RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 BECN1Q14457 450 aa10.85□□□□□ -0.67
CPSF7-206ENST00000448745 SKAP1Q86WV1 359 aa10.85□□□□□ -0.67
CPSF7-206ENST00000448745 CPS1P31327 1500 aa10.85□□□□□ -0.67
CPSF7-206ENST00000448745 DLC1Q96QB1 1528 aa10.85□□□□□ -0.67
CPSF7-206ENST00000448745 SLC4A3P48751 1232 aa10.84□□□□□ -0.67
CPSF7-206ENST00000448745 NWD1Q149M9 1564 aa10.84□□□□□ -0.67
CPSF7-206ENST00000448745 MAPK8IP3Q9UPT6 1336 aa10.84□□□□□ -0.67
CPSF7-206ENST00000448745 TRMT2AQ8IZ69 625 aaKnown RBP10.84□□□□□ -0.67
CPSF7-206ENST00000448745 CGNL1Q0VF96 1302 aa10.83□□□□□ -0.68
CPSF7-206ENST00000448745 ROBO2Q9HCK4 1378 aa10.83□□□□□ -0.68
CPSF7-206ENST00000448745 RSPH6AQ9H0K4 717 aa10.83□□□□□ -0.68
CPSF7-206ENST00000448745 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.83□□□□□ -0.68
CPSF7-206ENST00000448745 TRAK1Q9UPV9 953 aa10.83□□□□□ -0.68
CPSF7-206ENST00000448745 E9PSI1 815 aa10.82□□□□□ -0.68
CPSF7-206ENST00000448745 FRAT2O75474 233 aaPredicted RBP10.82□□□□□ -0.68
CPSF7-206ENST00000448745 RGS3P49796 1198 aa10.82□□□□□ -0.68
CPSF7-206ENST00000448745 STK26Q9P289 416 aa10.82□□□□□ -0.68
CPSF7-206ENST00000448745 KCNA6P17658 529 aa10.81□□□□□ -0.68
CPSF7-206ENST00000448745 AMER1Q5JTC6 1135 aaPredicted RBP10.81□□□□□ -0.68
CPSF7-206ENST00000448745 L1TD1Q5T7N2 865 aaKnown RBP10.81□□□□□ -0.68
CPSF7-206ENST00000448745 SIRT1Q96EB6 747 aa10.81□□□□□ -0.68
CPSF7-206ENST00000448745 AMOTL2Q9Y2J4 779 aa10.81□□□□□ -0.68
CPSF7-206ENST00000448745 PTCH1Q13635 1447 aa10.81□□□□□ -0.68
CPSF7-206ENST00000448745 FAM135BQ49AJ0 1406 aa10.81□□□□□ -0.68
CPSF7-206ENST00000448745 AAMPQ13685 434 aa10.81□□□□□ -0.68
CPSF7-206ENST00000448745 QRICH2Q9H0J4 1663 aa10.8□□□□□ -0.68
CPSF7-206ENST00000448745 SBNO2Q9Y2G9 1366 aa10.8□□□□□ -0.68
CPSF7-206ENST00000448745 PDE3AQ14432 1141 aa10.8□□□□□ -0.68
CPSF7-206ENST00000448745 WAPLQ7Z5K2 1190 aa10.8□□□□□ -0.68
CPSF7-206ENST00000448745 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.8□□□□□ -0.68
CPSF7-206ENST00000448745 SLC24A1O60721 1099 aa10.79□□□□□ -0.68
CPSF7-206ENST00000448745 UBE2Q2Q8WVN8 375 aa10.79□□□□□ -0.68
CPSF7-206ENST00000448745 PRAM1Q96QH2 718 aa10.79□□□□□ -0.68
CPSF7-206ENST00000448745 CENPJQ9HC77 1338 aaPredicted RBP10.78□□□□□ -0.68
CPSF7-206ENST00000448745 XIRP1Q702N8 1843 aaKnown RBP10.77□□□□□ -0.69
CPSF7-206ENST00000448745 UPF2Q9HAU5 1272 aaKnown RBP10.77□□□□□ -0.69
CPSF7-206ENST00000448745 DMRT2Q9Y5R5 561 aa10.77□□□□□ -0.69
CPSF7-206ENST00000448745 ZNF335Q9H4Z2 1342 aaPredicted RBP10.77□□□□□ -0.69
CPSF7-206ENST00000448745 TULP4Q9NRJ4 1543 aa10.76□□□□□ -0.69
CPSF7-206ENST00000448745 PMFBP1Q8TBY8 1022 aa10.76□□□□□ -0.69
CPSF7-206ENST00000448745 USP19O94966 1318 aa10.76□□□□□ -0.69
CPSF7-206ENST00000448745 NALCNQ8IZF0 1738 aa10.76□□□□□ -0.69
CPSF7-206ENST00000448745 CANXP27824 592 aaKnown RBP10.75□□□□□ -0.69
CPSF7-206ENST00000448745 SAFB2Q14151 953 aaKnown RBP eCLIP10.75□□□□□ -0.69
CPSF7-206ENST00000448745 CLUAP1Q96AJ1 413 aa10.75□□□□□ -0.69
CPSF7-206ENST00000448745 ADGRB2O60241 1585 aa10.75□□□□□ -0.69
CPSF7-206ENST00000448745 LTBP4Q8N2S1 1624 aa10.75□□□□□ -0.69
CPSF7-206ENST00000448745 SHPRHQ149N8 1683 aa10.75□□□□□ -0.69
CPSF7-206ENST00000448745 LRRC7Q96NW7 1537 aa10.74□□□□□ -0.69
CPSF7-206ENST00000448745 RBM33Q96EV2 1170 aaKnown RBP10.74□□□□□ -0.69
CPSF7-206ENST00000448745 MINK1Q8N4C8 1332 aaPredicted RBP10.73□□□□□ -0.69
CPSF7-206ENST00000448745 APAF1O14727 1248 aa10.73□□□□□ -0.69
CPSF7-206ENST00000448745 IGHDP01880 384 aa10.73□□□□□ -0.69
CPSF7-206ENST00000448745 CCDC146Q8IYE0 955 aa10.73□□□□□ -0.69
CPSF7-206ENST00000448745 POGKQ9P215 609 aa10.73□□□□□ -0.69
CPSF7-206ENST00000448745 POLR3AO14802 1390 aaPredicted RBP10.73□□□□□ -0.69
CPSF7-206ENST00000448745 EIF5BO60841 1220 aaKnown RBP10.72□□□□□ -0.69
CPSF7-206ENST00000448745 BCAR3O75815 825 aa10.72□□□□□ -0.69
CPSF7-206ENST00000448745 USP32Q8NFA0 1604 aa10.72□□□□□ -0.69
CPSF7-206ENST00000448745 ADGRL3Q9HAR2 1447 aa10.72□□□□□ -0.69
CPSF7-206ENST00000448745 TMEM94Q12767 1356 aa10.72□□□□□ -0.69
CPSF7-206ENST00000448745 NCOA3Q9Y6Q9 1424 aa10.71□□□□□ -0.69
CPSF7-206ENST00000448745 CDC42BPGQ6DT37 1551 aa10.71□□□□□ -0.69
CPSF7-206ENST00000448745 PROSER2Q86WR7 435 aaPredicted RBP10.7□□□□□ -0.7
CPSF7-206ENST00000448745 TBC1D32Q96NH3 1257 aa10.7□□□□□ -0.7
CPSF7-206ENST00000448745 SPINK5Q9NQ38 1064 aaPredicted RBP10.7□□□□□ -0.7
CPSF7-206ENST00000448745 IQSEC2Q5JU85 1478 aa10.7□□□□□ -0.7
CPSF7-206ENST00000448745 FMN2Q9NZ56 1722 aa10.7□□□□□ -0.7
CPSF7-206ENST00000448745 WASLO00401 505 aaPredicted RBP10.7□□□□□ -0.7
CPSF7-206ENST00000448745 ANTXR1Q9H6X2 564 aa10.7□□□□□ -0.7
CPSF7-206ENST00000448745 PRR36Q9H6K5 1346 aa10.69□□□□□ -0.7
CPSF7-206ENST00000448745 CERKQ8TCT0 537 aa10.69□□□□□ -0.7
CPSF7-206ENST00000448745 PUS7Q96PZ0 661 aaKnown RBP10.69□□□□□ -0.7
CPSF7-206ENST00000448745 CDK19Q9BWU1 502 aa10.69□□□□□ -0.7
CPSF7-206ENST00000448745 RWDD1Q9H446 243 aaPredicted RBP10.69□□□□□ -0.7
CPSF7-206ENST00000448745 EVC2Q86UK5 1308 aa10.68□□□□□ -0.7
CPSF7-206ENST00000448745 ATP7BP35670 1465 aa10.68□□□□□ -0.7
CPSF7-206ENST00000448745 RGPD8O14715 1765 aaPredicted RBP10.68□□□□□ -0.7
CPSF7-206ENST00000448745 GOLGA6L3A6NEY3 463 aa10.68□□□□□ -0.7
CPSF7-206ENST00000448745 NCBP3Q53F19 620 aaKnown RBP10.68□□□□□ -0.7
CPSF7-206ENST00000448745 SLKQ9H2G2 1235 aaPredicted RBP10.68□□□□□ -0.7
CPSF7-206ENST00000448745 CABP2Q9NPB3 220 aa10.68□□□□□ -0.7
CPSF7-206ENST00000448745 COG6Q9Y2V7 657 aa10.68□□□□□ -0.7
CPSF7-206ENST00000448745 SEC24BO95487 1268 aa10.67□□□□□ -0.7
CPSF7-206ENST00000448745 WWC1Q8IX03 1113 aa10.67□□□□□ -0.7
CPSF7-206ENST00000448745 PANK1Q8TE04 598 aa10.67□□□□□ -0.7
CPSF7-206ENST00000448745 TOPAZ1Q8N9V7 1692 aa10.67□□□□□ -0.7
CPSF7-206ENST00000448745 DCCP43146 1447 aa10.67□□□□□ -0.7
CPSF7-206ENST00000448745 WDR63Q8IWG1 891 aa10.67□□□□□ -0.7
CPSF7-206ENST00000448745 RUNDC1Q96C34 613 aa10.67□□□□□ -0.7
CPSF7-206ENST00000448745 C19orf44Q9H6X5 657 aa10.67□□□□□ -0.7
CPSF7-206ENST00000448745 TBC1D2Q9BYX2 928 aa10.66□□□□□ -0.7
CPSF7-206ENST00000448745 PDZRN3Q9UPQ7 1066 aa10.66□□□□□ -0.7
CPSF7-206ENST00000448745 FSD2A1L4K1 749 aa10.65□□□□□ -0.7
CPSF7-206ENST00000448745 RARSP54136 660 aaKnown RBP10.65□□□□□ -0.7
CPSF7-206ENST00000448745 RRAGDQ9NQL2 400 aaPredicted RBP10.65□□□□□ -0.7
CPSF7-206ENST00000448745 CHMP5Q9NZZ3 219 aa10.65□□□□□ -0.7
CPSF7-206ENST00000448745 ISY1Q9ULR0 285 aaKnown RBP10.65□□□□□ -0.7
CPSF7-206ENST00000448745 CD163L1Q9NR16 1453 aa10.65□□□□□ -0.7
CPSF7-206ENST00000448745 MCM4P33991 863 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms