RNA–Protein interactions for RNA: ENST00000450454.6

TCEA3-203, Transcript of transcription elongation factor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCEA3, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-203ENST00000450454 ALS2Q96Q42 1657 aa16.59■□□□□ 0.25
TCEA3-203ENST00000450454 RALGAPBQ86X10 1494 aa16.58■□□□□ 0.24
TCEA3-203ENST00000450454 FAM83GA6ND36 823 aa16.57■□□□□ 0.24
TCEA3-203ENST00000450454 ZNF316A6NFI3 1004 aaPredicted RBP16.57■□□□□ 0.24
TCEA3-203ENST00000450454 SRPK2P78362 688 aaKnown RBP16.57■□□□□ 0.24
TCEA3-203ENST00000450454 ACEP12821 1306 aa16.57■□□□□ 0.24
TCEA3-203ENST00000450454 POLR3AO14802 1390 aaPredicted RBP16.57■□□□□ 0.24
TCEA3-203ENST00000450454 PLCH1Q4KWH8 1693 aa16.56■□□□□ 0.24
TCEA3-203ENST00000450454 TOPAZ1Q8N9V7 1692 aa16.56■□□□□ 0.24
TCEA3-203ENST00000450454 PLEKHG3A1L390 1219 aa16.56■□□□□ 0.24
TCEA3-203ENST00000450454 VPS72Q15906 364 aa16.56■□□□□ 0.24
TCEA3-203ENST00000450454 NWD2Q9ULI1 1742 aa16.56■□□□□ 0.24
TCEA3-203ENST00000450454 NBPF8Q3BBV2 869 aa16.55■□□□□ 0.24
TCEA3-203ENST00000450454 TRPM1Q7Z4N2 1603 aa16.55■□□□□ 0.24
TCEA3-203ENST00000450454 ROCK2O75116 1388 aaKnown RBP16.55■□□□□ 0.24
TCEA3-203ENST00000450454 GLI3P10071 1580 aa16.55■□□□□ 0.24
TCEA3-203ENST00000450454 CCDC9Q9Y3X0 531 aaKnown RBP16.55■□□□□ 0.24
TCEA3-203ENST00000450454 QRICH2Q9H0J4 1663 aa16.54■□□□□ 0.24
TCEA3-203ENST00000450454 CABP2Q9NPB3 220 aa16.54■□□□□ 0.24
TCEA3-203ENST00000450454 BTG4Q9NY30 223 aa16.53■□□□□ 0.24
TCEA3-203ENST00000450454 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
TCEA3-203ENST00000450454 COL14A1Q05707 1796 aaKnown RBP16.52■□□□□ 0.24
TCEA3-203ENST00000450454 PRDM11Q9NQV5 511 aa16.51■□□□□ 0.23
TCEA3-203ENST00000450454 CRYBG1Q9Y4K1 1723 aa16.51■□□□□ 0.23
TCEA3-203ENST00000450454 EVC2Q86UK5 1308 aa16.51■□□□□ 0.23
TCEA3-203ENST00000450454 NUTM2GQ5VZR2 741 aa16.5■□□□□ 0.23
TCEA3-203ENST00000450454 SEPT12Q8IYM1 358 aa16.5■□□□□ 0.23
TCEA3-203ENST00000450454 ABTB2Q8N961 1025 aa16.5■□□□□ 0.23
TCEA3-203ENST00000450454 ONECUT3O60422 494 aaPredicted RBP16.49■□□□□ 0.23
TCEA3-203ENST00000450454 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
TCEA3-203ENST00000450454 NRAPQ86VF7 1730 aa16.48■□□□□ 0.23
TCEA3-203ENST00000450454 BRD4O60885 1362 aaPredicted RBP16.48■□□□□ 0.23
TCEA3-203ENST00000450454 CABP1Q9NZU7 370 aa16.48■□□□□ 0.23
TCEA3-203ENST00000450454 EP400Q96L91 3159 aa16.48■□□□□ 0.23
TCEA3-203ENST00000450454 KIAA0232Q92628 1395 aa16.48■□□□□ 0.23
TCEA3-203ENST00000450454 PHRF1Q9P1Y6 1649 aaKnown RBP16.47■□□□□ 0.23
TCEA3-203ENST00000450454 A0A0G2JS52 829 aa16.47■□□□□ 0.23
TCEA3-203ENST00000450454 ZC3H6P61129 1189 aaKnown RBP16.47■□□□□ 0.23
TCEA3-203ENST00000450454 MYT1Q01538 1121 aa16.47■□□□□ 0.23
TCEA3-203ENST00000450454 NLRP13Q86W25 1043 aa16.46■□□□□ 0.23
TCEA3-203ENST00000450454 CHRNA2Q15822 529 aa16.45■□□□□ 0.22
TCEA3-203ENST00000450454 FAM98CQ17RN3 349 aaKnown RBP16.45■□□□□ 0.22
TCEA3-203ENST00000450454 CARD11Q9BXL7 1154 aa16.45■□□□□ 0.22
TCEA3-203ENST00000450454 USP19O94966 1318 aa16.44■□□□□ 0.22
TCEA3-203ENST00000450454 SPATA31A5Q5VU36 1347 aa16.44■□□□□ 0.22
TCEA3-203ENST00000450454 SPATA31A7Q8IWB4 1347 aa16.44■□□□□ 0.22
TCEA3-203ENST00000450454 USP6P35125 1406 aa16.44■□□□□ 0.22
TCEA3-203ENST00000450454 KRT27Q7Z3Y8 459 aa16.44■□□□□ 0.22
TCEA3-203ENST00000450454 BRWD3Q6RI45 1802 aa16.44■□□□□ 0.22
TCEA3-203ENST00000450454 NRKQ7Z2Y5 1582 aa16.42■□□□□ 0.22
TCEA3-203ENST00000450454 BLMP54132 1417 aaPredicted RBP16.42■□□□□ 0.22
TCEA3-203ENST00000450454 GCP02774 474 aa16.42■□□□□ 0.22
TCEA3-203ENST00000450454 STRN4Q9NRL3 753 aa16.42■□□□□ 0.22
TCEA3-203ENST00000450454 CPDO75976 1380 aa16.42■□□□□ 0.22
TCEA3-203ENST00000450454 SBNO2Q9Y2G9 1366 aa16.42■□□□□ 0.22
TCEA3-203ENST00000450454 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
TCEA3-203ENST00000450454 EVA1CP58658 441 aa16.4■□□□□ 0.22
TCEA3-203ENST00000450454 NLRP6P59044 892 aa16.4■□□□□ 0.22
TCEA3-203ENST00000450454 SF3B2Q13435 895 aaKnown RBP16.4■□□□□ 0.22
TCEA3-203ENST00000450454 SPATA31A1Q5TZJ5 1347 aa16.4■□□□□ 0.22
TCEA3-203ENST00000450454 SSH2Q76I76 1423 aa16.39■□□□□ 0.21
TCEA3-203ENST00000450454 DIEXFQ68CQ4 756 aaKnown RBP16.38■□□□□ 0.21
TCEA3-203ENST00000450454 ZRANB1Q9UGI0 708 aa16.37■□□□□ 0.21
TCEA3-203ENST00000450454 CAMTA1Q9Y6Y1 1673 aa16.37■□□□□ 0.21
TCEA3-203ENST00000450454 TTC21BQ7Z4L5 1316 aa16.37■□□□□ 0.21
TCEA3-203ENST00000450454 THSD7AQ9UPZ6 1657 aa16.36■□□□□ 0.21
TCEA3-203ENST00000450454 SLIT3O75094 1523 aa16.36■□□□□ 0.21
TCEA3-203ENST00000450454 TTC21AQ8NDW8 1320 aa16.36■□□□□ 0.21
TCEA3-203ENST00000450454 KTN1Q86UP2 1357 aaKnown RBP16.36■□□□□ 0.21
TCEA3-203ENST00000450454 CPSF1Q10570 1443 aaKnown RBP16.35■□□□□ 0.21
TCEA3-203ENST00000450454 LMO7Q8WWI1 1683 aa16.35■□□□□ 0.21
TCEA3-203ENST00000450454 ZBTB7CA1YPR0 619 aa16.35■□□□□ 0.21
TCEA3-203ENST00000450454 USP35Q9P2H5 1018 aa16.35■□□□□ 0.21
TCEA3-203ENST00000450454 PIK3C2AO00443 1686 aa16.35■□□□□ 0.21
TCEA3-203ENST00000450454 LARP1Q6PKG0 1096 aaKnown RBP16.34■□□□□ 0.21
TCEA3-203ENST00000450454 AKAP12Q02952 1782 aa16.34■□□□□ 0.21
TCEA3-203ENST00000450454 BARGINQ6ZT62 677 aa16.34■□□□□ 0.21
TCEA3-203ENST00000450454 DEFB132Q7Z7B7 95 aa16.33■□□□□ 0.2
TCEA3-203ENST00000450454 TCP11L2Q8N4U5 519 aa16.33■□□□□ 0.2
TCEA3-203ENST00000450454 KCNH5Q8NCM2 988 aa16.33■□□□□ 0.2
TCEA3-203ENST00000450454 AATKQ6ZMQ8 1374 aa16.33■□□□□ 0.2
TCEA3-203ENST00000450454 FAM182BQ5T319 152 aa16.32■□□□□ 0.2
TCEA3-203ENST00000450454 TMC1Q8TDI8 760 aa16.32■□□□□ 0.2
TCEA3-203ENST00000450454 THRAP3Q9Y2W1 955 aaKnown RBP16.32■□□□□ 0.2
TCEA3-203ENST00000450454 COL5A2P05997 1499 aaPredicted RBP16.32■□□□□ 0.2
TCEA3-203ENST00000450454 BAG6P46379 1132 aa16.31■□□□□ 0.2
TCEA3-203ENST00000450454 PUS7Q96PZ0 661 aaKnown RBP16.31■□□□□ 0.2
TCEA3-203ENST00000450454 SLC24A1O60721 1099 aa16.3■□□□□ 0.2
TCEA3-203ENST00000450454 HDGFL2Q7Z4V5 671 aaPredicted RBP16.3■□□□□ 0.2
TCEA3-203ENST00000450454 CRB1P82279 1406 aa16.3■□□□□ 0.2
TCEA3-203ENST00000450454 PDE3BQ13370 1112 aa16.3■□□□□ 0.2
TCEA3-203ENST00000450454 ST20-MTHFSA0A0A6YYL1 179 aa16.29■□□□□ 0.2
TCEA3-203ENST00000450454 SOX12O15370 315 aa16.29■□□□□ 0.2
TCEA3-203ENST00000450454 FAM196AQ6ZSG2 479 aa16.29■□□□□ 0.2
TCEA3-203ENST00000450454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.29■□□□□ 0.2
TCEA3-203ENST00000450454 TERF2IPQ9NYB0 399 aa16.29■□□□□ 0.2
TCEA3-203ENST00000450454 MON2Q7Z3U7 1717 aa16.29■□□□□ 0.2
TCEA3-203ENST00000450454 CD163L1Q9NR16 1453 aa16.28■□□□□ 0.2
TCEA3-203ENST00000450454 ARHGEF25Q86VW2 580 aa16.28■□□□□ 0.2
TCEA3-203ENST00000450454 SLC12A5Q9H2X9 1139 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms