RNA–Protein interactions for RNA: ENST00000450364.3

SMARCD2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-204ENST00000450364 PLEKHG3A1L390 1219 aa19.71■□□□□ 0.75
SMARCD2-204ENST00000450364 CABP2Q9NPB3 220 aa19.71■□□□□ 0.75
SMARCD2-204ENST00000450364 ACEP12821 1306 aa19.71■□□□□ 0.75
SMARCD2-204ENST00000450364 ROCK2O75116 1388 aaKnown RBP19.7■□□□□ 0.74
SMARCD2-204ENST00000450364 PHRF1Q9P1Y6 1649 aaKnown RBP19.7■□□□□ 0.74
SMARCD2-204ENST00000450364 FAM83GA6ND36 823 aa19.7■□□□□ 0.74
SMARCD2-204ENST00000450364 UNC5CLQ8IV45 518 aa19.7■□□□□ 0.74
SMARCD2-204ENST00000450364 CCDC61Q9Y6R9 512 aa19.7■□□□□ 0.74
SMARCD2-204ENST00000450364 RALGAPBQ86X10 1494 aa19.7■□□□□ 0.74
SMARCD2-204ENST00000450364 PPIP5K1Q6PFW1 1433 aa19.68■□□□□ 0.74
SMARCD2-204ENST00000450364 GJD4Q96KN9 370 aaPredicted RBP19.68■□□□□ 0.74
SMARCD2-204ENST00000450364 COL14A1Q05707 1796 aaKnown RBP19.66■□□□□ 0.74
SMARCD2-204ENST00000450364 PAK3O75914 559 aaPredicted RBP19.66■□□□□ 0.74
SMARCD2-204ENST00000450364 SRPK2P78362 688 aaKnown RBP19.66■□□□□ 0.74
SMARCD2-204ENST00000450364 HAP1P54257 671 aaPredicted RBP19.65■□□□□ 0.74
SMARCD2-204ENST00000450364 BRWD3Q6RI45 1802 aa19.65■□□□□ 0.74
SMARCD2-204ENST00000450364 NRKQ7Z2Y5 1582 aa19.64■□□□□ 0.73
SMARCD2-204ENST00000450364 NUTM2GQ5VZR2 741 aa19.63■□□□□ 0.73
SMARCD2-204ENST00000450364 TONSLQ96HA7 1378 aa19.62■□□□□ 0.73
SMARCD2-204ENST00000450364 VPS72Q15906 364 aa19.62■□□□□ 0.73
SMARCD2-204ENST00000450364 CABP1Q9NZU7 370 aa19.62■□□□□ 0.73
SMARCD2-204ENST00000450364 SSH2Q76I76 1423 aa19.61■□□□□ 0.73
SMARCD2-204ENST00000450364 AKAP12Q02952 1782 aa19.6■□□□□ 0.73
SMARCD2-204ENST00000450364 USP6P35125 1406 aa19.59■□□□□ 0.73
SMARCD2-204ENST00000450364 KIAA0232Q92628 1395 aa19.59■□□□□ 0.73
SMARCD2-204ENST00000450364 USP19O94966 1318 aa19.59■□□□□ 0.73
SMARCD2-204ENST00000450364 BTG4Q9NY30 223 aa19.59■□□□□ 0.73
SMARCD2-204ENST00000450364 PIK3C2AO00443 1686 aa19.59■□□□□ 0.73
SMARCD2-204ENST00000450364 EVC2Q86UK5 1308 aa19.58■□□□□ 0.73
SMARCD2-204ENST00000450364 ATAD2Q6PL18 1390 aa19.57■□□□□ 0.72
SMARCD2-204ENST00000450364 SBNO2Q9Y2G9 1366 aa19.57■□□□□ 0.72
SMARCD2-204ENST00000450364 LMO7Q8WWI1 1683 aa19.57■□□□□ 0.72
SMARCD2-204ENST00000450364 ONECUT3O60422 494 aaPredicted RBP19.57■□□□□ 0.72
SMARCD2-204ENST00000450364 CARD11Q9BXL7 1154 aa19.57■□□□□ 0.72
SMARCD2-204ENST00000450364 CHRNA2Q15822 529 aa19.56■□□□□ 0.72
SMARCD2-204ENST00000450364 ABTB2Q8N961 1025 aa19.55■□□□□ 0.72
SMARCD2-204ENST00000450364 CPSF1Q10570 1443 aaKnown RBP19.54■□□□□ 0.72
SMARCD2-204ENST00000450364 ZC3H6P61129 1189 aaKnown RBP19.54■□□□□ 0.72
SMARCD2-204ENST00000450364 SEPT12Q8IYM1 358 aa19.54■□□□□ 0.72
SMARCD2-204ENST00000450364 PRDM11Q9NQV5 511 aa19.54■□□□□ 0.72
SMARCD2-204ENST00000450364 SLIT3O75094 1523 aa19.54■□□□□ 0.72
SMARCD2-204ENST00000450364 CD163L1Q9NR16 1453 aa19.54■□□□□ 0.72
SMARCD2-204ENST00000450364 THSD7AQ9UPZ6 1657 aa19.53■□□□□ 0.72
SMARCD2-204ENST00000450364 CAMTA1Q9Y6Y1 1673 aa19.53■□□□□ 0.72
SMARCD2-204ENST00000450364 BRD4O60885 1362 aaPredicted RBP19.53■□□□□ 0.72
SMARCD2-204ENST00000450364 MON2Q7Z3U7 1717 aa19.53■□□□□ 0.72
SMARCD2-204ENST00000450364 SPATA31A5Q5VU36 1347 aa19.52■□□□□ 0.72
SMARCD2-204ENST00000450364 SPATA31A7Q8IWB4 1347 aa19.52■□□□□ 0.72
SMARCD2-204ENST00000450364 CPDO75976 1380 aa19.52■□□□□ 0.72
SMARCD2-204ENST00000450364 CCDC9Q9Y3X0 531 aaKnown RBP19.51■□□□□ 0.71
SMARCD2-204ENST00000450364 TESK2Q96S53 571 aa19.5■□□□□ 0.71
SMARCD2-204ENST00000450364 GCP02774 474 aa19.49■□□□□ 0.71
SMARCD2-204ENST00000450364 FAM98CQ17RN3 349 aaKnown RBP19.49■□□□□ 0.71
SMARCD2-204ENST00000450364 COL18A1P39060 1754 aa19.49■□□□□ 0.71
SMARCD2-204ENST00000450364 TTC21BQ7Z4L5 1316 aa19.49■□□□□ 0.71
SMARCD2-204ENST00000450364 NLRP13Q86W25 1043 aa19.48■□□□□ 0.71
SMARCD2-204ENST00000450364 SPATA31A1Q5TZJ5 1347 aa19.47■□□□□ 0.71
SMARCD2-204ENST00000450364 ST20-MTHFSA0A0A6YYL1 179 aa19.45■□□□□ 0.7
SMARCD2-204ENST00000450364 NLRP6P59044 892 aa19.45■□□□□ 0.7
SMARCD2-204ENST00000450364 STRN4Q9NRL3 753 aa19.45■□□□□ 0.7
SMARCD2-204ENST00000450364 USP54Q70EL1 1684 aa19.45■□□□□ 0.7
SMARCD2-204ENST00000450364 COL5A2P05997 1499 aaPredicted RBP19.44■□□□□ 0.7
SMARCD2-204ENST00000450364 ZNF692Q9BU19 519 aaPredicted RBP19.44■□□□□ 0.7
SMARCD2-204ENST00000450364 PCGF6Q9BYE7 350 aa19.44■□□□□ 0.7
SMARCD2-204ENST00000450364 ZRANB1Q9UGI0 708 aa19.44■□□□□ 0.7
SMARCD2-204ENST00000450364 NFAT5O94916 1531 aa19.44■□□□□ 0.7
SMARCD2-204ENST00000450364 KTN1Q86UP2 1357 aaKnown RBP19.44■□□□□ 0.7
SMARCD2-204ENST00000450364 LARP1Q6PKG0 1096 aaKnown RBP19.43■□□□□ 0.7
SMARCD2-204ENST00000450364 KRT27Q7Z3Y8 459 aa19.43■□□□□ 0.7
SMARCD2-204ENST00000450364 SLC12A5Q9H2X9 1139 aa19.43■□□□□ 0.7
SMARCD2-204ENST00000450364 BLMP54132 1417 aaPredicted RBP19.42■□□□□ 0.7
SMARCD2-204ENST00000450364 FAM182BQ5T319 152 aa19.41■□□□□ 0.7
SMARCD2-204ENST00000450364 TTC21AQ8NDW8 1320 aa19.41■□□□□ 0.7
SMARCD2-204ENST00000450364 RGPD5Q99666 1765 aa19.41■□□□□ 0.7
SMARCD2-204ENST00000450364 AXIN2Q9Y2T1 843 aa19.4■□□□□ 0.7
SMARCD2-204ENST00000450364 A0A1W2PP64 1363 aa19.4■□□□□ 0.7
SMARCD2-204ENST00000450364 AATKQ6ZMQ8 1374 aa19.4■□□□□ 0.7
SMARCD2-204ENST00000450364 USP47Q96K76 1375 aa19.39■□□□□ 0.69
SMARCD2-204ENST00000450364 A0A0G2JS52 829 aa19.38■□□□□ 0.69
SMARCD2-204ENST00000450364 MYT1Q01538 1121 aa19.38■□□□□ 0.69
SMARCD2-204ENST00000450364 USP31Q70CQ4 1352 aa19.38■□□□□ 0.69
SMARCD2-204ENST00000450364 ARHGEF25Q86VW2 580 aa19.38■□□□□ 0.69
SMARCD2-204ENST00000450364 NME9Q86XW9 330 aa19.38■□□□□ 0.69
SMARCD2-204ENST00000450364 CCDC125Q86Z20 511 aa19.38■□□□□ 0.69
SMARCD2-204ENST00000450364 PUS7Q96PZ0 661 aaKnown RBP19.38■□□□□ 0.69
SMARCD2-204ENST00000450364 SRCAPQ6ZRS2 3230 aa19.37■□□□□ 0.69
SMARCD2-204ENST00000450364 DEFB132Q7Z7B7 95 aa19.37■□□□□ 0.69
SMARCD2-204ENST00000450364 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.37■□□□□ 0.69
SMARCD2-204ENST00000450364 TMC1Q8TDI8 760 aa19.37■□□□□ 0.69
SMARCD2-204ENST00000450364 USP35Q9P2H5 1018 aa19.37■□□□□ 0.69
SMARCD2-204ENST00000450364 TNS1Q9HBL0 1735 aaKnown RBP19.37■□□□□ 0.69
SMARCD2-204ENST00000450364 CLSPNQ9HAW4 1339 aa19.36■□□□□ 0.69
SMARCD2-204ENST00000450364 ZBTB7CA1YPR0 619 aa19.36■□□□□ 0.69
SMARCD2-204ENST00000450364 EVA1CP58658 441 aa19.36■□□□□ 0.69
SMARCD2-204ENST00000450364 BARGINQ6ZT62 677 aa19.36■□□□□ 0.69
SMARCD2-204ENST00000450364 EDC4Q6P2E9 1401 aaKnown RBP19.35■□□□□ 0.69
SMARCD2-204ENST00000450364 PARP4Q9UKK3 1724 aaKnown RBP19.35■□□□□ 0.69
SMARCD2-204ENST00000450364 WNK3Q9BYP7 1800 aa19.35■□□□□ 0.69
SMARCD2-204ENST00000450364 SOX12O15370 315 aa19.34■□□□□ 0.69
SMARCD2-204ENST00000450364 OVOS2A0A0J9YW53 1432 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms