RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 BRPF1P55201 1214 aaPredicted RBP9.86□□□□□ -0.83
LPP-208ENST00000448637 AAMPQ13685 434 aa9.86□□□□□ -0.83
LPP-208ENST00000448637 TAX1BP1Q86VP1 789 aa9.86□□□□□ -0.83
LPP-208ENST00000448637 TANGO6Q9C0B7 1094 aa9.86□□□□□ -0.83
LPP-208ENST00000448637 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.86□□□□□ -0.83
LPP-208ENST00000448637 SEPT11Q9NVA2 429 aaKnown RBP9.86□□□□□ -0.83
LPP-208ENST00000448637 COG6Q9Y2V7 657 aa9.86□□□□□ -0.83
LPP-208ENST00000448637 RIPK4P57078 832 aa9.85□□□□□ -0.83
LPP-208ENST00000448637 ATP2B1P20020 1258 aa9.85□□□□□ -0.83
LPP-208ENST00000448637 CCDC57Q2TAC2 916 aa9.85□□□□□ -0.83
LPP-208ENST00000448637 NACAP1Q9BZK3 213 aa9.85□□□□□ -0.83
LPP-208ENST00000448637 USP8P40818 1118 aa9.85□□□□□ -0.83
LPP-208ENST00000448637 ATP2B2Q01814 1243 aa9.85□□□□□ -0.83
LPP-208ENST00000448637 JAKMIP3Q5VZ66 844 aa9.85□□□□□ -0.83
LPP-208ENST00000448637 ZHX3Q9H4I2 956 aa9.85□□□□□ -0.83
LPP-208ENST00000448637 NLRP2Q9NX02 1062 aa9.85□□□□□ -0.83
LPP-208ENST00000448637 STK38Q15208 465 aa9.85□□□□□ -0.83
LPP-208ENST00000448637 TRIM22Q8IYM9 498 aa9.85□□□□□ -0.83
LPP-208ENST00000448637 PANK3Q9H999 370 aa9.85□□□□□ -0.83
LPP-208ENST00000448637 RRP9O43818 475 aaKnown RBP9.85□□□□□ -0.83
LPP-208ENST00000448637 EIF3JO75822 258 aaKnown RBP9.85□□□□□ -0.83
LPP-208ENST00000448637 CLASRPQ8N2M8 674 aaKnown RBP9.85□□□□□ -0.83
LPP-208ENST00000448637 PPP1R1BQ9UD71 204 aaPredicted RBP9.85□□□□□ -0.83
LPP-208ENST00000448637 CDC45O75419 566 aa9.84□□□□□ -0.83
LPP-208ENST00000448637 MATR3P43243 847 aaKnown RBP eCLIP9.84□□□□□ -0.839e-7■■■■□ 19.3
LPP-208ENST00000448637 AIMP1Q12904 312 aaKnown RBP9.84□□□□□ -0.83
LPP-208ENST00000448637 NOL7Q9UMY1 257 aaKnown RBP9.84□□□□□ -0.83
LPP-208ENST00000448637 CUX2O14529 1486 aa9.84□□□□□ -0.83
LPP-208ENST00000448637 FEZ1Q99689 392 aa9.84□□□□□ -0.83
LPP-208ENST00000448637 MBD3O95983 291 aa9.84□□□□□ -0.83
LPP-208ENST00000448637 CCDC158Q5M9N0 1113 aa9.84□□□□□ -0.83
LPP-208ENST00000448637 PPM1EQ8WY54 764 aa9.84□□□□□ -0.83
LPP-208ENST00000448637 MINK1Q8N4C8 1332 aaPredicted RBP9.83□□□□□ -0.84
LPP-208ENST00000448637 EPB41L2O43491 1005 aaKnown RBP9.83□□□□□ -0.84
LPP-208ENST00000448637 MCM2P49736 904 aa9.83□□□□□ -0.84
LPP-208ENST00000448637 MRE11P49959 708 aa9.83□□□□□ -0.84
LPP-208ENST00000448637 HNRNPMP52272 730 aaKnown RBP eCLIP9.83□□□□□ -0.841e-6■■■■□ 21.3
LPP-208ENST00000448637 NFKBIBQ15653 356 aa9.83□□□□□ -0.84
LPP-208ENST00000448637 DYDC1Q8WWB3 177 aa9.83□□□□□ -0.84
LPP-208ENST00000448637 SLC26A8Q96RN1 970 aa9.83□□□□□ -0.84
LPP-208ENST00000448637 CBFA2T2O43439 604 aa9.83□□□□□ -0.84
LPP-208ENST00000448637 ANAPC15P60006 121 aa9.83□□□□□ -0.84
LPP-208ENST00000448637 TTC39AQ5SRH9 613 aa9.83□□□□□ -0.84
LPP-208ENST00000448637 TMEM87AQ8NBN3 555 aa9.83□□□□□ -0.84
LPP-208ENST00000448637 CCDC144AA2RUR9 1427 aa9.82□□□□□ -0.84
LPP-208ENST00000448637 SERPINC1P01008 464 aa9.82□□□□□ -0.84
LPP-208ENST00000448637 GNAI3P08754 354 aa9.82□□□□□ -0.84
LPP-208ENST00000448637 UBE2Q2Q8WVN8 375 aa9.82□□□□□ -0.84
LPP-208ENST00000448637 RRP1P56182 461 aaKnown RBP9.82□□□□□ -0.84
LPP-208ENST00000448637 TAF4BQ92750 862 aa9.82□□□□□ -0.84
LPP-208ENST00000448637 RAB3GAP2Q9H2M9 1393 aa9.82□□□□□ -0.84
LPP-208ENST00000448637 CNNM1Q9NRU3 951 aa9.82□□□□□ -0.84
LPP-208ENST00000448637 ZSCAN25Q6NSZ9 544 aa9.82□□□□□ -0.84
LPP-208ENST00000448637 CRBNQ96SW2 442 aa9.82□□□□□ -0.84
LPP-208ENST00000448637 CAVIN1Q6NZI2 390 aaKnown RBP9.81□□□□□ -0.84
LPP-208ENST00000448637 KDM4AO75164 1064 aa9.81□□□□□ -0.84
LPP-208ENST00000448637 ZNF76P36508 570 aa9.81□□□□□ -0.84
LPP-208ENST00000448637 TNIP1Q15025 636 aa9.81□□□□□ -0.84
LPP-208ENST00000448637 PPP4R3AQ6IN85 833 aa9.81□□□□□ -0.84
LPP-208ENST00000448637 DNAJC2Q99543 621 aaKnown RBP9.81□□□□□ -0.84
LPP-208ENST00000448637 RBM5P52756 815 aaKnown RBP eCLIP9.81□□□□□ -0.84
LPP-208ENST00000448637 IL27Q8NEV9 243 aa9.81□□□□□ -0.84
LPP-208ENST00000448637 CCDC69A6NI79 296 aa9.81□□□□□ -0.84
LPP-208ENST00000448637 FMNL2Q96PY5 1086 aa9.81□□□□□ -0.84
LPP-208ENST00000448637 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.81□□□□□ -0.84
LPP-208ENST00000448637 PPP1R12BO60237 982 aaPredicted RBP9.8□□□□□ -0.84
LPP-208ENST00000448637 L3MBTL2Q969R5 705 aa9.8□□□□□ -0.84
LPP-208ENST00000448637 TSPY26PQ9H489 355 aa9.8□□□□□ -0.84
LPP-208ENST00000448637 NASPP49321 788 aaPredicted RBP9.8□□□□□ -0.84
LPP-208ENST00000448637 RUNDC1Q96C34 613 aa9.8□□□□□ -0.84
LPP-208ENST00000448637 GOLGA6L10A0A0M3HER8 536 aa9.8□□□□□ -0.84
LPP-208ENST00000448637 ANKRD1Q15327 319 aa9.8□□□□□ -0.84
LPP-208ENST00000448637 CCDC30Q5VVM6 783 aa9.8□□□□□ -0.84
LPP-208ENST00000448637 CENPHQ9H3R5 247 aa9.8□□□□□ -0.84
LPP-208ENST00000448637 SPDYE4A6NLX3 237 aa9.8□□□□□ -0.84
LPP-208ENST00000448637 NF2P35240 595 aa9.8□□□□□ -0.84
LPP-208ENST00000448637 SSR1P43307 286 aaKnown RBP9.8□□□□□ -0.84
LPP-208ENST00000448637 C22orf23Q9BZE7 217 aa9.8□□□□□ -0.84
LPP-208ENST00000448637 TMOD2Q9NZR1 351 aa9.8□□□□□ -0.84
LPP-208ENST00000448637 RBM42Q9BTD8 480 aaKnown RBP9.8□□□□□ -0.84
LPP-208ENST00000448637 FAM177BA6PVY3 158 aa9.79□□□□□ -0.84
LPP-208ENST00000448637 PLEKHO1Q53GL0 409 aaPredicted RBP9.79□□□□□ -0.84
LPP-208ENST00000448637 PABPN1LA6NDY0 278 aaKnown RBP9.79□□□□□ -0.84
LPP-208ENST00000448637 CDKL5O76039 1030 aa9.79□□□□□ -0.84
LPP-208ENST00000448637 AEBP1Q8IUX7 1158 aa9.79□□□□□ -0.84
LPP-208ENST00000448637 MIA2Q96PC5 1412 aa9.79□□□□□ -0.84
LPP-208ENST00000448637 ANKRD18BA2A2Z9 1011 aa9.79□□□□□ -0.84
LPP-208ENST00000448637 GPRASP1Q5JY77 1395 aa9.78□□□□□ -0.84
LPP-208ENST00000448637 APAF1O14727 1248 aa9.78□□□□□ -0.84
LPP-208ENST00000448637 TAF3Q5VWG9 929 aa9.78□□□□□ -0.84
LPP-208ENST00000448637 CEP63Q96MT8 703 aa9.78□□□□□ -0.84
LPP-208ENST00000448637 SCLT1Q96NL6 688 aa9.78□□□□□ -0.84
LPP-208ENST00000448637 BRPF3Q9ULD4 1205 aa9.78□□□□□ -0.84
LPP-208ENST00000448637 CCDC18Q5T9S5 1454 aa9.78□□□□□ -0.84
LPP-208ENST00000448637 GAS2L2Q8NHY3 880 aa9.78□□□□□ -0.84
LPP-208ENST00000448637 SSBP05455 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
LPP-208ENST00000448637 ZSCAN29Q8IWY8 852 aaPredicted RBP9.78□□□□□ -0.84
LPP-208ENST00000448637 EXOC6Q8TAG9 804 aa9.78□□□□□ -0.84
LPP-208ENST00000448637 SURF6O75683 361 aaKnown RBP9.77□□□□□ -0.84
LPP-208ENST00000448637 HOMER2Q9NSB8 354 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms