79 889 aa11.04□□□□□ -0.64
NECAP1-202ENST00000450991 TMEM94Q12767 1356 aa11.03□□□□□ -0.64
NECAP1-202ENST00000450991 SMG6Q86US8 1419 aaKnown RBP11.03□□□□□ -0.64
NECAP1-202ENST00000450991 ZNF335Q9H4Z2 1342 aaPredicted RBP11.03□□□□□ -0.64
NECAP1-202ENST00000450991 COL3A1P02461 1466 aaPredicted RBP11.02□□□□□ -0.65
NECAP1-202ENST00000450991 WDR43Q15061 677 aaKnown RBP eCLIP11.02□□□□□ -0.65
NECAP1-202ENST00000450991 ZNF692Q9BU19 519 aaPredicted RBP11.02□□□□□ -0.65
NECAP1-202ENST00000450991 MTHFSP49914 203 aa11.01□□□□□ -0.65
NECAP1-202ENST00000450991 ESCO1Q5FWF5 840 aa11.01□□□□□ -0.65
NECAP1-202ENST00000450991 STRCP1A6NGW2 1772 aa11.01□□□□□ -0.65
NECAP1-202ENST00000450991 TTC21BQ7Z4L5 1316 aa11.01□□□□□ -0.65
NECAP1-202ENST00000450991 STRCQ7RTU9 1775 aa11.01□□□□□ -0.65
NECAP1-202ENST00000450991 ANKARQ7Z5J8 1434 aa11.01□□□□□ -0.65
NECAP1-202ENST00000450991 USP54Q70EL1 1684 aa11.01□□□□□ -0.65
NECAP1-202ENST00000450991 ORAI2Q96SN7 254 aa11□□□□□ -0.65
NECAP1-202ENST00000450991 USP6P35125 1406 aa11□□□□□ -0.65
NECAP1-202ENST00000450991 MARF1Q9Y4F3 1742 aaKnown RBP11□□□□□ -0.65
NECAP1-202ENST00000450991 C19orf44Q9H6X5 657 aa11□□□□□ -0.65
NECAP1-202ENST00000450991 PHF8Q9UPP1 1060 aa11□□□□□ -0.65
NECAP1-202ENST00000450991 PPM1GO15355 546 aaPredicted RBP10.98□□□□□ -0.65
NECAP1-202ENST00000450991 SOX12O15370 315 aa10.98□□□□□ -0.65
NECAP1-202ENST00000450991 XPCQ01831 940 aaPredicted RBP10.98□□□□□ -0.65
NECAP1-202ENST00000450991 COG3Q96JB2 828 aa10.98□□□□□ -0.65
NECAP1-202ENST00000450991 NUDCQ9Y266 331 aa10.98□□□□□ -0.65
NECAP1-202ENST00000450991 SALL2Q9Y467 1007 aaPredicted RBP10.98□□□□□ -0.65
NECAP1-202ENST00000450991 PIK3C2AO00443 1686 aa10.98□□□□□ -0.65
NECAP1-202ENST00000450991 SSH2Q76I76 1423 aa10.98□□□□□ -0.65
NECAP1-202ENST00000450991 PAK3O75914 559 aaPredicted RBP10.98□□□□□ -0.65
NECAP1-202ENST00000450991 ATF3P18847 181 aa10.98□□□□□ -0.65
NECAP1-202ENST00000450991 NUTM2GQ5VZR2 741 aa10.98□□□□□ -0.65
NECAP1-202ENST00000450991 FOXO3O43524 673 aa10.97□□□□□ -0.65
NECAP1-202ENST00000450991 PDE3BQ13370 1112 aa10.97□□□□□ -0.65
NECAP1-202ENST00000450991 CFAP53Q96M91 514 aa10.97□□□□□ -0.65
NECAP1-202ENST00000450991 SUPT16HQ9Y5B9 1047 aaKnown RBP10.97□□□□□ -0.65
NECAP1-202ENST00000450991 IQSEC2Q5JU85 1478 aa10.97□□□□□ -0.65
NECAP1-202ENST00000450991 PNPLA6Q8IY17 1366 aa10.96□□□□□ -0.65
NECAP1-202ENST00000450991 RRS1Q15050 365 aaKnown RBP10.96□□□□□ -0.65
NECAP1-202ENST00000450991 EMILIN1Q9Y6C2 1016 aa10.96□□□□□ -0.65
NECAP1-202ENST00000450991 CCDC146Q8IYE0 955 aa10.96□□□□□ -0.66
NECAP1-202ENST00000450991 OVOS2A0A0J9YW53 1432 aa10.96□□□□□ -0.66
NECAP1-202ENST00000450991 OVOS2Q6IE36 1432 aa10.96□□□□□ -0.66
NECAP1-202ENST00000450991 XIRP1Q702N8 1843 aaKnown RBP10.95□□□□□ -0.66
NECAP1-202ENST00000450991 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
NECAP1-202ENST00000450991 PSME1Q06323 249 aa10.95□□□□□ -0.66
NECAP1-202ENST00000450991 POLKQ9UBT6 870 aa10.95□□□□□ -0.66
NECAP1-202ENST00000450991 AATKQ6ZMQ8 1374 aa10.95□□□□□ -0.66
NECAP1-202ENST00000450991 C1orf167Q5SNV9 1468 aa10.95□□□□□ -0.66
NECAP1-202ENST00000450991 CDK12Q9NYV4 1490 aaPredicted RBP10.95□□□□□ -0.66
NECAP1-202ENST00000450991 ZNF521Q96K83 1311 aa10.95□□□□□ -0.66
NECAP1-202ENST00000450991 DDX17Q92841 729 aaKnown RBP10.95□□□□□ -0.66
NECAP1-202ENST00000450991 PEAK1Q9H792 1746 aa10.94□□□□□ -0.66
NECAP1-202ENST00000450991 LRRC7Q96NW7 1537 aa10.94□□□□□ -0.66
NECAP1-202ENST00000450991 MSH6P52701 1360 aa10.94□□□□□ -0.66
NECAP1-202ENST00000450991 TTC21AQ8NDW8 1320 aa10.94□□□□□ -0.66
NECAP1-202ENST00000450991 NLRP6P59044 892 aa10.94□□□□□ -0.66
NECAP1-202ENST00000450991 DMRT2Q9Y5R5 561 aa10.94□□□□□ -0.66
NECAP1-202ENST00000450991 MST1RQ04912 1400 aa10.93□□□□□ -0.66
NECAP1-202ENST00000450991 FKBP8Q14318 412 aa10.93□□□□□ -0.66
NECAP1-202ENST00000450991 CADPS2Q86UW7 1296 aa10.93□□□□□ -0.66
NECAP1-202ENST00000450991 ABTB2Q8N961 1025 aa10.93□□□□□ -0.66
NECAP1-202ENST00000450991 NEFLP07196 543 aa10.93□□□□□ -0.66
NECAP1-202ENST00000450991 KIF1AQ12756 1690 aa10.92□□□□□ -0.66
NECAP1-202ENST00000450991 APAF1O14727 1248 aa10.92□□□□□ -0.66
NECAP1-202ENST00000450991 U2SURPO15042 1029 aaKnown RBP10.92□□□□□ -0.66
NECAP1-202ENST00000450991 LMOD2Q6P5Q4 547 aa10.92□□□□□ -0.66
NECAP1-202ENST00000450991 NCOA3Q9Y6Q9 1424 aa10.92□□□□□ -0.66
NECAP1-202ENST00000450991 U2AF1L5P0DN76 240 aaPredicted RBP10.92□□□□□ -0.66
NECAP1-202ENST00000450991 U2AF1Q01081 240 aaKnown RBP eCLIP10.92□□□□□ -0.66
NECAP1-202ENST00000450991 CDCA7LQ96GN5 454 aa10.92□□□□□ -0.66
NECAP1-202ENST00000450991 RNF123Q5XPI4 1314 aa10.91□□□□□ -0.66
NECAP1-202ENST00000450991 USP31Q70CQ4 1352 aa10.91□□□□□ -0.66
NECAP1-202ENST00000450991 DLG5Q8TDM6 1919 aa10.91□□□□□ -0.66
NECAP1-202ENST00000450991 NGEFQ8N5V2 710 aa10.91□□□□□ -0.66
NECAP1-202ENST00000450991 RUNDC1Q96C34 613 aa10.91□□□□□ -0.66
NECAP1-202ENST00000450991 RGPD1P0DJD0 1748 aa10.91□□□□□ -0.66
NECAP1-202ENST00000450991 LTN1O94822 1766 aa10.91□□□□□ -0.66
NECAP1-202ENST00000450991 DCCP43146 1447 aa10.9□□□□□ -0.66
NECAP1-202ENST00000450991 KRT28Q7Z3Y7 464 aa10.9□□□□□ -0.66
NECAP1-202ENST00000450991 TRPM3Q9HCF6 1732 aaPredicted RBP10.9□□□□□ -0.66
NECAP1-202ENST00000450991 DIAPH1O60610 1272 aaKnown RBP10.9□□□□□ -0.66
NECAP1-202ENST00000450991 BCL11AQ9H165 835 aa10.89□□□□□ -0.67
NECAP1-202ENST00000450991 HOMEZQ8IX15 550 aa10.89□□□□□ -0.67
NECAP1-202ENST00000450991 MAP3K19Q56UN5 1328 aa10.88□□□□□ -0.67
NECAP1-202ENST00000450991 BRINP3Q76B58 766 aa10.88□□□□□ -0.67
NECAP1-202ENST00000450991 PLEKHF1Q96S99 279 aa10.88□□□□□ -0.67
NECAP1-202ENST00000450991 SLAIN2Q9P270 581 aa10.88□□□□□ -0.67
NECAP1-202ENST00000450991 ZBTB7CA1YPR0 619 aa10.87□□□□□ -0.67
NECAP1-202ENST00000450991 GOLGA2Q08379 1002 aa10.87□□□□□ -0.67
NECAP1-202ENST00000450991 HSP90AB2PQ58FF8 381 aa10.87□□□□□ -0.67
NECAP1-202ENST00000450991 TRMT2AQ8IZ69 625 aaKnown RBP10.87□□□□□ -0.67
NECAP1-202ENST00000450991 TCP11L2Q8N4U5 519 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms