RNA–Protein interactions for RNA: ENST00000449434.6

LINC00665-204, long intergenic non-protein coding RNA 665, humanhuman

TSL 2

Gene LINC00665, Length 651 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00665-204ENST00000449434 CDK19Q9BWU1 502 aa13.59□□□□□ -0.23
LINC00665-204ENST00000449434 QRICH2Q9H0J4 1663 aa13.59□□□□□ -0.23
LINC00665-204ENST00000449434 POLR3AO14802 1390 aaPredicted RBP13.58□□□□□ -0.23
LINC00665-204ENST00000449434 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
LINC00665-204ENST00000449434 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
LINC00665-204ENST00000449434 CCDC9Q9Y3X0 531 aaKnown RBP13.58□□□□□ -0.24
LINC00665-204ENST00000449434 CCDC61Q9Y6R9 512 aa13.58□□□□□ -0.24
LINC00665-204ENST00000449434 BLMP54132 1417 aaPredicted RBP13.57□□□□□ -0.24
LINC00665-204ENST00000449434 SEPT12Q8IYM1 358 aa13.57□□□□□ -0.24
LINC00665-204ENST00000449434 PLEKHG3A1L390 1219 aa13.56□□□□□ -0.24
LINC00665-204ENST00000449434 NBPF1Q3BBV0 1214 aa13.56□□□□□ -0.24
LINC00665-204ENST00000449434 BTG4Q9NY30 223 aa13.56□□□□□ -0.24
LINC00665-204ENST00000449434 TRPM1Q7Z4N2 1603 aa13.55□□□□□ -0.24
LINC00665-204ENST00000449434 CENPJQ9HC77 1338 aaPredicted RBP13.55□□□□□ -0.24
LINC00665-204ENST00000449434 KRT27Q7Z3Y8 459 aa13.54□□□□□ -0.24
LINC00665-204ENST00000449434 PRDM11Q9NQV5 511 aa13.54□□□□□ -0.24
LINC00665-204ENST00000449434 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
LINC00665-204ENST00000449434 ACEP12821 1306 aa13.54□□□□□ -0.24
LINC00665-204ENST00000449434 SF3B2Q13435 895 aaKnown RBP13.53□□□□□ -0.24
LINC00665-204ENST00000449434 NBPF8Q3BBV2 869 aa13.53□□□□□ -0.24
LINC00665-204ENST00000449434 BRD4O60885 1362 aaPredicted RBP13.53□□□□□ -0.24
LINC00665-204ENST00000449434 THSD7AQ9UPZ6 1657 aa13.53□□□□□ -0.24
LINC00665-204ENST00000449434 L3MBTL2Q969R5 705 aa13.52□□□□□ -0.25
LINC00665-204ENST00000449434 SPATA31A5Q5VU36 1347 aa13.52□□□□□ -0.25
LINC00665-204ENST00000449434 SPATA31A7Q8IWB4 1347 aa13.52□□□□□ -0.25
LINC00665-204ENST00000449434 RGPD1P0DJD0 1748 aa13.52□□□□□ -0.25
LINC00665-204ENST00000449434 NRKQ7Z2Y5 1582 aa13.51□□□□□ -0.25
LINC00665-204ENST00000449434 PPIP5K1Q6PFW1 1433 aa13.51□□□□□ -0.25
LINC00665-204ENST00000449434 KIAA0232Q92628 1395 aa13.51□□□□□ -0.25
LINC00665-204ENST00000449434 SRPK2P78362 688 aaKnown RBP13.51□□□□□ -0.25
LINC00665-204ENST00000449434 FAM98CQ17RN3 349 aaKnown RBP13.51□□□□□ -0.25
LINC00665-204ENST00000449434 A0A0G2JS52 829 aa13.5□□□□□ -0.25
LINC00665-204ENST00000449434 MYT1Q01538 1121 aa13.5□□□□□ -0.25
LINC00665-204ENST00000449434 ABTB2Q8N961 1025 aa13.49□□□□□ -0.25
LINC00665-204ENST00000449434 LMO7Q8WWI1 1683 aa13.49□□□□□ -0.25
LINC00665-204ENST00000449434 AKAP12Q02952 1782 aa13.48□□□□□ -0.25
LINC00665-204ENST00000449434 CPDO75976 1380 aa13.48□□□□□ -0.25
LINC00665-204ENST00000449434 USP19O94966 1318 aa13.48□□□□□ -0.25
LINC00665-204ENST00000449434 NLRP13Q86W25 1043 aa13.48□□□□□ -0.25
LINC00665-204ENST00000449434 SPATA31A1Q5TZJ5 1347 aa13.47□□□□□ -0.25
LINC00665-204ENST00000449434 EVC2Q86UK5 1308 aa13.47□□□□□ -0.25
LINC00665-204ENST00000449434 ZC3H6P61129 1189 aaKnown RBP13.47□□□□□ -0.25
LINC00665-204ENST00000449434 NUTM2GQ5VZR2 741 aa13.47□□□□□ -0.25
LINC00665-204ENST00000449434 CABP2Q9NPB3 220 aa13.47□□□□□ -0.25
LINC00665-204ENST00000449434 ROCK2O75116 1388 aaKnown RBP13.46□□□□□ -0.25
LINC00665-204ENST00000449434 BAG6P46379 1132 aa13.46□□□□□ -0.25
LINC00665-204ENST00000449434 CHRNA2Q15822 529 aa13.46□□□□□ -0.25
LINC00665-204ENST00000449434 SIN3AQ96ST3 1273 aa13.46□□□□□ -0.25
LINC00665-204ENST00000449434 TNS1Q9HBL0 1735 aaKnown RBP13.46□□□□□ -0.25
LINC00665-204ENST00000449434 USP6P35125 1406 aa13.46□□□□□ -0.26
LINC00665-204ENST00000449434 CAMTA1Q9Y6Y1 1673 aa13.45□□□□□ -0.26
LINC00665-204ENST00000449434 EVA1CP58658 441 aa13.45□□□□□ -0.26
LINC00665-204ENST00000449434 NEUROD1Q13562 356 aa13.45□□□□□ -0.26
LINC00665-204ENST00000449434 DEFB132Q7Z7B7 95 aa13.45□□□□□ -0.26
LINC00665-204ENST00000449434 SSH2Q76I76 1423 aa13.45□□□□□ -0.26
LINC00665-204ENST00000449434 GCP02774 474 aa13.44□□□□□ -0.26
LINC00665-204ENST00000449434 BARGINQ6ZT62 677 aa13.44□□□□□ -0.26
LINC00665-204ENST00000449434 STRN4Q9NRL3 753 aa13.44□□□□□ -0.26
LINC00665-204ENST00000449434 CABP1Q9NZU7 370 aa13.44□□□□□ -0.26
LINC00665-204ENST00000449434 SLIT3O75094 1523 aa13.44□□□□□ -0.26
LINC00665-204ENST00000449434 PIK3C2AO00443 1686 aa13.44□□□□□ -0.26
LINC00665-204ENST00000449434 DISP2A7MBM2 1401 aa13.43□□□□□ -0.26
LINC00665-204ENST00000449434 SRCAPQ6ZRS2 3230 aa13.43□□□□□ -0.26
LINC00665-204ENST00000449434 PARP4Q9UKK3 1724 aaKnown RBP13.43□□□□□ -0.26
LINC00665-204ENST00000449434 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
LINC00665-204ENST00000449434 THRAP3Q9Y2W1 955 aaKnown RBP13.42□□□□□ -0.26
LINC00665-204ENST00000449434 SBNO2Q9Y2G9 1366 aa13.42□□□□□ -0.26
LINC00665-204ENST00000449434 COL18A1P39060 1754 aa13.41□□□□□ -0.26
LINC00665-204ENST00000449434 FAM196AQ6ZSG2 479 aa13.41□□□□□ -0.26
LINC00665-204ENST00000449434 MON2Q7Z3U7 1717 aa13.41□□□□□ -0.26
LINC00665-204ENST00000449434 COL5A2P05997 1499 aaPredicted RBP13.41□□□□□ -0.26
LINC00665-204ENST00000449434 RGPD5Q99666 1765 aa13.4□□□□□ -0.26
LINC00665-204ENST00000449434 LRP5O75197 1615 aa13.4□□□□□ -0.26
LINC00665-204ENST00000449434 NLRP6P59044 892 aa13.4□□□□□ -0.26
LINC00665-204ENST00000449434 TCP11L2Q8N4U5 519 aa13.4□□□□□ -0.26
LINC00665-204ENST00000449434 WNK3Q9BYP7 1800 aa13.4□□□□□ -0.26
LINC00665-204ENST00000449434 AATKQ6ZMQ8 1374 aa13.4□□□□□ -0.26
LINC00665-204ENST00000449434 TTC21AQ8NDW8 1320 aa13.39□□□□□ -0.27
LINC00665-204ENST00000449434 LARP1Q6PKG0 1096 aaKnown RBP13.39□□□□□ -0.27
LINC00665-204ENST00000449434 USP54Q70EL1 1684 aa13.38□□□□□ -0.27
LINC00665-204ENST00000449434 C11orf95C9JLR9 678 aaPredicted RBP13.38□□□□□ -0.27
LINC00665-204ENST00000449434 PDE3BQ13370 1112 aa13.38□□□□□ -0.27
LINC00665-204ENST00000449434 FAM182BQ5T319 152 aa13.38□□□□□ -0.27
LINC00665-204ENST00000449434 USP35Q9P2H5 1018 aa13.38□□□□□ -0.27
LINC00665-204ENST00000449434 SBF2Q86WG5 1849 aa13.38□□□□□ -0.27
LINC00665-204ENST00000449434 CRB1P82279 1406 aa13.38□□□□□ -0.27
LINC00665-204ENST00000449434 CPSF1Q10570 1443 aaKnown RBP13.38□□□□□ -0.27
LINC00665-204ENST00000449434 PARD3Q8TEW0 1356 aa13.37□□□□□ -0.27
LINC00665-204ENST00000449434 EN1Q05925 392 aaPredicted RBP13.37□□□□□ -0.27
LINC00665-204ENST00000449434 KCNH5Q8NCM2 988 aa13.37□□□□□ -0.27
LINC00665-204ENST00000449434 TTC21BQ7Z4L5 1316 aa13.37□□□□□ -0.27
LINC00665-204ENST00000449434 TONSLQ96HA7 1378 aa13.36□□□□□ -0.27
LINC00665-204ENST00000449434 ABCC6O95255 1503 aa13.36□□□□□ -0.27
LINC00665-204ENST00000449434 CARD11Q9BXL7 1154 aa13.36□□□□□ -0.27
LINC00665-204ENST00000449434 RREB1Q92766 1687 aa13.36□□□□□ -0.27
LINC00665-204ENST00000449434 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
LINC00665-204ENST00000449434 TRIM37O94972 964 aa13.35□□□□□ -0.27
LINC00665-204ENST00000449434 RGPD3A6NKT7 1758 aaPredicted RBP13.34□□□□□ -0.27
LINC00665-204ENST00000449434 RGPD4Q7Z3J3 1758 aa13.34□□□□□ -0.27
LINC00665-204ENST00000449434 LRRC37A3O60309 1634 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms