RNA–Protein interactions for RNA: ENST00000449337.6

RORA-204, Transcript of RAR related orphan receptor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RORA, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-204ENST00000449337 BRWD3Q6RI45 1802 aa28.52■■■□□ 2.16
RORA-204ENST00000449337 VPS72Q15906 364 aa28.52■■■□□ 2.16
RORA-204ENST00000449337 QRICH2Q9H0J4 1663 aa28.51■■■□□ 2.16
RORA-204ENST00000449337 NRAPQ86VF7 1730 aa28.51■■■□□ 2.15
RORA-204ENST00000449337 CENPJQ9HC77 1338 aaPredicted RBP28.51■■■□□ 2.15
RORA-204ENST00000449337 TRPM1Q7Z4N2 1603 aa28.5■■■□□ 2.15
RORA-204ENST00000449337 CCDC61Q9Y6R9 512 aa28.49■■■□□ 2.15
RORA-204ENST00000449337 ACEP12821 1306 aa28.49■■■□□ 2.15
RORA-204ENST00000449337 POLR3AO14802 1390 aaPredicted RBP28.49■■■□□ 2.15
RORA-204ENST00000449337 COL14A1Q05707 1796 aaKnown RBP28.48■■■□□ 2.15
RORA-204ENST00000449337 CCDC9Q9Y3X0 531 aaKnown RBP28.47■■■□□ 2.15
RORA-204ENST00000449337 BTG4Q9NY30 223 aa28.46■■■□□ 2.15
RORA-204ENST00000449337 PLEKHG3A1L390 1219 aa28.46■■■□□ 2.15
RORA-204ENST00000449337 NBPF8Q3BBV2 869 aa28.46■■■□□ 2.15
RORA-204ENST00000449337 SRPK2P78362 688 aaKnown RBP28.45■■■□□ 2.14
RORA-204ENST00000449337 NUTM2GQ5VZR2 741 aa28.45■■■□□ 2.14
RORA-204ENST00000449337 CABP2Q9NPB3 220 aa28.45■■■□□ 2.14
RORA-204ENST00000449337 PHRF1Q9P1Y6 1649 aaKnown RBP28.45■■■□□ 2.14
RORA-204ENST00000449337 SEPT12Q8IYM1 358 aa28.44■■■□□ 2.14
RORA-204ENST00000449337 PPIP5K1Q6PFW1 1433 aa28.42■■■□□ 2.14
RORA-204ENST00000449337 ONECUT3O60422 494 aaPredicted RBP28.4■■■□□ 2.14
RORA-204ENST00000449337 PRDM11Q9NQV5 511 aa28.4■■■□□ 2.14
RORA-204ENST00000449337 KIAA0232Q92628 1395 aa28.39■■■□□ 2.14
RORA-204ENST00000449337 ROCK2O75116 1388 aaKnown RBP28.38■■■□□ 2.13
RORA-204ENST00000449337 CHRNA2Q15822 529 aa28.36■■■□□ 2.13
RORA-204ENST00000449337 FAM98CQ17RN3 349 aaKnown RBP28.35■■■□□ 2.13
RORA-204ENST00000449337 ZC3H6P61129 1189 aaKnown RBP28.35■■■□□ 2.13
RORA-204ENST00000449337 ABTB2Q8N961 1025 aa28.34■■■□□ 2.13
RORA-204ENST00000449337 NRKQ7Z2Y5 1582 aa28.34■■■□□ 2.13
RORA-204ENST00000449337 CABP1Q9NZU7 370 aa28.33■■■□□ 2.13
RORA-204ENST00000449337 A0A0G2JS52 829 aa28.32■■■□□ 2.12
RORA-204ENST00000449337 MYT1Q01538 1121 aa28.32■■■□□ 2.12
RORA-204ENST00000449337 CCDC125Q86Z20 511 aa28.32■■■□□ 2.12
RORA-204ENST00000449337 SPATA31A5Q5VU36 1347 aa28.32■■■□□ 2.12
RORA-204ENST00000449337 SPATA31A7Q8IWB4 1347 aa28.32■■■□□ 2.12
RORA-204ENST00000449337 KRT27Q7Z3Y8 459 aa28.32■■■□□ 2.12
RORA-204ENST00000449337 BLMP54132 1417 aaPredicted RBP28.3■■■□□ 2.12
RORA-204ENST00000449337 EVC2Q86UK5 1308 aa28.29■■■□□ 2.12
RORA-204ENST00000449337 SRCAPQ6ZRS2 3230 aa28.29■■■□□ 2.12
RORA-204ENST00000449337 USP19O94966 1318 aa28.29■■■□□ 2.12
RORA-204ENST00000449337 USP6P35125 1406 aa28.27■■■□□ 2.12
RORA-204ENST00000449337 STRN4Q9NRL3 753 aa28.26■■■□□ 2.12
RORA-204ENST00000449337 THSD7AQ9UPZ6 1657 aa28.26■■■□□ 2.11
RORA-204ENST00000449337 LMO7Q8WWI1 1683 aa28.24■■■□□ 2.11
RORA-204ENST00000449337 CAMTA1Q9Y6Y1 1673 aa28.24■■■□□ 2.11
RORA-204ENST00000449337 SPATA31A1Q5TZJ5 1347 aa28.24■■■□□ 2.11
RORA-204ENST00000449337 DEFB132Q7Z7B7 95 aa28.23■■■□□ 2.11
RORA-204ENST00000449337 NLRP13Q86W25 1043 aa28.23■■■□□ 2.11
RORA-204ENST00000449337 SSH2Q76I76 1423 aa28.23■■■□□ 2.11
RORA-204ENST00000449337 BRD4O60885 1362 aaPredicted RBP28.22■■■□□ 2.11
RORA-204ENST00000449337 CPDO75976 1380 aa28.22■■■□□ 2.11
RORA-204ENST00000449337 PIK3C2AO00443 1686 aa28.22■■■□□ 2.11
RORA-204ENST00000449337 GCP02774 474 aa28.22■■■□□ 2.11
RORA-204ENST00000449337 FAM182BQ5T319 152 aa28.22■■■□□ 2.11
RORA-204ENST00000449337 TONSLQ96HA7 1378 aa28.21■■■□□ 2.11
RORA-204ENST00000449337 AKAP12Q02952 1782 aa28.2■■■□□ 2.11
RORA-204ENST00000449337 TRIM26Q12899 539 aaPredicted RBP28.19■■■□□ 2.1
RORA-204ENST00000449337 CARD11Q9BXL7 1154 aa28.19■■■□□ 2.1
RORA-204ENST00000449337 NLRP6P59044 892 aa28.18■■■□□ 2.1
RORA-204ENST00000449337 USP35Q9P2H5 1018 aa28.18■■■□□ 2.1
RORA-204ENST00000449337 ZRANB1Q9UGI0 708 aa28.18■■■□□ 2.1
RORA-204ENST00000449337 EVA1CP58658 441 aa28.17■■■□□ 2.1
RORA-204ENST00000449337 SF3B2Q13435 895 aaKnown RBP28.17■■■□□ 2.1
RORA-204ENST00000449337 LARP1Q6PKG0 1096 aaKnown RBP28.17■■■□□ 2.1
RORA-204ENST00000449337 SLIT3O75094 1523 aa28.17■■■□□ 2.1
RORA-204ENST00000449337 SBNO2Q9Y2G9 1366 aa28.14■■■□□ 2.1
RORA-204ENST00000449337 ZBTB7CA1YPR0 619 aa28.13■■■□□ 2.09
RORA-204ENST00000449337 TTC21BQ7Z4L5 1316 aa28.13■■■□□ 2.09
RORA-204ENST00000449337 COL5A2P05997 1499 aaPredicted RBP28.12■■■□□ 2.09
RORA-204ENST00000449337 CPSF1Q10570 1443 aaKnown RBP28.12■■■□□ 2.09
RORA-204ENST00000449337 ZNF692Q9BU19 519 aaPredicted RBP28.11■■■□□ 2.09
RORA-204ENST00000449337 RGPD1P0DJD0 1748 aa28.1■■■□□ 2.09
RORA-204ENST00000449337 MON2Q7Z3U7 1717 aa28.09■■■□□ 2.09
RORA-204ENST00000449337 COL18A1P39060 1754 aa28.09■■■□□ 2.09
RORA-204ENST00000449337 BARGINQ6ZT62 677 aa28.09■■■□□ 2.09
RORA-204ENST00000449337 KTN1Q86UP2 1357 aaKnown RBP28.08■■■□□ 2.09
RORA-204ENST00000449337 TNS1Q9HBL0 1735 aaKnown RBP28.08■■■□□ 2.08
RORA-204ENST00000449337 AATKQ6ZMQ8 1374 aa28.07■■■□□ 2.08
RORA-204ENST00000449337 TCP11L2Q8N4U5 519 aa28.06■■■□□ 2.08
RORA-204ENST00000449337 BAG6P46379 1132 aa28.05■■■□□ 2.08
RORA-204ENST00000449337 CD163L1Q9NR16 1453 aa28.05■■■□□ 2.08
RORA-204ENST00000449337 TTC21AQ8NDW8 1320 aa28.04■■■□□ 2.08
RORA-204ENST00000449337 SOX12O15370 315 aa28.04■■■□□ 2.08
RORA-204ENST00000449337 RGPD5Q99666 1765 aa28.03■■■□□ 2.08
RORA-204ENST00000449337 EN1Q05925 392 aaPredicted RBP28.03■■■□□ 2.08
RORA-204ENST00000449337 AXIN2Q9Y2T1 843 aa28.03■■■□□ 2.08
RORA-204ENST00000449337 CRB1P82279 1406 aa28.02■■■□□ 2.08
RORA-204ENST00000449337 TMC1Q8TDI8 760 aa28.01■■■□□ 2.07
RORA-204ENST00000449337 PARP4Q9UKK3 1724 aaKnown RBP28.01■■■□□ 2.07
RORA-204ENST00000449337 NFAT5O94916 1531 aa28.01■■■□□ 2.07
RORA-204ENST00000449337 FAM196AQ6ZSG2 479 aa28.01■■■□□ 2.07
RORA-204ENST00000449337 ARHGEF25Q86VW2 580 aa28.01■■■□□ 2.07
RORA-204ENST00000449337 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.01■■■□□ 2.07
RORA-204ENST00000449337 SLC12A5Q9H2X9 1139 aa28■■■□□ 2.07
RORA-204ENST00000449337 THRAP3Q9Y2W1 955 aaKnown RBP28■■■□□ 2.07
RORA-204ENST00000449337 TRIM37O94972 964 aa27.99■■■□□ 2.07
RORA-204ENST00000449337 PDE3BQ13370 1112 aa27.99■■■□□ 2.07
RORA-204ENST00000449337 KCNH5Q8NCM2 988 aa27.98■■■□□ 2.07
RORA-204ENST00000449337 TESK2Q96S53 571 aa27.97■■■□□ 2.07
RORA-204ENST00000449337 DISP2A7MBM2 1401 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms