RNA–Protein interactions for RNA: ENST00000449850.1

KDM1B-202, Transcript of lysine demethylase 1B, humanhuman

TSL 5

Gene KDM1B, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-202ENST00000449850 NCOA3Q9Y6Q9 1424 aa16.15■□□□□ 0.18
KDM1B-202ENST00000449850 MTHFSP49914 203 aa16.14■□□□□ 0.17
KDM1B-202ENST00000449850 KIF20BQ96Q89 1820 aa16.14■□□□□ 0.17
KDM1B-202ENST00000449850 ANKRD26Q9UPS8 1709 aa16.13■□□□□ 0.17
KDM1B-202ENST00000449850 PHF8Q9UPP1 1060 aa16.13■□□□□ 0.17
KDM1B-202ENST00000449850 ADAMTS8Q9UP79 889 aa16.12■□□□□ 0.17
KDM1B-202ENST00000449850 FBLN1P23142 703 aa16.12■□□□□ 0.17
KDM1B-202ENST00000449850 ESCO1Q5FWF5 840 aa16.12■□□□□ 0.17
KDM1B-202ENST00000449850 ORAI2Q96SN7 254 aa16.11■□□□□ 0.17
KDM1B-202ENST00000449850 DCCP43146 1447 aa16.1■□□□□ 0.17
KDM1B-202ENST00000449850 COG3Q96JB2 828 aa16.1■□□□□ 0.17
KDM1B-202ENST00000449850 C1orf167Q5SNV9 1468 aa16.1■□□□□ 0.17
KDM1B-202ENST00000449850 LRRC7Q96NW7 1537 aa16.1■□□□□ 0.17
KDM1B-202ENST00000449850 SENP3-EIF4A1A0A087X0R7 540 aa16.09■□□□□ 0.17
KDM1B-202ENST00000449850 OVOS2A0A0J9YW53 1432 aa16.09■□□□□ 0.17
KDM1B-202ENST00000449850 OVOS2Q6IE36 1432 aa16.09■□□□□ 0.17
KDM1B-202ENST00000449850 TTC21AQ8NDW8 1320 aa16.09■□□□□ 0.17
KDM1B-202ENST00000449850 INSRP06213 1382 aa16.08■□□□□ 0.17
KDM1B-202ENST00000449850 WDR43Q15061 677 aaKnown RBP eCLIP16.08■□□□□ 0.16
KDM1B-202ENST00000449850 POLKQ9UBT6 870 aa16.08■□□□□ 0.16
KDM1B-202ENST00000449850 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
KDM1B-202ENST00000449850 BLMP54132 1417 aaPredicted RBP16.08■□□□□ 0.16
KDM1B-202ENST00000449850 MST1RQ04912 1400 aa16.08■□□□□ 0.16
KDM1B-202ENST00000449850 ATF3P18847 181 aa16.07■□□□□ 0.16
KDM1B-202ENST00000449850 ZBED9Q6R2W3 1325 aa16.07■□□□□ 0.16
KDM1B-202ENST00000449850 XIRP1Q702N8 1843 aaKnown RBP16.06■□□□□ 0.16
KDM1B-202ENST00000449850 AATKQ6ZMQ8 1374 aa16.06■□□□□ 0.16
KDM1B-202ENST00000449850 MSH6P52701 1360 aa16.06■□□□□ 0.16
KDM1B-202ENST00000449850 CADPS2Q86UW7 1296 aa16.06■□□□□ 0.16
KDM1B-202ENST00000449850 PNPLA6Q8IY17 1366 aa16.06■□□□□ 0.16
KDM1B-202ENST00000449850 SHPRHQ149N8 1683 aa16.05■□□□□ 0.16
KDM1B-202ENST00000449850 COL3A1P02461 1466 aaPredicted RBP16.05■□□□□ 0.16
KDM1B-202ENST00000449850 USP31Q70CQ4 1352 aa16.05■□□□□ 0.16
KDM1B-202ENST00000449850 FOXO3O43524 673 aa16.05■□□□□ 0.16
KDM1B-202ENST00000449850 EMILIN1Q9Y6C2 1016 aa16.05■□□□□ 0.16
KDM1B-202ENST00000449850 CFAP53Q96M91 514 aa16.04■□□□□ 0.16
KDM1B-202ENST00000449850 PIK3C2AO00443 1686 aa16.04■□□□□ 0.16
KDM1B-202ENST00000449850 RRS1Q15050 365 aaKnown RBP16.04■□□□□ 0.16
KDM1B-202ENST00000449850 SMG6Q86US8 1419 aaKnown RBP16.03■□□□□ 0.16
KDM1B-202ENST00000449850 PSME1Q06323 249 aa16.03■□□□□ 0.16
KDM1B-202ENST00000449850 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.16
KDM1B-202ENST00000449850 PPM1GO15355 546 aaPredicted RBP16.02■□□□□ 0.15
KDM1B-202ENST00000449850 NLRP6P59044 892 aa16.02■□□□□ 0.15
KDM1B-202ENST00000449850 XPCQ01831 940 aaPredicted RBP16.02■□□□□ 0.15
KDM1B-202ENST00000449850 NUTM2GQ5VZR2 741 aa16.02■□□□□ 0.15
KDM1B-202ENST00000449850 ABTB2Q8N961 1025 aa16.01■□□□□ 0.15
KDM1B-202ENST00000449850 CCDC146Q8IYE0 955 aa16.01■□□□□ 0.15
KDM1B-202ENST00000449850 MAP2P11137 1827 aaKnown RBP16■□□□□ 0.15
KDM1B-202ENST00000449850 SOX12O15370 315 aa15.99■□□□□ 0.15
KDM1B-202ENST00000449850 DDX17Q92841 729 aaKnown RBP15.99■□□□□ 0.15
KDM1B-202ENST00000449850 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
KDM1B-202ENST00000449850 CDK12Q9NYV4 1490 aaPredicted RBP15.98■□□□□ 0.15
KDM1B-202ENST00000449850 KIF1AQ12756 1690 aa15.98■□□□□ 0.15
KDM1B-202ENST00000449850 DIAPH1O60610 1272 aaKnown RBP15.98■□□□□ 0.15
KDM1B-202ENST00000449850 KRT28Q7Z3Y7 464 aa15.98■□□□□ 0.15
KDM1B-202ENST00000449850 MARF1Q9Y4F3 1742 aaKnown RBP15.98■□□□□ 0.15
KDM1B-202ENST00000449850 USP54Q70EL1 1684 aa15.97■□□□□ 0.15
KDM1B-202ENST00000449850 U2AF1L5P0DN76 240 aaPredicted RBP15.97■□□□□ 0.15
KDM1B-202ENST00000449850 U2AF1Q01081 240 aaKnown RBP eCLIP15.97■□□□□ 0.15
KDM1B-202ENST00000449850 BRINP3Q76B58 766 aa15.96■□□□□ 0.15
KDM1B-202ENST00000449850 SLAIN2Q9P270 581 aa15.96■□□□□ 0.15
KDM1B-202ENST00000449850 MAP3K19Q56UN5 1328 aa15.96■□□□□ 0.15
KDM1B-202ENST00000449850 APAF1O14727 1248 aa15.95■□□□□ 0.14
KDM1B-202ENST00000449850 NUDCQ9Y266 331 aa15.95■□□□□ 0.14
KDM1B-202ENST00000449850 TRPM3Q9HCF6 1732 aaPredicted RBP15.95■□□□□ 0.14
KDM1B-202ENST00000449850 U2SURPO15042 1029 aaKnown RBP15.95■□□□□ 0.14
KDM1B-202ENST00000449850 IL13P35225 146 aa15.95■□□□□ 0.14
KDM1B-202ENST00000449850 PEAK1Q9H792 1746 aa15.94■□□□□ 0.14
KDM1B-202ENST00000449850 LTBP4Q8N2S1 1624 aa15.94■□□□□ 0.14
KDM1B-202ENST00000449850 NPHP3Q7Z494 1330 aa15.93■□□□□ 0.14
KDM1B-202ENST00000449850 HSP90AB2PQ58FF8 381 aa15.93■□□□□ 0.14
KDM1B-202ENST00000449850 RUNDC1Q96C34 613 aa15.92■□□□□ 0.14
KDM1B-202ENST00000449850 PLEKHF1Q96S99 279 aa15.92■□□□□ 0.14
KDM1B-202ENST00000449850 ZNF521Q96K83 1311 aa15.92■□□□□ 0.14
KDM1B-202ENST00000449850 PXDNQ92626 1479 aa15.91■□□□□ 0.14
KDM1B-202ENST00000449850 EIF4A2Q14240 407 aaKnown RBP15.91■□□□□ 0.14
KDM1B-202ENST00000449850 SUPT16HQ9Y5B9 1047 aaKnown RBP15.91■□□□□ 0.14
KDM1B-202ENST00000449850 SBNO1A3KN83 1393 aa15.91■□□□□ 0.14
KDM1B-202ENST00000449850 IQSEC2Q5JU85 1478 aa15.91■□□□□ 0.14
KDM1B-202ENST00000449850 NFAT5O94916 1531 aa15.91■□□□□ 0.14
KDM1B-202ENST00000449850 LMOD2Q6P5Q4 547 aa15.9■□□□□ 0.14
KDM1B-202ENST00000449850 TCP11L2Q8N4U5 519 aa15.9■□□□□ 0.14
KDM1B-202ENST00000449850 USP19O94966 1318 aa15.9■□□□□ 0.14
KDM1B-202ENST00000449850 FLT4P35916 1363 aa15.9■□□□□ 0.14
KDM1B-202ENST00000449850 GCP02774 474 aa15.89■□□□□ 0.13
KDM1B-202ENST00000449850 CDCA7LQ96GN5 454 aa15.89■□□□□ 0.13
KDM1B-202ENST00000449850 ALS2Q96Q42 1657 aa15.89■□□□□ 0.13
KDM1B-202ENST00000449850 RSPH6AQ9H0K4 717 aa15.89■□□□□ 0.13
KDM1B-202ENST00000449850 SLIT3O75094 1523 aa15.88■□□□□ 0.13
KDM1B-202ENST00000449850 FCHSD2O94868 740 aa15.88■□□□□ 0.13
KDM1B-202ENST00000449850 HMOX1P09601 288 aa15.88■□□□□ 0.13
KDM1B-202ENST00000449850 HOXC9P31274 260 aa15.88■□□□□ 0.13
KDM1B-202ENST00000449850 AMPHP49418 695 aa15.88■□□□□ 0.13
KDM1B-202ENST00000449850 KCNH5Q8NCM2 988 aa15.88■□□□□ 0.13
KDM1B-202ENST00000449850 SPATA31A3Q5VYP0 1347 aa15.87■□□□□ 0.13
KDM1B-202ENST00000449850 PDE3BQ13370 1112 aa15.87■□□□□ 0.13
KDM1B-202ENST00000449850 RRP7AQ9Y3A4 280 aaKnown RBP15.87■□□□□ 0.13
KDM1B-202ENST00000449850 TNS3Q68CZ2 1445 aa15.87■□□□□ 0.13
KDM1B-202ENST00000449850 KIF24Q5T7B8 1368 aa15.87■□□□□ 0.13
KDM1B-202ENST00000449850 PLEKHG5O94827 1062 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms