RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 TTC21AQ8NDW8 1320 aa19.2■□□□□ 0.66
SHMT2-203ENST00000449049 PXDNQ92626 1479 aa19.2■□□□□ 0.66
SHMT2-203ENST00000449049 NPHP3Q7Z494 1330 aa19.19■□□□□ 0.66
SHMT2-203ENST00000449049 ANP32CO43423 234 aa19.19■□□□□ 0.66
SHMT2-203ENST00000449049 TOM1O60784 492 aa19.19■□□□□ 0.66
SHMT2-203ENST00000449049 PSME1Q06323 249 aa19.19■□□□□ 0.66
SHMT2-203ENST00000449049 PIK3C2AO00443 1686 aa19.19■□□□□ 0.66
SHMT2-203ENST00000449049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.18■□□□□ 0.66
SHMT2-203ENST00000449049 PARD3Q8TEW0 1356 aa19.18■□□□□ 0.66
SHMT2-203ENST00000449049 USP54Q70EL1 1684 aa19.18■□□□□ 0.66
SHMT2-203ENST00000449049 FYB1O15117 783 aa19.18■□□□□ 0.66
SHMT2-203ENST00000449049 CC2D1BQ5T0F9 858 aaKnown RBP19.18■□□□□ 0.66
SHMT2-203ENST00000449049 PRKRIP1Q9H875 184 aaPredicted RBP19.18■□□□□ 0.66
SHMT2-203ENST00000449049 KRT28Q7Z3Y7 464 aa19.16■□□□□ 0.66
SHMT2-203ENST00000449049 AHDC1Q5TGY3 1603 aaPredicted RBP19.16■□□□□ 0.66
SHMT2-203ENST00000449049 ALS2Q96Q42 1657 aa19.15■□□□□ 0.66
SHMT2-203ENST00000449049 NME9Q86XW9 330 aa19.15■□□□□ 0.66
SHMT2-203ENST00000449049 SBNO1A3KN83 1393 aa19.15■□□□□ 0.66
SHMT2-203ENST00000449049 RALBP1Q15311 655 aa19.15■□□□□ 0.66
SHMT2-203ENST00000449049 DDX17Q92841 729 aaKnown RBP19.15■□□□□ 0.66
SHMT2-203ENST00000449049 MARF1Q9Y4F3 1742 aaKnown RBP19.14■□□□□ 0.65
SHMT2-203ENST00000449049 UBAP1LF5GYI3 381 aa19.14■□□□□ 0.65
SHMT2-203ENST00000449049 GGNBP2Q9H3C7 697 aa19.14■□□□□ 0.65
SHMT2-203ENST00000449049 USP31Q70CQ4 1352 aa19.14■□□□□ 0.65
SHMT2-203ENST00000449049 OVOS2A0A0J9YW53 1432 aa19.14■□□□□ 0.65
SHMT2-203ENST00000449049 OVOS2Q6IE36 1432 aa19.14■□□□□ 0.65
SHMT2-203ENST00000449049 XPCQ01831 940 aaPredicted RBP19.13■□□□□ 0.65
SHMT2-203ENST00000449049 SOS2Q07890 1332 aaPredicted RBP19.13■□□□□ 0.65
SHMT2-203ENST00000449049 CNGB1Q14028 1251 aaPredicted RBP19.13■□□□□ 0.65
SHMT2-203ENST00000449049 PAK3O75914 559 aaPredicted RBP19.12■□□□□ 0.65
SHMT2-203ENST00000449049 MIER1Q8N108 512 aa19.12■□□□□ 0.65
SHMT2-203ENST00000449049 TNS3Q68CZ2 1445 aa19.11■□□□□ 0.65
SHMT2-203ENST00000449049 ZRANB1Q9UGI0 708 aa19.1■□□□□ 0.65
SHMT2-203ENST00000449049 MORC1Q86VD1 984 aa19.1■□□□□ 0.65
SHMT2-203ENST00000449049 ABTB2Q8N961 1025 aa19.09■□□□□ 0.65
SHMT2-203ENST00000449049 COG3Q96JB2 828 aa19.09■□□□□ 0.65
SHMT2-203ENST00000449049 SPATA31A3Q5VYP0 1347 aa19.08■□□□□ 0.65
SHMT2-203ENST00000449049 MYBBP1AQ9BQG0 1328 aaKnown RBP19.08■□□□□ 0.65
SHMT2-203ENST00000449049 SCAF1Q9H7N4 1312 aaKnown RBP19.08■□□□□ 0.65
SHMT2-203ENST00000449049 PIP4K2BP78356 416 aa19.08■□□□□ 0.64
SHMT2-203ENST00000449049 PHLPP1O60346 1717 aa19.08■□□□□ 0.64
SHMT2-203ENST00000449049 COL16A1Q07092 1604 aaPredicted RBP19.07■□□□□ 0.64
SHMT2-203ENST00000449049 MED1Q15648 1581 aaPredicted RBP19.06■□□□□ 0.64
SHMT2-203ENST00000449049 NLRP6P59044 892 aa19.06■□□□□ 0.64
SHMT2-203ENST00000449049 ARHGEF10O15013 1369 aa19.06■□□□□ 0.64
SHMT2-203ENST00000449049 CRYBG1Q9Y4K1 1723 aa19.06■□□□□ 0.64
SHMT2-203ENST00000449049 SLIT3O75094 1523 aa19.05■□□□□ 0.64
SHMT2-203ENST00000449049 PPP2R1AP30153 589 aa19.04■□□□□ 0.64
SHMT2-203ENST00000449049 NLRP13Q86W25 1043 aa19.04■□□□□ 0.64
SHMT2-203ENST00000449049 AATKQ6ZMQ8 1374 aa19.04■□□□□ 0.64
SHMT2-203ENST00000449049 USP19O94966 1318 aa19.04■□□□□ 0.64
SHMT2-203ENST00000449049 NUTM2GQ5VZR2 741 aa19.03■□□□□ 0.64
SHMT2-203ENST00000449049 PHRF1Q9P1Y6 1649 aaKnown RBP19.03■□□□□ 0.64
SHMT2-203ENST00000449049 CCER2I3L3R5 266 aa19.03■□□□□ 0.64
SHMT2-203ENST00000449049 NFAT5O94916 1531 aa19.02■□□□□ 0.63
SHMT2-203ENST00000449049 TNNT2P45379 298 aaPredicted RBP19.01■□□□□ 0.63
SHMT2-203ENST00000449049 LMOD2Q6P5Q4 547 aa19.01■□□□□ 0.63
SHMT2-203ENST00000449049 COL22A1Q8NFW1 1626 aaPredicted RBP19.01■□□□□ 0.63
SHMT2-203ENST00000449049 SMG6Q86US8 1419 aaKnown RBP19.01■□□□□ 0.63
SHMT2-203ENST00000449049 ABCA3Q99758 1704 aa19■□□□□ 0.63
SHMT2-203ENST00000449049 LRRC59Q96AG4 307 aaKnown RBP19■□□□□ 0.63
SHMT2-203ENST00000449049 MAP2P11137 1827 aaKnown RBP18.99■□□□□ 0.63
SHMT2-203ENST00000449049 MYT1Q01538 1121 aa18.98■□□□□ 0.63
SHMT2-203ENST00000449049 KCNH5Q8NCM2 988 aa18.98■□□□□ 0.63
SHMT2-203ENST00000449049 PNPLA6Q8IY17 1366 aa18.97■□□□□ 0.63
SHMT2-203ENST00000449049 FBLN1P23142 703 aa18.97■□□□□ 0.63
SHMT2-203ENST00000449049 POLKQ9UBT6 870 aa18.97■□□□□ 0.63
SHMT2-203ENST00000449049 CCDC184Q52MB2 194 aa18.96■□□□□ 0.63
SHMT2-203ENST00000449049 LTN1O94822 1766 aa18.96■□□□□ 0.63
SHMT2-203ENST00000449049 PEAK1Q9H792 1746 aa18.96■□□□□ 0.63
SHMT2-203ENST00000449049 GCP02774 474 aa18.95■□□□□ 0.62
SHMT2-203ENST00000449049 MTHFSP49914 203 aa18.95■□□□□ 0.62
SHMT2-203ENST00000449049 CDK12Q9NYV4 1490 aaPredicted RBP18.95■□□□□ 0.62
SHMT2-203ENST00000449049 SHPRHQ149N8 1683 aa18.95■□□□□ 0.62
SHMT2-203ENST00000449049 SOX12O15370 315 aa18.94■□□□□ 0.62
SHMT2-203ENST00000449049 RRS1Q15050 365 aaKnown RBP18.94■□□□□ 0.62
SHMT2-203ENST00000449049 EMILIN1Q9Y6C2 1016 aa18.94■□□□□ 0.62
SHMT2-203ENST00000449049 KIF24Q5T7B8 1368 aa18.93■□□□□ 0.62
SHMT2-203ENST00000449049 MAP3K19Q56UN5 1328 aa18.93■□□□□ 0.62
SHMT2-203ENST00000449049 MRS2Q9HD23 443 aa18.93■□□□□ 0.62
SHMT2-203ENST00000449049 INSRP06213 1382 aa18.93■□□□□ 0.62
SHMT2-203ENST00000449049 COL3A1P02461 1466 aaPredicted RBP18.93■□□□□ 0.62
SHMT2-203ENST00000449049 CABLES1Q8TDN4 633 aa18.92■□□□□ 0.62
SHMT2-203ENST00000449049 RTL1A6NKG5 1358 aa18.91■□□□□ 0.62
SHMT2-203ENST00000449049 PLEKHG5O94827 1062 aa18.9■□□□□ 0.62
SHMT2-203ENST00000449049 ARHGEF25Q86VW2 580 aa18.9■□□□□ 0.62
SHMT2-203ENST00000449049 CPDO75976 1380 aa18.9■□□□□ 0.62
SHMT2-203ENST00000449049 FLT4P35916 1363 aa18.9■□□□□ 0.62
SHMT2-203ENST00000449049 ABCC6O95255 1503 aa18.9■□□□□ 0.62
SHMT2-203ENST00000449049 CFAP53Q96M91 514 aa18.89■□□□□ 0.62
SHMT2-203ENST00000449049 JCADQ9P266 1359 aa18.89■□□□□ 0.61
SHMT2-203ENST00000449049 HSPA1LP34931 641 aa18.88■□□□□ 0.61
SHMT2-203ENST00000449049 COL18A1P39060 1754 aa18.88■□□□□ 0.61
SHMT2-203ENST00000449049 PPM1GO15355 546 aaPredicted RBP18.88■□□□□ 0.61
SHMT2-203ENST00000449049 AMPHP49418 695 aa18.86■□□□□ 0.61
SHMT2-203ENST00000449049 HOXC9P31274 260 aa18.86■□□□□ 0.61
SHMT2-203ENST00000449049 PNISRQ8TF01 805 aaKnown RBP18.86■□□□□ 0.61
SHMT2-203ENST00000449049 KIAA0232Q92628 1395 aa18.86■□□□□ 0.61
SHMT2-203ENST00000449049 ZC3H6P61129 1189 aaKnown RBP18.85■□□□□ 0.61
SHMT2-203ENST00000449049 IP6K1Q92551 441 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms