RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 ANKARQ7Z5J8 1434 aa25.4■■□□□ 1.66
FAM3A-216ENST00000449971 NGDNQ8NEJ9 315 aaKnown RBP25.38■■□□□ 1.65
FAM3A-216ENST00000449971 PRDM11Q9NQV5 511 aa25.38■■□□□ 1.65
FAM3A-216ENST00000449971 SPATA31A5Q5VU36 1347 aa25.37■■□□□ 1.65
FAM3A-216ENST00000449971 SPATA31A7Q8IWB4 1347 aa25.37■■□□□ 1.65
FAM3A-216ENST00000449971 PRR36Q9H6K5 1346 aa25.37■■□□□ 1.65
FAM3A-216ENST00000449971 TRIM26Q12899 539 aaPredicted RBP25.36■■□□□ 1.65
FAM3A-216ENST00000449971 EZH2Q15910 746 aaKnown RBP25.36■■□□□ 1.65
FAM3A-216ENST00000449971 COL14A1Q05707 1796 aaKnown RBP25.36■■□□□ 1.65
FAM3A-216ENST00000449971 STRN4Q9NRL3 753 aa25.35■■□□□ 1.65
FAM3A-216ENST00000449971 TRPM3Q9HCF6 1732 aaPredicted RBP25.34■■□□□ 1.65
FAM3A-216ENST00000449971 TRIM37O94972 964 aa25.34■■□□□ 1.65
FAM3A-216ENST00000449971 CHRNA2Q15822 529 aa25.34■■□□□ 1.65
FAM3A-216ENST00000449971 RGPD1P0DJD0 1748 aa25.33■■□□□ 1.65
FAM3A-216ENST00000449971 DLC1Q96QB1 1528 aa25.32■■□□□ 1.64
FAM3A-216ENST00000449971 SIN3AQ96ST3 1273 aa25.32■■□□□ 1.64
FAM3A-216ENST00000449971 USP35Q9P2H5 1018 aa25.31■■□□□ 1.64
FAM3A-216ENST00000449971 ALS2Q96Q42 1657 aa25.31■■□□□ 1.64
FAM3A-216ENST00000449971 WASLO00401 505 aaPredicted RBP25.3■■□□□ 1.64
FAM3A-216ENST00000449971 NEUROD1Q13562 356 aa25.3■■□□□ 1.64
FAM3A-216ENST00000449971 NUTM2GQ5VZR2 741 aa25.3■■□□□ 1.64
FAM3A-216ENST00000449971 ADGRB1O14514 1584 aa25.3■■□□□ 1.64
FAM3A-216ENST00000449971 ADGRB2O60241 1585 aa25.3■■□□□ 1.64
FAM3A-216ENST00000449971 EIF3AQ14152 1382 aaKnown RBP25.3■■□□□ 1.64
FAM3A-216ENST00000449971 KIAA0232Q92628 1395 aa25.29■■□□□ 1.64
FAM3A-216ENST00000449971 APBA3O96018 575 aa25.28■■□□□ 1.64
FAM3A-216ENST00000449971 ZC3H6P61129 1189 aaKnown RBP25.28■■□□□ 1.64
FAM3A-216ENST00000449971 TULP4Q9NRJ4 1543 aa25.27■■□□□ 1.64
FAM3A-216ENST00000449971 SPATA31A1Q5TZJ5 1347 aa25.27■■□□□ 1.64
FAM3A-216ENST00000449971 THSD7AQ9UPZ6 1657 aa25.26■■□□□ 1.63
FAM3A-216ENST00000449971 FAM196AQ6ZSG2 479 aa25.25■■□□□ 1.63
FAM3A-216ENST00000449971 L3MBTL2Q969R5 705 aa25.25■■□□□ 1.63
FAM3A-216ENST00000449971 TNS1Q9HBL0 1735 aaKnown RBP25.25■■□□□ 1.63
FAM3A-216ENST00000449971 DISP2A7MBM2 1401 aa25.24■■□□□ 1.63
FAM3A-216ENST00000449971 EVA1CP58658 441 aa25.24■■□□□ 1.63
FAM3A-216ENST00000449971 CAMKK2Q96RR4 588 aa25.24■■□□□ 1.63
FAM3A-216ENST00000449971 PDE3BQ13370 1112 aa25.21■■□□□ 1.63
FAM3A-216ENST00000449971 NBPF1Q3BBV0 1214 aa25.21■■□□□ 1.63
FAM3A-216ENST00000449971 NUDT16Q96DE0 195 aaKnown RBP25.21■■□□□ 1.63
FAM3A-216ENST00000449971 CRYBG1Q9Y4K1 1723 aa25.2■■□□□ 1.62
FAM3A-216ENST00000449971 LARP1Q6PKG0 1096 aaKnown RBP25.15■■□□□ 1.62
FAM3A-216ENST00000449971 ATP7BP35670 1465 aa25.15■■□□□ 1.62
FAM3A-216ENST00000449971 YY1P25490 414 aa25.14■■□□□ 1.62
FAM3A-216ENST00000449971 CDK19Q9BWU1 502 aa25.14■■□□□ 1.62
FAM3A-216ENST00000449971 SSH2Q76I76 1423 aa25.13■■□□□ 1.61
FAM3A-216ENST00000449971 PHRF1Q9P1Y6 1649 aaKnown RBP25.13■■□□□ 1.61
FAM3A-216ENST00000449971 NBPF8Q3BBV2 869 aa25.13■■□□□ 1.61
FAM3A-216ENST00000449971 NBPF14Q5TI25 921 aa25.13■■□□□ 1.61
FAM3A-216ENST00000449971 PPP1R1BQ9UD71 204 aaPredicted RBP25.13■■□□□ 1.61
FAM3A-216ENST00000449971 ZBTB7CA1YPR0 619 aa25.12■■□□□ 1.61
FAM3A-216ENST00000449971 ABTB2Q8N961 1025 aa25.12■■□□□ 1.61
FAM3A-216ENST00000449971 ACEP12821 1306 aa25.12■■□□□ 1.61
FAM3A-216ENST00000449971 PARD3Q8TEW0 1356 aa25.11■■□□□ 1.61
FAM3A-216ENST00000449971 BARGINQ6ZT62 677 aa25.11■■□□□ 1.61
FAM3A-216ENST00000449971 TCP11L2Q8N4U5 519 aa25.11■■□□□ 1.61
FAM3A-216ENST00000449971 ITSN1Q15811 1721 aa25.11■■□□□ 1.61
FAM3A-216ENST00000449971 KIAA1210Q9ULL0 1709 aa25.09■■□□□ 1.61
FAM3A-216ENST00000449971 ARHGEF28Q8N1W1 1705 aaKnown RBP25.07■■□□□ 1.6
FAM3A-216ENST00000449971 CAMTA1Q9Y6Y1 1673 aa25.07■■□□□ 1.6
FAM3A-216ENST00000449971 CCDC61Q9Y6R9 512 aa25.06■■□□□ 1.6
FAM3A-216ENST00000449971 NUP188Q5SRE5 1749 aa25.05■■□□□ 1.6
FAM3A-216ENST00000449971 SPON1Q9HCB6 807 aa25.04■■□□□ 1.6
FAM3A-216ENST00000449971 CENPJQ9HC77 1338 aaPredicted RBP25.04■■□□□ 1.6
FAM3A-216ENST00000449971 RREB1Q92766 1687 aa25.04■■□□□ 1.6
FAM3A-216ENST00000449971 NRKQ7Z2Y5 1582 aa25.03■■□□□ 1.6
FAM3A-216ENST00000449971 POLR3AO14802 1390 aaPredicted RBP25.03■■□□□ 1.6
FAM3A-216ENST00000449971 TONSLQ96HA7 1378 aa25.02■■□□□ 1.6
FAM3A-216ENST00000449971 DCAF8L1A6NGE4 600 aa25.01■■□□□ 1.59
FAM3A-216ENST00000449971 KCNQ2O43526 872 aa25.01■■□□□ 1.59
FAM3A-216ENST00000449971 ROCK2O75116 1388 aaKnown RBP25.01■■□□□ 1.59
FAM3A-216ENST00000449971 GCP02774 474 aa25■■□□□ 1.59
FAM3A-216ENST00000449971 SRPK2P78362 688 aaKnown RBP25■■□□□ 1.59
FAM3A-216ENST00000449971 NLRP13Q86W25 1043 aa25■■□□□ 1.59
FAM3A-216ENST00000449971 THRAP3Q9Y2W1 955 aaKnown RBP25■■□□□ 1.59
FAM3A-216ENST00000449971 PLEKHG3A1L390 1219 aa24.99■■□□□ 1.59
FAM3A-216ENST00000449971 CPDO75976 1380 aa24.98■■□□□ 1.59
FAM3A-216ENST00000449971 USP19O94966 1318 aa24.98■■□□□ 1.59
FAM3A-216ENST00000449971 TOPAZ1Q8N9V7 1692 aa24.97■■□□□ 1.59
FAM3A-216ENST00000449971 CABP2Q9NPB3 220 aa24.96■■□□□ 1.59
FAM3A-216ENST00000449971 LMO7Q8WWI1 1683 aa24.96■■□□□ 1.59
FAM3A-216ENST00000449971 COL5A2P05997 1499 aaPredicted RBP24.96■■□□□ 1.59
FAM3A-216ENST00000449971 PPIP5K1Q6PFW1 1433 aa24.95■■□□□ 1.58
FAM3A-216ENST00000449971 TOM1L2Q6ZVM7 507 aa24.93■■□□□ 1.58
FAM3A-216ENST00000449971 PTF1AQ7RTS3 328 aa24.93■■□□□ 1.58
FAM3A-216ENST00000449971 PCGF6Q9BYE7 350 aa24.93■■□□□ 1.58
FAM3A-216ENST00000449971 ANO8Q9HCE9 1232 aaPredicted RBP24.93■■□□□ 1.58
FAM3A-216ENST00000449971 OVOS2A0A0G2JMS6 1433 aa24.93■■□□□ 1.58
FAM3A-216ENST00000449971 OVOS2A0A0J9YW53 1432 aa24.93■■□□□ 1.58
FAM3A-216ENST00000449971 OVOS2Q6IE36 1432 aa24.93■■□□□ 1.58
FAM3A-216ENST00000449971 TRPM1Q7Z4N2 1603 aa24.93■■□□□ 1.58
FAM3A-216ENST00000449971 NLRP6P59044 892 aa24.92■■□□□ 1.58
FAM3A-216ENST00000449971 DDB1Q16531 1140 aa24.92■■□□□ 1.58
FAM3A-216ENST00000449971 BCL11BQ9C0K0 894 aaPredicted RBP24.92■■□□□ 1.58
FAM3A-216ENST00000449971 CRB1P82279 1406 aa24.92■■□□□ 1.58
FAM3A-216ENST00000449971 NINLQ9Y2I6 1382 aa24.92■■□□□ 1.58
FAM3A-216ENST00000449971 CARD11Q9BXL7 1154 aa24.91■■□□□ 1.58
FAM3A-216ENST00000449971 PARP4Q9UKK3 1724 aaKnown RBP24.9■■□□□ 1.58
FAM3A-216ENST00000449971 ZBTB7AO95365 584 aa24.9■■□□□ 1.58
FAM3A-216ENST00000449971 PDGFDQ9GZP0 370 aaPredicted RBP24.9■■□□□ 1.58
FAM3A-216ENST00000449971 C11orf95C9JLR9 678 aaPredicted RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms